KEGG   Oncorhynchus kisutch (coho salmon): 109879568
Entry
109879568         CDS       T09179                                 
Name
(RefSeq) P-selectin-like
  KO
K06495  selectin, lymphocyte
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04514  Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    109879568
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oki04515]
    109879568
   04090 CD molecules [BR:oki04090]
    109879568
   00536 Glycosaminoglycan binding proteins [BR:oki00536]
    109879568
   04091 Lectins [BR:oki04091]
    109879568
Cell adhesion molecules [BR:oki04515]
 Lectins
  Selectins and C-type lectins
   109879568
CD molecules [BR:oki04090]
 Proteins
  109879568
Glycosaminoglycan binding proteins [BR:oki00536]
 Heparan sulfate / Heparin
  Adhesion molecules of cell surface
   109879568
Lectins [BR:oki04091]
 C-Type lectins
  Selectins
   109879568
SSDB
Motif
Pfam: Sushi Lectin_C EGF EGF_Epiregulin hEGF
Other DBs
NCBI-GeneID: 109879568
NCBI-ProteinID: XP_031693883
LinkDB
Position
LG13:complement(6485287..6511344)
AA seq 1410 aa
MDFCSASQQTRSPSSWITLFLLYSIVTMCTRVEGWSYHHSNKTMNWDTARKWCTEHYTDM
VAIQNRGEISHLNSILPRQTNYYWMGIRKVDDVWTWVGTNKTLTKEAENWADGEPNNRGN
NEDCVEMYIKRQADTGKWNDESCMKKKTALCFTASCQSDSCYHGECVETINSHRCKCSEG
FYGEQCEHVVECKMEVTVPAKASVSCSHPNGNFSFDSTCQYSCEEGYRLSSSGPVRCTAS
ESWSEQPPTCELVLCSELYEPGKGSMACSHPLGSFSYLSTCTFTCEEGYERLASSSATLQ
CGASGQWNDSQPQCIAVQCPSPVVPLGGQVSCEAPSHPWGSVCNFSCDEGYDHQGAPNMQ
CSRSGEWSAETPTCTATPEPPLNPTILGLAAGGAVSLSGLSLAAWLLKRIRQKDWALGSG
TCSEKTFTCKRASHFKLTMDFCSASQQTRSLSSWITLFLLYSIVTMCTRVEGWSYHHSNK
TMNWDTARKWCTEHYTDMVAIQNRGEISHLNSILPRQTNYYWIGIRKVDDVWIWVGTNKT
LTKEAENWADGEPNNRGNNEDCVEMYIKRQADTGKWNDESCMKKKTALCFTASCQSDSCY
HGECVETINSHRCKCSEGFYGEQCEHVVECKMEGVTVPAKASVSCSHPNGNFSFDSTCQY
SCEEGYRLSSSGPVRCTASESWSEQPPTCELVLCSELYEPGKGSMACSHPLGSFSYLSTC
TFTCEEGYERLASSSATLQCGASGQWNDSQSQCIAVSCPTLQQPQDGAISCGEDFTYGSS
CNFSCSEGYLLKGAITLTCTSAAEWSEEIPHCEAVQCPSPVVPLGGQVSCEAPSHPWGSV
CNFSCDEGYDHQGAPNMQCSRSGEWSAETPTCTATPEPPLNPTILGLAAGGAVSLSGLSL
AAWLLKRIRQKANKIDLNSTSDIEEPLQTYRNSIDSLIDFCSASQQTRSLSSWITLFLLY
SIVTMCTRVEGWSYHHSNKTMNWDTARKWCTEHYTDMVAIQNRGEISHLNSILPRQTNYY
WIGIRKVDDVWTWVGTNKTLTKEAENWADGEPNTVGNNEDCVEMYIKREADTGKWNDESC
MKKKTALCFTASCQSDSCYHGECVETINSHRCKCSEGFYGEQCEHVVVYLEECLHRGTFS
QLLQSALSSPVVLCSELYEPGKGSMACSHPLGSFSYLSTCTFTCEEGYERLASSSATLQC
