Oncorhynchus kisutch (coho salmon): 109879662
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Entry
109879662 CDS
T09179
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109879662
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109879662
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109879662
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109879662
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109879662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
109879662
NCBI-ProteinID:
XP_031648591
Ensembl:
ENSOKIG00005011391
LinkDB
All DBs
Position
LG16:48398581..48427037
Genome browser
AA seq
2595 aa
AA seq
DB search
MTVTTRGSPVGGNDSQGQAPADSQSQPPPTQAQAVSPNPSTTEPSPVSPPAAEEEQGQGD
SAPALEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEA
CQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIITNTHRLVELCVTKLPQDWFPLLELLA
TATNPHCKFHIYNGTRPSETIPAGATLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQ
TLHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELK
KEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNAL
NEVNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEK
ILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKES
WTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKI
LDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLSAYMETMRPFSKAEHADFDPQTVRVGSRYSHVQEV
QERLNFLRFLLKDGQLWLCAPQAKQIWRCLAESAVFLCDREACFKWYSKLMGDEPDLDPD
INKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYL
WRVVIQGTDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQLCFDRLKASYDTLCVLD
GDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERSILPMSRAFRGKHITLIVRFPN
QGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGEVVDPADDRKLIGQLN
LKDKALITAKLTQVSATVPSSPDSSSDSSTGSPSNHGNHFSEGPNPEVEGCLPGVIMSLH
LRYISFLWQVADLGCTLNMPLLRDGARLLMKLMPPDNGTMENLRAICLDHAKLGENSLSP
TLDSRFFGPSPSQVLYLTEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLSMLTRNN
FLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTSPASPINQATHDQ
ALVLQSALQNIPNPASECMLRNVAIRLAQQISDESLPPNAQNFFQASKYIPDLCVIRAVQ
KIVWASGCGTVQLVFSSNEEISQIYEKTNAGKEPDGEDEMVCCEALEIMTLCFALLPTAL
DTLSKEKAWQTYIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEALLNNEIDWLKKIRDEVKRTGETGVE
ETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYVKSGEF
PTEQAIPVCSSPASINAGFELLVALPVGCVRNLKQIVDTLTDMYYLGCEALTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGVLAVEGTGTDVDDELSGDEKQENE
TNADGTARDEVFAYQHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVPRG
FWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKAMGHSSMLSKVLGGSFADQKICRD
CPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLI
KKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDGNPESQM
IMQNEPSEPDPPGCSSKYLLVGVLVHSGQASGGHYYSYISQRDGGTGGSADSGQKERWYK
FDDGDVTECKMDDDEEMKSQCFGGEYMGEVFDHMMKKMSYRRQKRWWNAYILFYERMDAA
GGGAAVEADGELARCISELTVSPTTPRQVMMPGAIECSVRKQNVQFMHSRMQYSLEYFQF
VKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISIQLAARFLFSTGFHTKKVVRGPAGDWYD
