Oncorhynchus kisutch (coho salmon): 109879539
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Entry
109879539 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
109879539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109879539
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109879539
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109879539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-rbx1
zf-RING_10
KH_DTX3L
zf-RING_4
DUF1272
zf-RING_11
zf-C3HC4_4
zf-UDP
DZR_2
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
109879539
NCBI-ProteinID:
XP_020327297
Ensembl:
ENSOKIG00005031222
LinkDB
All DBs
Position
LG8:complement(4138266..4143823)
Genome browser
AA seq
433 aa
AA seq
DB search
MANASLKEVLKVVFSDVILTVDPNTFKDPNQVKYLLTGCGNRVTGTLHYEVRGSFEEIED
LFVKMSSIDRYAAPNLRDSPLRHLQRLRSPSPVKPVAIVGAVWDFIQQRCSKELKRIQGE
DVLIHKLCDKMVVTFESHRKDSVRVHFARERFVTFYQRLATDLKVQTYSLDPQYYKSLQR
QFPELLIEGGPSKDNITVTGRYMHIVMLEDFLRHGSSSPVTSQRPLTPQRVSPRASGTTR
NKQSDDEEEESCPICLDTIKEDRKKTLACKHSFCRGCLEKAFKTKPVCPTCGAVYGELKG
TQPKGGTMAVTQERSSLSGYDKYGTIVIQYHIPSGIQKEEHPNPGQTYQGASRTAYLPDS
SEGRNVLALLKRAFDQRLTFTIGRSSTTGMENMVTWNDIHHKTSRSGGTSCYGYPDPDYL
RRLQDELKVKGIY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgcgtcattgaaagaggtattgaaagtggtattttcagacgtcattctcact
gtagatccgaacactttcaaagatcccaaccaggtgaagtaccttctcactggatgtggt
aaccgcgttacaggaaccttgcattacgaagtgcggggatcatttgaggaaatagaggac
ctgtttgtgaagatgtcaagtatagacagatatgccgcccccaatctcagagacagtcct
cttcgtcacctacagcgtcttcggtcacctagtccagtgaaaccagtggcgatagttgga
gccgtttgggatttcatccaacagagatgctcaaaggagttgaagagaatccaaggggaa
gatgtcttaattcataaactttgtgacaaaatggtggtgacctttgaaagccacagaaaa
gactcggttcgggttcatttcgccagagagcgctttgtcacgttctatcagagactcgct
acagatctgaaagtgcagacttacagtttggatccacaatactacaaaagcttgcagaga
cagtttccagaacttttgattgaaggaggccccagtaaagacaatattacagtgacaggg
cgctacatgcacattgtgatgttggaggattttctacggcacggttccagttcccctgtg
acatcacaacgacccctgacaccccagagagttagcccccgagcctctggtactacacgc
aacaagcaatcggacgacgaagaagaagagtcatgtccgatttgtctggacaccattaaa
gaggacagaaagaagacgttggcatgtaaacactcgttctgtagaggctgtctggagaaa
gcgttcaagaccaaacctgtctgtccaacctgtggggcagtctatggggaactgaagggg
acgcagccaaagggcgggactatggctgttactcaggaaagatcctctttgtctggatat
gacaagtatggaacaatcgtgattcagtaccacattccaagtggaatacagaaggaggag
catcccaacccaggtcagacttaccagggtgcatcacgtacagcgtatctcccagattcc
tcagagggcaggaatgttctggctctcctgaagagggccttcgaccagcgactcacgttc
actattggccgatcttccaccacaggcatggaaaacatggtcacgtggaacgacatccac
cataaaacctccaggagcggaggcaccagttgctatggataccctgaccccgactacctg
agacgtctacaggatgaactgaaggtcaaaggaatctattga
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