Oncorhynchus kisutch (coho salmon): 109879568
Help
Entry
109879568 CDS
T09179
Name
(RefSeq) P-selectin-like
KO
K06495
selectin, lymphocyte
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109879568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109879568
04090 CD molecules [BR:
oki04090
]
109879568
00536 Glycosaminoglycan binding proteins [BR:
oki00536
]
109879568
04091 Lectins [BR:
oki04091
]
109879568
Cell adhesion molecules [BR:
oki04515
]
Lectins
Selectins and C-type lectins
109879568
CD molecules [BR:
oki04090
]
Proteins
109879568
Glycosaminoglycan binding proteins [BR:
oki00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
109879568
Lectins [BR:
oki04091
]
C-Type lectins
Selectins
109879568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sushi
Lectin_C
EGF
EGF_Epiregulin
hEGF
Motif
Other DBs
NCBI-GeneID:
109879568
NCBI-ProteinID:
XP_031693883
LinkDB
All DBs
Position
LG13:complement(6485287..6511344)
Genome browser
AA seq
1410 aa
AA seq
DB search
MDFCSASQQTRSPSSWITLFLLYSIVTMCTRVEGWSYHHSNKTMNWDTARKWCTEHYTDM
VAIQNRGEISHLNSILPRQTNYYWMGIRKVDDVWTWVGTNKTLTKEAENWADGEPNNRGN
NEDCVEMYIKRQADTGKWNDESCMKKKTALCFTASCQSDSCYHGECVETINSHRCKCSEG
FYGEQCEHVVECKMEVTVPAKASVSCSHPNGNFSFDSTCQYSCEEGYRLSSSGPVRCTAS
ESWSEQPPTCELVLCSELYEPGKGSMACSHPLGSFSYLSTCTFTCEEGYERLASSSATLQ
CGASGQWNDSQPQCIAVQCPSPVVPLGGQVSCEAPSHPWGSVCNFSCDEGYDHQGAPNMQ
CSRSGEWSAETPTCTATPEPPLNPTILGLAAGGAVSLSGLSLAAWLLKRIRQKDWALGSG
TCSEKTFTCKRASHFKLTMDFCSASQQTRSLSSWITLFLLYSIVTMCTRVEGWSYHHSNK
TMNWDTARKWCTEHYTDMVAIQNRGEISHLNSILPRQTNYYWIGIRKVDDVWIWVGTNKT
LTKEAENWADGEPNNRGNNEDCVEMYIKRQADTGKWNDESCMKKKTALCFTASCQSDSCY
HGECVETINSHRCKCSEGFYGEQCEHVVECKMEGVTVPAKASVSCSHPNGNFSFDSTCQY
SCEEGYRLSSSGPVRCTASESWSEQPPTCELVLCSELYEPGKGSMACSHPLGSFSYLSTC
TFTCEEGYERLASSSATLQCGASGQWNDSQSQCIAVSCPTLQQPQDGAISCGEDFTYGSS
CNFSCSEGYLLKGAITLTCTSAAEWSEEIPHCEAVQCPSPVVPLGGQVSCEAPSHPWGSV
CNFSCDEGYDHQGAPNMQCSRSGEWSAETPTCTATPEPPLNPTILGLAAGGAVSLSGLSL
AAWLLKRIRQKANKIDLNSTSDIEEPLQTYRNSIDSLIDFCSASQQTRSLSSWITLFLLY
SIVTMCTRVEGWSYHHSNKTMNWDTARKWCTEHYTDMVAIQNRGEISHLNSILPRQTNYY
WIGIRKVDDVWTWVGTNKTLTKEAENWADGEPNTVGNNEDCVEMYIKREADTGKWNDESC
MKKKTALCFTASCQSDSCYHGECVETINSHRCKCSEGFYGEQCEHVVVYLEECLHRGTFS
QLLQSALSSPVVLCSELYEPGKGSMACSHPLGSFSYLSTCTFTCEEGYERLASSSATLQC
GASGQWNDSQSQCIAVSCPTLQQPQDGAISCGEDFTYGSSCNFSCSEGYLLKGAITLTCT
SAAEWSEEIPHCEAVQCPSPVVPLGGQVSCEAPSHPWGSVCNFSCDEGYDHQGAPNMQCS
RSGEWSAETPTCTATPEPPLNCTILCLAAGGAVSIFVLFLAAWLRKRMREKARSEQQLPL
RNLYRPTGTASTASYRVQQQQQEQQLPVFL
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggacttctgctctgcatcacagcaaaccagaagccccagctcatggatcaccctcttc
ctcctgtactcaattgtcaccatgtgcactagagtagagggctggtcctaccatcactcc
aacaaaactatgaactgggacactgctagaaagtggtgcacggagcactacactgacatg
gtggccatccagaaccgtggagagatctcccaccttaacagcatcctgcccaggcagacc
aactattactggatggggatccgtaaggtggacgacgtgtggacctgggtggggaccaat
aagaccctgactaaagaggcagagaactgggcagacggggaacccaacaacagagggaac
aacgaggactgtgtggagatgtacatcaagagacaggcggacacagggaagtggaacgac
gagtcttgtatgaagaagaagacggctctgtgcttcacagcctcgtgtcagagcgactca
tgttaccatggagagtgtgtagagaccatcaacagccaccgctgtaaatgctctgagggc
ttctacggagagcagtgtgaacacgttgttgaatgtaagatggaggtcacggtccctgct
aaagccagtgtcagttgctctcaccccaatgggaatttctcctttgactcgacgtgtcag
tattcctgtgaagaggggtaccggctgagcagctccgggcctgtgagatgcacagcctca
gaatcatggtcagaacagcctcccacctgtgaattggtcttatgcagtgagctgtatgaa
cctgggaagggttccatggcctgctcccatcccctgggctccttcagctacctgtccacc
tgtacctttacctgtgaggagggctatgagaggctggcctccagctctgctaccctgcag