ALCILLRHSKNVRCWFAHNVLFAYPTRFSEYLLECPSAEVRGAFAKLIVFIAHFSLADGP
CPAPASSPDGSTQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQFFNLFVMYANLGLAE
KTQLLKLSVPATFMLVALDEGPGPPIKYQYAELTKLYAVVSQLLRCCDVSTRMQSSINGN
PSLANPYGDANLTTPIMPLQQLVSEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQ
FSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDT
IQRSKNHYQKRAYQCIKCMVALFSNCTVAYQILQSNGDLKRKWTWAVEWLGDELERRPYT
GNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEVRKEPDDQEATEDHD
SSPPEDTALYPHNPAPATQFQQQNNHPHAQPYTGPAAQHMNTPQRPPQRAQESWESTTEE
VGPVAPPPAVQTTKE
NT seq
7788 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaccacccgtggctcccccgtggggggcaatgatagccagggccaggcaccc
gctgattctcagagccagcccccacccacacaggcccaggcggtgtcccccaacccgtcg
accacggagccgtctcctgtgagcccaccggcggcggaggaggagcagggccaaggagac
tctgcccctgctctggaggaggaggagcctgccttccctcacactgacctggccaagctg
gacgacatgatcaacaggccccgatgggtagtcccagtcctgccaaagggggaattagaa
gttctacttgaagctgctatagacttatgtaaaaaagggcttgatgtgaagtgtgaggcg
tgccagaggtttttcagggacggcctgaccatctccttcactaagatcctcacagacgag
gctgtcagcgggtggaagtttgagatccataggtgtatcatcaccaacacacaccggctg
gtggagctgtgtgtgaccaagcttccacaggactggttccccttactggagctactggcc
acagccaccaacccccactgcaagttccacatctacaacggcacgcggccctctgagacc
atccccgccggggccacgctggccgacgacgagctcttcgcccgcccacccgaccctcgc
tcacccaagggctggttggtggacctgattaataagtttggcacgctgaacgggtttcag
actctacacgaccgcttcatgagcgggcaggcactcaacgtacagatcatcgctgccctc
atcaagccgttcggccagtgctatgagttcctgaccttgcacacagtgaagaagtacttc
ctgccagtgatcgagatggttcctcagttcctggagaatctgacggatgaggagctgaag
aaggaggccaagaacgaggccaagaacgatgccctgtccatgatcatcaagtccctgaag
aacctggcctccagggtgcctggtcaggaggagactgtcaagaacttggagatatttcgg
ttgaaaatgatccttaggttattgcagatttcctcgttcaacggcaagatgaacgctctg
aatgaggtcaacaaggtcatctccagcgtgtcctactatacgcatcggcatggcaacccc
gaggaggaggagtggctgacggcagaacgcatggcggagtggatccagcagaaccacatc
ctctccatcgtgctgagggacagcctccaccagcctcagtacgtagagaaactagagaag
atactccgcttcgtcatcaaggagaaagccctcaccatgcaggacctggacaacatctgg
gcagcgcaggctggtaagcacgaagccattgtgaagaacgtccatgaccttctggccaaa
ctggcctgggacttctctccagagcagctcgaccatctctttgattgcttcaaggaaagt
tggacaaatgcgagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcg
gaggacgataaggatggagtgatggcccacaaggtgctcaacctgctgtggaatctggct
cacagtgacgacgtccccgtggacatcatggaccaggccctcagcgcacacatcaagata
ctggactacagctgctctcaggacagagacacccagaagatccagtggatagaccgcttc
atcgaggagctgcgcaccaacgacaagtgggtcataccagccctgaagcagatcagagag
atctgcagcctgtttggggaagctcctcagaacctcagtcagacccagaggagtcctcat
gtgttctatcgtcatgacctgatcaaccagctgcagcacaaccatgccctggtcactctg
gtggctgagaacctgtctgcctacatggagaccatgagaccgttctccaaagctgaacac
gcagactttgaccctcagacggtcagagtgggaagtcgctacagtcatgttcaggaggtt
caggagaggctcaacttcctgaggttcctgttgaaggacggacagttgtggctatgtgct
cctcaggccaagcagatctggaggtgtctggctgagagcgccgtcttcctgtgtgaccgg
gaggcgtgcttcaaatggtactctaagctaatgggagatgagccagacctggacccggac
