Oncorhynchus kisutch (coho salmon): 109879590
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Entry
109879590 CDS
T09179
Name
(RefSeq) rab11 family-interacting protein 1-like isoform X4
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109879590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109879590
Membrane trafficking [BR:
oki04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109879590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
109879590
NCBI-ProteinID:
XP_020327363
Ensembl:
ENSOKIG00005003133
UniProt:
A0A8C7CNH4
LinkDB
All DBs
Position
LG3:complement(28287253..28303523)
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AA seq
683 aa
AA seq
DB search
MSLADQSQQWYPTSVQVTVFQARNLRIKGKNGTNDAYAIMQVAKDKFSTSVAEKCVAPVW
KEEATFDLPLFHHGNAERCTLYIIVMHRALVGLDKLLGRAVINLLDLHDNSARKKTDWYK
LLDKNGKEDKVRGEVMMDIQFMRNNLTASMFDLSMQDKPRSRIGKLKDKVRGKKKDSFSD
SASAIVPSFSQVVTDSEGEADSHSVCPESPGAKKKSKLKSLFAPKSNLQRNVSQSMSTLG
TLPEKNASLGGSRSSGLNVDSPDVKKKFKFLGHKRTGSNDSKVSTGPFSLLGRSKQKEDP
NSTCINGNHVYAEEVEPMSGSTLSLNSSGQGSVEDVRSHRQPSDAALDSLKVAPVNTYRK
ESADRDRALLEQRRLQEEGEKRQAEEKRHNEEKQRVQLKVLQEEERKKQEEQERRFQEDE
ARRKKQEEEEEDRKRLAEERRRLKAGELQRLGEEQRQQEEAKKAEEQKQQEEASVTERLS
SLFGMIRKKEEKKEELQQSVANDVRPNSSPSHSTRDLEVPVPAPRHAANPFKDILLSPDL
PIPFEESPVDHQKGVCGTNTPSAAVFNSNRTAKVSAVKPRPHPVKPMSSMESHALINTPV
VREMKTYDSSLGNMKAPGKVESGPYTQLTQEELITLVVKQQTELSKKDFKIVELEEYIDN
LLVRVIEEKPSILQGLNSPKHAL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggctgaccaaagtcagcagtggtatcccacaagcgtgcaggtgaccgtgttc
caagccaggaatttgaggatcaaaggaaagaatggaaccaacgatgcctatgccatcatg
caggtggccaaagacaagttttctacctcggttgccgaaaaatgtgtcgcaccggtatgg
aaggaagaggcaacgtttgacctgccactgttccaccatggcaatgctgaacgctgcaca
ctatacatcatagtaatgcacagagctctggtgggactggacaagctcctgggacgagct
gtgatcaacctacttgatctacacgataacagcgcccgcaaaaagaccgattggtacaaa
ctgctggataagaatggaaaggaggacaaggtcagaggggaagtgatgatggacatccag
ttcatgagaaacaacttaacagccagcatgtttgacctttccatgcaagacaaaccacgc
tcccgcatcggaaagctgaaggacaaagtgcgtgggaaaaaaaaggacagcttctctgac
tcggcctctgcaatagtgccctctttcagccaggtagtcactgacagcgagggagaggct
gactcccactcagtgtgcccagagtcccctggggccaagaaaaaatccaagctcaagtcc
ctctttgcccctaaatccaacctgcagcgcaatgtctcccagtccatgtccacgctgggc
actcttcctgagaagaacgcgtccctcggtggcagtcgctcttctggcctcaatgtggat
tctcctgatgttaaaaagaagttcaagttcctgggccacaagcgcacaggcagcaatgac
agcaaagtgtctacaggacctttttctcttctgggcagatccaagcagaaagaagacccg
aacagcacgtgcatcaacggcaatcatgtgtatgcagaggaggtagaacccatgtctggg
tccaccctcagccttaacagctctggtcagggctcagtggaggatgtacgaagccacagg
caaccatctgatgccgccttagactccctcaaggtcgcccctgtcaacacctacagaaag
gagtctgcagatagggatagggctctgctggagcaaaggcgccttcaggaagagggagag
aagaggcaggctgaggagaagagacataatgaggagaaacaaagagtgcagctcaaggta
ctgcaggaggaggaacgcaagaaacaggaggagcaggagagaaggttccaggaggatgag
gcaaggaggaagaagcaggaggaagaggaagaggaccggaagcggctagcggaagaaaga
aggcggctgaaggcgggtgagcttcagaggctgggggaggagcagaggcagcaggaggag
gccaagaaggcagaggagcagaaacaacaggaggaggcctctgtgactgagaggctgtcc
tctctgtttggtatgatcaggaagaaggaggagaagaaggaagagctgcagcagagtgtc
gccaatgacgtgaggcccaactcatctcccagtcacagcaccagagatttggaggtccct
gttcctgcccctcgccatgctgctaacccattcaaggatattctgctcagtccagacctt
ccaatcccatttgaggagagcccagtggaccaccagaagggtgtttgcggcaccaacacc
ccgagcgctgcagtcttcaactccaaccgcactgccaaggtgtctgcagtcaagcccagg
cctcacccagtgaagcccatgagctccatggagagccatgctctcatcaacaccccagtg
gtgagagagatgaagacctatgacagctcactgggaaatatgaaggcaccaggtaaggtg
gagagtgggccatacacccagctgacccaggaggagctgattaccctggtggtgaagcag
cagacggagctctccaagaaggacttcaagatcgttgagttggaggagtacatagacaac
ctgctggtgcgtgtcatcgaggagaagcccagcatcctgcaaggcctcaactctcccaag
catgccctgtaa
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