Oncorhynchus kisutch (coho salmon): 109879691
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Entry
109879691 CDS
T09179
Name
(RefSeq) contactin-5-like
KO
K06761
contactin 3/4/5/6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109879691
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oki00537
]
109879691
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
Contactins
109879691
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oki00537
]
Others
109879691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Pur_ac_phosph_N
Sp38
fn3_4
Interfer-bind
YejG
Motif
Other DBs
NCBI-GeneID:
109879691
NCBI-ProteinID:
XP_031652797
Ensembl:
ENSOKIG00005028573
LinkDB
All DBs
Position
LG18:528493..765952
Genome browser
AA seq
982 aa
AA seq
DB search
MMSCEARGNPAPAYSWFINGTEVDIEAVYRYSLIDGNLIITNASETADYGRYQCKAENSY
GTVLSRDALLQFTYLGSFSGRTRGGVSVREGQGVVLMCTPPPHSPEIIYTWVFNEFPSFV
AEDSRRFISQVTGNLYVSKVQPSDVGSYICLVKNTVTNARVLSPPTPLTLRTDGIMGEYE
PKIEVHFPQSVLAARGVTVSLECFALGNPVPTITWRKMNGNIPKKARLRKSQAVLEIPNV
QLEDSGTYECKAENPRGGTAFKGHIQIYTFPQWISTINDSQLDSGDQLHWECKATGIPRP
TYRWLRNGELITPQSRVEMVNGELIIQKVQQADSGMYQCVAENKYGAIYCSAELTILASP
PVFSLKPVRLIATLGKDVLLECKPRASPKPRVTWRRGDRRIHPSRRIMLLRNNTLRIINS
SRSDEGDYVCRAENQFGSAEMTAMLRVKEAMHVELSPCKVEVTVGESVVLSCKVSHDPSL
DVAFQWLLNQQPLNFQQEGGHFEYIQRQSSTVDLMIRSILLQHAGKYSCRAQTSADTLFA
EAEVLVRGPPGPPGVVIVEEITDTTATLSWSGGVDNHSPISSYNLQARSPFSLGWQTLRT
DPEPVTGDMESAMAVDLNPWVDYEFRVVASNAIGTGDPSAPSRGVRTKEAVPSVAPANVS
GGNGRRHELVTSWEPVSEEFQNGEGFGYIVAFRANGTRGWKEKMVTSADSTTYKYRDETF
PPLTPFEVKVGVYNNKGDGPFSGVVTVYSAEGEPRDAPSEVKASSISSKEIKVTWRQINP
GPGRPRGYEVSYRKDSEQEESGKKKKTAGNETSMVLTGLEGNSVYVITVRGFNSIGQGPA
STANTAKTKKDPPVQPPANLMWIQEGTNVSLNWEPVKSKDNESDVIGYKVLLSQEGRVHH
QVMRTITPSAVLSLPEGGTYIIEVRAVSEGGEGATSSQVRVLTSSGVRAKSGQCSVHSLL
PWGLPWTTALLLSFPLVPSASW
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctgtgaagccagaggcaaccctgcacctgcatacagttggtttatcaatgga
acagaagtggatattgaggcagtttaccgttacagcttgatcgacggcaacttgataata
accaatgccagcgagacggcagactatgggagataccagtgtaaggcagagaacagctac
gggacggtcctgagtcgggatgcattgctacagtttacctatctggggtccttcagtggg
aggacgagaggaggcgtgtctgtaagggaaggacaaggagtggtgctcatgtgtactccg
ccccctcattcaccagagattatctacacctgggttttcaacgagttcccgtcatttgtt
gctgaggacagccggcggtttatctcacaggtaacgggcaacctgtatgtctccaaggtg
cagcctagcgacgtgggcagctacatctgtctggtgaagaacacggtgaccaacgccagg
gtcctcagcccgcccactccactcacactcagaacagatggtataatgggagaatatgag
cctaaaatcgaggtgcatttcccccagtctgtcctggctgccagaggagtcaccgtgagt