atcaacaaggacttctttgagaacaatgttctgcagctggacccgtccctgctcacggag
aatggcatgaagtgcttcgaaaggttcttcaaggctgtcaactgccgcgagggcaaactg
gtggccaaacgcagggcctacatgatggatgacctggagctcataggactggactacctc
tggagggtggtgatccagggtactgatgacatcgccagccgagccatcgacctgctgaag
gagatatacaccaacctggggcccaagctgcaggtcaaccaggtggagatccacgaggac
ttcatccagttgtgttttgaccgtctgaaggcgtcgtacgacacgctgtgtgtcctggac
ggggacaaggacagcatcaactgtgcccggcaggaggccatccgcatggttcgtgtgctc
accgtgctcaaggagtacatcaacgaatgtgacagcgactaccacgaggagaggtccata
ctccccatgtccagggcgttccgggggaagcacatcacgttgatcgtgcgtttccctaac
cagggtcgtcaggtggatgacctggacatctggtctcacaccaatgacaccatcggctcg
gtgcgccgcggcatcctcacacgcatcaaggccaacgccacgcacaccaagatagagctc
ttcattggcggggaggttgtcgacccagcggatgacaggaagctgattggacagctcaac
ctcaaggacaaagcattgatcacagccaagctgacccaggtgagtgccaccgtgccctcc
agtcctgacagctcctcagactcctccaccggctcacccagtaaccatggcaaccacttc
agcgaagggcccaacccagaggtggagggctgcctgcctggagtgatcatgtctctccac
ctgcgctacatctcgttcctgtggcaggtagcagacctgggctgtaccctcaacatgcct
ctgctgcgagatggagccaggctcctcatgaagcttatgcctccagacaacggtaccatg
gagaacctgcgcgctatctgtctggatcatgccaagctgggagagaacagcctgagcccc
acactggactcccgcttctttggcccctcgccctcacaagtcctctacctcactgaggtg
gtgtatgcattgctgatgccggccagcggcaccctcggcgaggacgccagcgacttccag
tacaacttcctgaagagcggcggcctcccactcgtactgagtatgctcaccaggaacaac
ttcctgccgtcggccgacatggagacgcggcggggggcgtacctcaatgccctgaagatc
gccaagctgctgctgaccgccgtggggttcggacacgtcaaagctgtggccgaggcctgc
cagcccgtagtggaggggaccagccctgcatcgccgatcaaccaggcgacccacgaccag
gccctggtcctccagagtgctctacagaatatcccgaaccccgcctcggagtgcatgctc
cgcaacgtggccatacgactggcccaacagatatctgacgagtctctgcccccgaacgcc
cagaacttcttccaagcatccaagtacatcccagacctctgtgttatccgggcggtgcag
aagatcgtgtgggcttcaggctgtggcacggtacagctggtcttcagctctaatgaagag
atcagtcagatctatgagaagacgaacgcgggtaaggagccggacggggaggatgagatg
gtgtgctgtgaggcactggagatcatgaccctgtgttttgccctgctgcccaccgctctg
gacactctcagtaaggagaaggcctggcagacttacatcatagacctgctactgcactgc
cacagcaagtcagttcgtcagatggctcaggaacagttcttcctcatggccactaggtgc
tgtatgggacacagacccctcctcttcttcatcaccctcctcttcaccgtcttagggagc
acggcaaaggagagggcgaagcacgcaggggactactttacgctgctgaggcacctgctg
aactacgcctacaacagcaacatcaacctgcccaacgctgaggcgctgctcaacaatgag
atcgactggctcaagaagatcagggatgaggtgaagcggacaggagagacgggggtggag
gagaccattctagaaggtcacttgggggtcaccaaggagctgctggccttccagacacca
gagaagaagtactacattggctgtgagaagggcggggccaacctcataaaggagttgata
gatgacttcatcttcccggcatctaacgtgtacctgcagtacgtgaagagtggagagttc
cccacggagcaggccattcctgtctgtagcagccccgcctccatcaacgccggcttcgag
ttgttggttgctctgccggtcggctgtgtccggaacctcaagcagatcgttgatacactc
acagatatgtactacctaggttgtgaggctctgaccgagtgggaatacctccccccagtg
gggccacggcccaccaaaggctttgtggggctgaagaacgcgggggccacctgctacatg
aactcggtcatccagcagctctacatgatcccgcccatccgtaacggtgtcctggccgtg
gagggcaccggcaccgacgtggacgatgaactgtccggggacgagaagcaggagaacgag
actaatgcagacggaacggcgcgggacgaggtgttcgcctaccaacaccagtttgacgac
aagccctcgctgagtaagtctgaggacaggaaggagtacaacattggggtgctacgccac
