Oncorhynchus kisutch (coho salmon): 109879630
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Entry
109879630 CDS
T09179
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109879630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109879630
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109879630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
109879630
NCBI-ProteinID:
XP_020327386
Ensembl:
ENSOKIG00005003326
UniProt:
A0A8C7CSL0
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All DBs
Position
LG3:complement(28373073..28431874)
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AA seq
371 aa
AA seq
DB search
MALTVNLIGPSPWGFRIYGGRDFKKVITVSKVNGGSKAELAALQPGDVILEINGENTVDM
LNVEAQNKIKNSKTQLQMLVERPEPPIPEQTNGTTTPEQLTGRFQEAVLVSRDENQNYRG
YSISSPASLSPGLYSPEAPSSPEGKRERLSPTGTKSIQLRSWSPEEKTSSHRLSRPLSQE
FSSPDFRTNSVTSRTPTPPGHYSPHSPIDRELSVSPRRSSGSDFAMQRFDRDSEVYKMIQ
ENKESRTAPRQSNTFRMLQEVLESDEKEATVRFPGLSPKPTPPKPTSPGGGVPKYHTCEK
CGTSIVTQAVRIMDDRFRHPECYTCSTPECGLNLKMRGHFWVGEEMFCEKHARENYQGLG
TVPCATVSPRH
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacagtaaacctgattggtccgtctccatggggctttagaatatacggagga
agagacttcaagaaggtgataacagtttccaaggtcaatgggggcagcaaggcagagttg
gccgccctgcagcctggtgatgtcatcctggagatcaatggagagaacacagtggacatg
ctcaatgtggaggcccagaacaagatcaaaaactcaaaaactcagctgcagatgctcgtg
gagaggcctgagccccccatccctgaacagaccaatggaaccaccaccccagaacagctc
actggacgcttccaggaggcggtactggtgagtcgagatgagaaccagaactacagaggg
tactccatctccagcccagcctctctgtcacctggactctactccccagaggctccgtcc
agtcctgagggaaagagagagaggctctcacccaccggcaccaagagcatccagctgcgt
tcgtggtctccagaagagaagacatcgagtcacagactgtccagaccactgtcacaggag
ttctcttctccggacttcaggactaactctgtgaccagtcgaacccccacccctccagga
cattactcgccccatagccctattgaccgcgagctgtctgtctcccccagacgcagttct
ggctcggactttgccatgcagcggtttgaccgggattcagaggtctacaagatgatccaa
gagaacaaggagtcccgcacggcccctcgacagtccaacaccttccgcatgctgcaggag
gttctggagtctgatgagaaggaggcaactgtgcggttcccaggactctcgcccaaaccc
acccctcccaaacccacatcacccgggggcggagtccccaagtaccacacctgtgagaag
tgtggcaccagcattgttacacaggcagtgcgcatcatggacgaccgcttccgccaccca
gagtgctacacctgttctacaccagagtgcggactcaacctgaagatgcgaggtcacttc
tgggtgggagaggagatgttctgtgagaagcatgcccgcgagaattaccagggccttggc
actgtcccctgtgccaccgtctcaccccgccactga
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