ctggagtgtttcgccctggggaatcccgtcccaaccataacgtggaggaagatgaatggt
aacatccctaagaaggctcgtctgaggaagtcccaggctgttctggagatccctaatgta
cagctggaagactcagggacctacgagtgtaaagcggagaaccccagaggaggaacagcc
tttaagggacacatccagatctacaccttcccccagtggatcagcacgataaacgacagc
cagttggacagtggagatcagctgcactgggagtgcaaggccacagggatccctagaccc
acctaccgctggctccgcaatggagagttgatcacaccacagagcagggtggagatggtg
aatggagagctcattatccagaaggtccaacaggctgactctgggatgtaccagtgtgtc
gctgagaacaaatacggagccatctactgcagcgcagaactcacgatcttagcatcgccc
ccagtcttcagccttaaacctgtccgtctgatcgccacgttggggaaggacgtgttgttg
gagtgtaaaccccgagcatctcccaagcctagagtaacatggaggagaggagacagacgc
attcatcccagcagaaggataatgttattacgaaataacactctgaggatcatcaactcc
agtcgctctgacgagggggactatgtatgtcgagctgagaatcagtttggttcggctgag
atgacggccatgctccgggtaaaagaggccatgcatgtggaattgagcccctgcaaagtg
gaggtgacggtgggggagagcgtggtgctcagctgtaaggtgtcacatgacccgtctctg
gacgtggccttccagtggctcctcaaccagcagcccctcaacttccaacaggagggtgga
cattttgaatacatccaaagacagtcctccacggtggacctgatgatcagaagcatctta
ctgcagcatgctgggaaatacagctgccgggctcagaccagcgccgacactttgtttgct
gaggctgaagtccttgtcagaggccccccaggaccccctggtgtggtgatagtagaggag
atcacggacactacagccaccctgtcgtggagtggaggggtggacaaccacagccccatc
agcagctacaatctccaggcccggagccctttttccctgggctggcagaccctcaggaca
gacccagagccagtgacaggggacatggagtcagccatggctgtggacctgaacccctgg
gtggactatgaattcagggtggtggccagcaacgctattgggacaggagaccctagtgcc
ccatccagaggggtccggactaaagaagcagtcccctcggtggccccagctaacgtcagt
ggagggaacggccgcaggcatgaactggtcacctcctgggagcctgtgtctgaggagttc
cagaatggcgagggttttggctacatcgtggcgttccgagccaatggtacgcgaggctgg
aaggagaagatggtgacatcagcagattccactacatacaagtatagagacgagaccttc
cctcccctcacccccttcgaagtgaaagtgggcgtgtacaacaacaagggagacggaccc
ttcagtggtgtggtcactgtgtactctgcagagggagagcccagggacgccccatctgag
gtgaaagcttccagcatttcctctaaggaaattaaggtcacttggagacagatcaaccct
ggtcctgggagaccacggggatacgaggtgagctacaggaaggacagtgagcaggaggag
tcagggaagaagaagaagacagcaggtaacgagacatctatggtgctgacagggttggag
gggaacagtgtgtacgtcatcacagtcagaggcttcaacagtatcggccagggccctgca
tcaaccgctaacaccgccaagaccaagaaagatcctccagtccagcctccagccaacctc
atgtggattcaggaaggaactaacgtgtctctaaactgggagccggtcaagtctaaagac
aacgagtcagatgtcataggctacaaggtgttattgagccaggaggggcgtgtccaccat
caggtaatgaggaccatcaccccctcggctgtcctctctctccctgaggggggcacatac
atcattgaggtgcgggccgtgagtgaggggggagagggagcaaccagctcccaggtcaga
gtactcacctcttcaggtgtccgagcaaagagtggccagtgttcggttcacagcctgcta
ccgtggggcctgccatggactactgctctgctcctctcctttcctctggtgccttcagct
tcctggtga
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