GASGQWNDSQSQCIAVSCPTLQQPQDGAISCGEDFTYGSSCNFSCSEGYLLKGAITLTCT
SAAEWSEEIPHCEAVQCPSPVVPLGGQVSCEAPSHPWGSVCNFSCDEGYDHQGAPNMQCS
RSGEWSAETPTCTATPEPPLNCTILCLAAGGAVSIFVLFLAAWLRKRMREKARSEQQLPL
RNLYRPTGTASTASYRVQQQQQEQQLPVFL
NT seq 4233 nt   +upstreamnt  +downstreamnt
atggacttctgctctgcatcacagcaaaccagaagccccagctcatggatcaccctcttc
ctcctgtactcaattgtcaccatgtgcactagagtagagggctggtcctaccatcactcc
aacaaaactatgaactgggacactgctagaaagtggtgcacggagcactacactgacatg
gtggccatccagaaccgtggagagatctcccaccttaacagcatcctgcccaggcagacc
aactattactggatggggatccgtaaggtggacgacgtgtggacctgggtggggaccaat
aagaccctgactaaagaggcagagaactgggcagacggggaacccaacaacagagggaac
aacgaggactgtgtggagatgtacatcaagagacaggcggacacagggaagtggaacgac
gagtcttgtatgaagaagaagacggctctgtgcttcacagcctcgtgtcagagcgactca
tgttaccatggagagtgtgtagagaccatcaacagccaccgctgtaaatgctctgagggc
ttctacggagagcagtgtgaacacgttgttgaatgtaagatggaggtcacggtccctgct
aaagccagtgtcagttgctctcaccccaatgggaatttctcctttgactcgacgtgtcag
tattcctgtgaagaggggtaccggctgagcagctccgggcctgtgagatgcacagcctca
gaatcatggtcagaacagcctcccacctgtgaattggtcttatgcagtgagctgtatgaa
cctgggaagggttccatggcctgctcccatcccctgggctccttcagctacctgtccacc
tgtacctttacctgtgaggagggctatgagaggctggcctccagctctgctaccctgcag
tgtggtgcctcgggacagtggaacgactcacagccgcagtgtattgctgtccagtgcccc
tctcctgtggttcctctggggggtcaggtcagctgtgaggccccctcacatccctggggc
tctgtctgcaacttcagctgtgatgagggttacgatcaccagggggccccaaacatgcag
tgttcacggtcaggggagtggagcgctgaaacacctacctgcacagccacacctgagcct
ccattgaaccccactatcctaggcctggcagcagggggcgctgtgtcattatctggcctg
tctctggctgcatggctcctcaaacgaatcagacagaaagactgggctctgggctctggc
acctgctcagagaaaacatttacctgcaaaagagcatcacattttaaacttacaatggac
ttctgctctgcatcacagcaaaccagaagcctcagctcatggatcaccctcttcctcctg
tactcaattgtcaccatgtgcactagagtagagggctggtcctaccatcactccaacaaa
actatgaactgggacactgctagaaagtggtgcacggagcactacactgacatggtggcc
atccagaaccgtggagagatctcccaccttaacagcatcctgcccaggcagaccaactat
tactggatagggatccgtaaggtggacgacgtgtggatctgggtggggaccaataagacc
ctgactaaagaggcagagaactgggcagacggggaacccaacaacagagggaacaacgag
gactgtgtggagatgtacatcaagagacaggcggacacagggaagtggaacgacgagtct
tgtatgaagaagaagacggctctgtgcttcacagcctcgtgtcagagcgactcatgttac
catggagagtgtgtagagaccatcaacagccaccgctgtaaatgctctgagggcttctac
ggagagcagtgtgaacacgttgttgaatgtaagatggagggggtcacggtccctgctaaa
gccagtgtcagttgctctcaccccaatgggaatttctcctttgactcgacgtgtcagtat
tcctgtgaagaggggtaccggctgagcagctccgggcctgtgagatgcacagcctcagaa