ctacaggtcatctttggtcacctggcctcctcccgactgcagtactacgtaccccgaggc
ttctggaaacagttcaggttatggggtgagccggtgaatctgcgagagcagcacgatgcc
ctggagttcttcaactctttagtggacagtctggatgaggctctgaaggccatgggccac
tcctccatgctcagcaaggtgcttggaggttcctttgccgaccagaaaatctgccgtgac
tgcccacacaggtatgagtgtgaagagtcattcaccacgttgaacgtggacatcaggaac
caccagaacctgctggactctatggagcagtacgtcaaaggagacttgctggagggagcc
aacgcataccactgtgagaagtgtaacaagaaggtggacacagtgaagcgtctgctgatc
aagaagcttcctccagtgctggccatccagctgaaaaggtttgactacgactgggagagg
gagtgtgccatcaagttcaacgactactttgagttccccagggagctggacatggagccc
tacactgtggccggggtggcaaagctggagggagatgacggcaacccggagagccagatg
atcatgcagaacgaaccatcggaacccgacccaccaggctgcagttctaagtacctcctg
gtgggggtgctggtgcactcaggccaggccagcggcggccactactactcctatatcagc
cagcgagacggtggcaccggcggtagcgccgacagcgggcagaaggagcgctggtacaag
tttgacgacggtgacgtgacggagtgcaagatggacgacgacgaggagatgaagagccag
tgcttcgggggggagtacatgggagaggtgtttgaccacatgatgaagaagatgtcctac
aggaggcagaagagatggtggaacgcctacatcctgttctatgagaggatggacgcggca
gggggaggggccgcagtggaggcagacggagagctggccaggtgcatctcagagctgact
gtgtctcccactacaccacgacaggtgatgatgccgggggccattgaatgcagtgtgagg
aagcagaacgtccagttcatgcacagccgcatgcagtacagcttggagtacttccagttc
gtcaagaagctgctgacctgcaacagcgtctacctcaaccctcccccgggtcaggaccac
ctgctgccagaggcagaggagatagccatgatcagcatccagctagcagctaggttcctc
ttcagcactgggtttcacaccaagaaagtagtccgggggcccgccggtgactggtatgat
gccctgtgcatcctgctgcgccacagtaagaacgtccgctgctggtttgcccacaacgtt
ctgtttgcgtaccccacgcgcttctctgagtacctgctggagtgtcccagtgccgaggtc
cggggggccttcgccaaactcatcgtcttcatcgcccacttctccctggcggacgggcca
tgccccgcccccgccagctcccctgacgggtccacacagggctgtgataacctgagtctg
agtgatcacctgttgagggcagtgttgaacctgcttaggagagaggtgtcagagcacggc
cgacacctgcagcagttcttcaacctcttcgtcatgtacgccaacctgggtctggcagag
aagacccagttgttgaagctgagtgtccctgctaccttcatgctggtggctctagacgag
gggcctggccctcccataaagtaccagtatgcagaactgaccaagctctacgctgtggtc
tcccagctactgcgctgctgtgacgtctccacacgcatgcagtcgtccatcaatggtaac
ccgtccctggccaacccgtatggagacgccaacctgaccacccccatcatgcccctgcaa
cagctggtgtcagagatcctcttcgttaggaccagctatgtgaagaagatcatcgaggac
tgcagcaactctgaggagacggtcaagctgctgcgcttcagctgctgggaaaacccccag
ttctcctctaccgtgctgtctgagctgctctggcaggtggcgtactcttacacgtatgag
ctgaggccttacctggacctgctgctgcagatactgctgatagaggactcctggcagacc
cacaggatccacaacgtgctgaagggtataccagacgacagggacggcctgtttgacacc
attcagcgctctaagaaccactaccagaaacgggcctaccagtgtatcaagtgcatggtg
gctctgttcagcaactgtactgtggcctaccagatactacagagtaacggggacctgaag
cgtaagtggacgtgggcggtggagtggctgggggacgagctggagaggaggccctacaca
gggaacccccagtacacctacaacaactggtctccccccgtccagagcaacgagacctcc
aacgggtacttcctggagcgctcacattccgcacgcatgaccctggccaaggcctgtgaa
ctttgccctgaggaggtacggaaggagccagatgatcaggaggcaacagaagatcacgac
tcctcccctcccgaggacacagcgctgtacccccataaccctgctcctgccacgcagttt
cagcagcagaacaaccacccccacgcccagccctatacgggtccggctgcccagcacatg
aacacgccccagcggcccccacagagagcacaggagagctgggagagcaccacagaggag
gtggggcccgtggcgcccccacccgctgtccagacgacaaaagagtaa
DBGET
integrated database retrieval system