tgtggtgcctcgggacagtggaacgactcacagccgcagtgtattgctgtccagtgcccc
tctcctgtggttcctctggggggtcaggtcagctgtgaggccccctcacatccctggggc
tctgtctgcaacttcagctgtgatgagggttacgatcaccagggggccccaaacatgcag
tgttcacggtcaggggagtggagcgctgaaacacctacctgcacagccacacctgagcct
ccattgaaccccactatcctaggcctggcagcagggggcgctgtgtcattatctggcctg
tctctggctgcatggctcctcaaacgaatcagacagaaagactgggctctgggctctggc
acctgctcagagaaaacatttacctgcaaaagagcatcacattttaaacttacaatggac
ttctgctctgcatcacagcaaaccagaagcctcagctcatggatcaccctcttcctcctg
tactcaattgtcaccatgtgcactagagtagagggctggtcctaccatcactccaacaaa
actatgaactgggacactgctagaaagtggtgcacggagcactacactgacatggtggcc
atccagaaccgtggagagatctcccaccttaacagcatcctgcccaggcagaccaactat
tactggatagggatccgtaaggtggacgacgtgtggatctgggtggggaccaataagacc
ctgactaaagaggcagagaactgggcagacggggaacccaacaacagagggaacaacgag
gactgtgtggagatgtacatcaagagacaggcggacacagggaagtggaacgacgagtct
tgtatgaagaagaagacggctctgtgcttcacagcctcgtgtcagagcgactcatgttac
catggagagtgtgtagagaccatcaacagccaccgctgtaaatgctctgagggcttctac
ggagagcagtgtgaacacgttgttgaatgtaagatggagggggtcacggtccctgctaaa
gccagtgtcagttgctctcaccccaatgggaatttctcctttgactcgacgtgtcagtat
tcctgtgaagaggggtaccggctgagcagctccgggcctgtgagatgcacagcctcagaa
tcatggtcagaacagcctcccacctgtgaattggtcttatgcagtgagctgtatgaacct
gggaagggttccatggcctgctcccatcccctgggctccttcagctacctgtccacctgt
acctttacctgtgaggagggctatgagaggctggcctccagctctgctaccctgcagtgt
ggagcctcgggacagtggaacgactcacagtcgcagtgtattgctgtaagctgccctacc
ctccagcagccacaggatggcgctatcagctgtggagaagacttcacctatggaagcagc
tgtaactttagctgctctgagggttatctcctcaagggggcgatcacgctgacctgcaca
tcagctgctgagtggagtgaggagataccacactgtgaagctgtccagtgcccctctcct
gtggttcctctggggggtcaggtcagctgtgaggccccctcacatccctggggctctgtc
tgcaacttcagctgtgatgagggttacgatcaccagggggccccaaacatgcagtgttca
cggtcaggggagtggagcgctgaaacacctacctgcacagccacacctgagcctccattg
aaccccactatcctaggcctggcagcagggggcgctgtgtcattatctggcctgtctctg
gctgcatggctcctcaaacgaatcagacagaaagctaacaagattgatctgaacagcacc
tcagacattgaggaacctttacagacctacaggaacagcatcgacagcctgatagacttc
tgctctgcatcacagcaaaccagaagcctcagctcatggatcaccctcttcctcctgtac
tcaattgtcaccatgtgcactagagtagagggctggtcctaccatcactccaacaaaact
atgaactgggacactgctagaaagtggtgcacggagcactacactgacatggtggccatc
cagaaccgtggagagatctcccaccttaacagcatcctgcccaggcagaccaactattac
tggatagggatccgtaaggtggacgacgtgtggacctgggtggggaccaataagaccctg
actaaagaggcagagaactgggcagacggggaacccaacaccgtggggaacaacgaggac
tgtgtggagatgtacatcaagagagaggcggacacagggaagtggaacgacgagtcgtgt
atgaagaagaagacggctctgtgcttcacagcctcatgtcagagcgactcatgttaccat
ggagagtgtgtggagaccatcaacagccaccgctgtaaatgctctgagggcttctacgga
gagcagtgtgaacacgttgttgtgtatcttgaggaatgtcttcatcgtggcacatttagt
cagttattacaatctgccctctcctcccccgtggtcttatgcagtgagctgtatgaacct
gggaagggttccatggcctgctcccatcccctgggctccttcagctacctgtccacctgt
acttttacctgtgaggagggctatgagaggctggcctccagctctgctaccctgcagtgt
ggagcctcgggacagtggaacgactcacagtcgcagtgtattgctgtaagctgccctacc
ctccagcagccacaggatggcgctatcagctgtggagaagacttcacctatggaagcagc
tgtaactttagctgctctgagggttatctcctcaagggggcgatcacgctgacctgcaca
tcagctgctgagtggagtgaggagataccacactgtgaagctgtccagtgcccctctcct
gtggttcctctggggggtcaggtcagctgtgaggccccctcacatccctggggctctgtc
tgcaacttcagctgtgatgagggttacgatcaccagggggccccaaacatgcagtgttca
cggtcaggggagtggagcgctgaaacacctacctgcacagccacacctgagcctccattg
aactgcactatcctatgcctggcagcaggaggcgctgtgtcaatatttgtcctgtttctg
gccgcgtggctccgcaaacgaatgagagagaaagctagatctgaacagcaactaccattg
agaaacctttatagacctacaggaacagcatcgacagcctcatatagagtccaacaacaa
cagcaggaacaacaactgcctgtatttttatga
DBGET
integrated database retrieval system