tcatggtcagaacagcctcccacctgtgaattggtcttatgcagtgagctgtatgaacct
gggaagggttccatggcctgctcccatcccctgggctccttcagctacctgtccacctgt
acctttacctgtgaggagggctatgagaggctggcctccagctctgctaccctgcagtgt
ggagcctcgggacagtggaacgactcacagtcgcagtgtattgctgtaagctgccctacc
ctccagcagccacaggatggcgctatcagctgtggagaagacttcacctatggaagcagc
tgtaactttagctgctctgagggttatctcctcaagggggcgatcacgctgacctgcaca
tcagctgctgagtggagtgaggagataccacactgtgaagctgtccagtgcccctctcct
gtggttcctctggggggtcaggtcagctgtgaggccccctcacatccctggggctctgtc
tgcaacttcagctgtgatgagggttacgatcaccagggggccccaaacatgcagtgttca
cggtcaggggagtggagcgctgaaacacctacctgcacagccacacctgagcctccattg
aaccccactatcctaggcctggcagcagggggcgctgtgtcattatctggcctgtctctg
gctgcatggctcctcaaacgaatcagacagaaagctaacaagattgatctgaacagcacc
tcagacattgaggaacctttacagacctacaggaacagcatcgacagcctgatagacttc
tgctctgcatcacagcaaaccagaagcctcagctcatggatcaccctcttcctcctgtac
tcaattgtcaccatgtgcactagagtagagggctggtcctaccatcactccaacaaaact
atgaactgggacactgctagaaagtggtgcacggagcactacactgacatggtggccatc
cagaaccgtggagagatctcccaccttaacagcatcctgcccaggcagaccaactattac
tggatagggatccgtaaggtggacgacgtgtggacctgggtggggaccaataagaccctg
actaaagaggcagagaactgggcagacggggaacccaacaccgtggggaacaacgaggac
tgtgtggagatgtacatcaagagagaggcggacacagggaagtggaacgacgagtcgtgt
atgaagaagaagacggctctgtgcttcacagcctcatgtcagagcgactcatgttaccat
ggagagtgtgtggagaccatcaacagccaccgctgtaaatgctctgagggcttctacgga
gagcagtgtgaacacgttgttgtgtatcttgaggaatgtcttcatcgtggcacatttagt
cagttattacaatctgccctctcctcccccgtggtcttatgcagtgagctgtatgaacct
gggaagggttccatggcctgctcccatcccctgggctccttcagctacctgtccacctgt
acttttacctgtgaggagggctatgagaggctggcctccagctctgctaccctgcagtgt
ggagcctcgggacagtggaacgactcacagtcgcagtgtattgctgtaagctgccctacc
ctccagcagccacaggatggcgctatcagctgtggagaagacttcacctatggaagcagc
tgtaactttagctgctctgagggttatctcctcaagggggcgatcacgctgacctgcaca
tcagctgctgagtggagtgaggagataccacactgtgaagctgtccagtgcccctctcct
gtggttcctctggggggtcaggtcagctgtgaggccccctcacatccctggggctctgtc
tgcaacttcagctgtgatgagggttacgatcaccagggggccccaaacatgcagtgttca
cggtcaggggagtggagcgctgaaacacctacctgcacagccacacctgagcctccattg
aactgcactatcctatgcctggcagcaggaggcgctgtgtcaatatttgtcctgtttctg
gccgcgtggctccgcaaacgaatgagagagaaagctagatctgaacagcaactaccattg
agaaacctttatagacctacaggaacagcatcgacagcctcatatagagtccaacaacaa
cagcaggaacaacaactgcctgtatttttatga

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