Oncorhynchus kisutch (coho salmon): 109879586
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Entry
109879586 CDS
T09179
Name
(RefSeq) nucleolar transcription factor 1-like isoform X4
KO
K09273
upstream-binding transcription factor
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109879586
03021 Transcription machinery [BR:
oki03021
]
109879586
Transcription factors [BR:
oki03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
109879586
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
109879586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109879586
NCBI-ProteinID:
XP_020327344
Ensembl:
ENSOKIG00005034233
LinkDB
All DBs
Position
LG6:82855033..82880056
Genome browser
AA seq
749 aa
AA seq
DB search
MNGEMDTSTKDQGEIIVNQREIIVVNQVWTQDDLLNLLEAMKVNLPQKDLAKYKTSESHL
DWEKVAFNSFTGEMCKQKWNEVSKVIRKFRTLTELIFDAQDFIKNPYKGKKLKKHPDFPK
KPLTPYFRFFIEKRAKYAKLHPEMSNLDLTKILSMKYRGLPEKKKKKYLEDFQKDKETFG
HSMSKFREDHPDLVESMAKKGSNVPEKPRTPQQLWYSHEKKAFLKTHADATTKDIKDSLG
KQWTQLSDKKRLKWIAKSLEMHKAYEEVMKGFIETHPELNMSNEDIVKSTLTKAERHLKD
KSDGRPDKPPPNGYSMFCAELMSSMKDVPSTERMVMCSQQWKLLKQNEKDGYQKRCEQRK
KEYEVEMNRFLCSISEEEQQRVLGEQKMIGFKKGSGGSKKKSRAKPGPEKPKRPISAMFI
FSEEKRPKLQQERPDLSDSELTRLLARMWNELSDKKKEKYKRLETVLKAESVKKGQEERS
RLPDTPKTAQDIWQQSVIGDYLARFKNDRPKAQKAMEATWNTMEKKEKIMWIKKAAEDQK
RYERELSEMRSPATIIASGKKMKFDGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMGE
IGGRWQRQPQKEKDRYKKIAEEKQKLYKVELERWLASLSSQERNVYKEYNSQKRKTPVKP
GGTAAKVKAKVIKKSDTEDDDDEEEEKEAASSDNDSSSAEDSEEEDDDDDDDNEEDDDDD
DEAEDKENKSEGSSSSDSSSVATSDSDSD
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaatggacacgtccactaaagaccaaggtgagatcatagtcaatcaacgt
gagatcatagtagtcaatcaagtgtggacacaggacgaccttctgaatctgctagaggcc
atgaaagtcaatcttccccagaaggacctggccaagtacaagacgtcggagtcccatctg
gactgggagaaggtggccttcaactcattcacaggagagatgtgcaaacagaagtggaac
gaggtctccaaagtgatccgtaaatttcgcacattaacagagctgattttcgatgcccaa
gacttcatcaagaacccgtataagggcaagaagctgaagaagcatccagatttccctaag
aagcccctgacgccatatttccgcttcttcattgagaagagggccaagtatgccaagctg
caccctgagatgagcaacctagacctcaccaagatcctctccatgaagtacagagggctg
cctgaaaaaaagaagaaaaaatatctagaagacttccagaaagacaaagaaacgtttggg
cacagcatgtcaaagttcagggaggaccatcccgacctggtggagagcatggcaaagaaa
ggttctaatgtgccagagaaacccaggacgcctcagcagctatggtacagtcacgagaag
aaggccttcctcaaaacacacgcagacgcgaccaccaaagacattaaagacagtcttggg
aagcagtggacacagctgtcagacaaaaagagactcaagtggattgccaagtccctggag
atgcacaaagcatatgaggaggtgatgaagggcttcattgagactcacccagagctcaac
atgagcaacgaggacatcgtcaagtccaccctcaccaaggctgagagacatctgaaggac
aaatctgatggtaggccagacaaaccacccccgaatggttactccatgttctgtgctgag
ttgatgtccagtatgaaggacgtgcccagtacagagcggatggtcatgtgcagccagcag
tggaagctgctgaaacagaacgagaaggacggctaccagaaacgctgcgagcagagaaag
aaagaatacgaagtcgagatgaaccggtttctttgtagtatatcagaggaggagcagcag
cgtgtgctgggagagcagaagatgattggctttaagaagggcagcgggggcagcaaaaag
aagagcagagcaaagcctggcccagagaagcccaaaaggcccatctcggccatgttcatc
ttctctgaagagaaacgtcccaagctgcagcaagagcgaccagacctgtctgacagtgag
ctcaccaggctgctggcacgcatgtggaacgagctctcagataagaagaaggagaagtac
aagcgccttgagacggtcctgaaggcagagtctgtgaagaagggacaagaggagcgcagc
cggctgccagacacccccaagactgcacaggacatctggcagcagagcgtcataggagac
tacctggccaggttcaagaacgaccggccaaaagcccagaaagccatggaagccacttgg
aacaccatggagaagaaggagaagatcatgtggatcaagaaggcagctgaggaccagaaa
cgatacgagagggagctgagtgagatgcgctctcctgcaaccatcattgcctcagggaag
aagatgaaatttgacggtgaacccaagaaacccccttcgaatggctaccagaagttctct
caggagatgctgtccaacggagagctgaaccacctccctatgaaggagcgcatgggggag
atcgggggccgctggcagaggcagccccagaaggagaaggaccgctacaaaaagatcgct
gaggagaaacagaagctgtacaaagtagagctggagcggtggctggcgagtttgtcctca
caagaaagaaatgtgtacaaggagtacaactcacaaaaaagaaaaaccccagtgaaacca
ggaggcactgcagccaaagttaaggccaaggtaatcaagaagtcggacacagaggatgat
gatgacgaggaggaagagaaggaggctgcctcatcagataacgattcttccagtgcagag
gacagtgaggaggaagatgatgatgatgacgatgataatgaggaagatgatgacgatgat
gatgaggcggaggataaagagaacaagtcggaggggagtagcagcagtgactcgagctca
gtggcgacatcggactctgattcagactga
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