Oncorhynchus kisutch (coho salmon): 109879732
Help
Entry
109879732 CDS
T09179
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109879732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRCT
LRRNT
Motif
Other DBs
NCBI-GeneID:
109879732
NCBI-ProteinID:
XP_031680102
Ensembl:
ENSOKIG00005030061
LinkDB
All DBs
Position
LG5:5509773..5527036
Genome browser
AA seq
980 aa
AA seq
DB search
MLWFSLLSVVVLGCVTPTQTHTHTHTPTPTSTHTPMVDSSEEEVDEPCFEPCTCEVKEGV
LHVHCDGRGFTNASQVSQSWLRPFKLNLQRNSLRRLYSNGFLHHSNAVAINLGNNALQDI
RAGAFHGLGTLRRLYLHENKLEVFRNDTFSGLEALEYLQADYNVIKRIDSGALRYLHKLR
VLILNDNLIPALPPHLFRSVSLTHLDLRGNRLKSLAYAGTLEYVGRSLMELQLEENPWIC
GCEAVQLQTWLGHIPYTAVVGDITCEYPFHLHGKDLREIPRKELCAGEVEGEGEKEGERE
KHGGVQPPQHPPSNPKANPKPGRPRPTKPSSMVHHQNTHTSSSSTSSSAERRGRERSPRP
TKRPRASRTPPTQRSLLPNQPPPIAGYQTRPPIPIICPLGCTCNLHISDLGLTVNCKESG
FNNVSQLMPRPLNGRKLYLSGNLIQRIYKSDFWNFSSLDLLHLGNNRISFIQEGAFSSLP
TLRSLYLNGNNLQRLSPHMFLGLLNLRYLYFEYNEIGVVEAGVFSPMPSLQLLFLNANLL
RSLPVGVFQGISLSRLNLRNNHFLSLPVEGVLEHLTGLVQVDLQQNPWECRCDAAPLKRW
LEGLSAVVVVGEVVCHSPEETTGTDLRSLSLDLLCPELDTHQATVENQGEWNSSTAPDGD
FSLGYPVPGNGPLGPITKASIPLSVLVLSLLVLFVSAFFAAAALIAYALRRRDKLPFRRQ
GEVDLAGIQMECGIFTEQHHRLPVPKTPPSPSALQHSLVYDSILPVVPGPDPNLSPSTHM
CSSPVYKNEDDSVVRQQQQQFSASKEKGNVGRHFSGGGRESEGHYRLVAEREREWNMEVS
PPSISTVAGAVGPPLSDLHGNGTLCPTVIDSQGPTPKVGLVDCLFGISGMSAAVPEFRDL
PDMYTRPPPPRYPHPPQPPQPPEPKEETRASQSLVVTTMTACVGPSSSNQSENSEFPREL
RMRLSTKPDYMEVLDRSYQF
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggttctccctgctgtctgtggtggtcctgggttgtgtgaccccgacccagaca
cacactcacacacacaccccgacgcccacctccacacacacccctatggtggacagctcg
gaggaggaggtggacgaaccgtgcttcgagccgtgcacgtgtgaggtcaaagagggagtg
ttgcacgtgcactgtgatgggcggggcttcactaacgccagccaggtgtcccagtcttgg
ctccgccccttcaagctcaacctgcagaggaactccttgaggcgtctctatagcaatggc
ttcctgcaccatagcaatgccgtggcgataaacctaggcaacaacgcgctgcaggacatc
cgtgccggggcgtttcatggtctggggacactgagacgcctctacctccacgagaacaaa
ctggaggtgttccgcaacgacaccttctctggcctggaggcactggagtacctgcaggcc
gactacaatgtcatcaaacgcatcgacagtggggcgctacgctacctgcataaattacga
gtgctcatcctcaatgacaacctgatccctgctctgcctcctcatctcttcagatctgtg
tctctgacccacctggacctgcgggggaaccgtctgaagagcctggcctacgccgggacc
ctggagtacgtgggccgcagcctgatggagctccagctggaggagaacccctggatctgt
ggctgtgaggcagtccagctgcagacctggctgggacacattccctacaccgcagtggtg
ggggacatcacctgcgaataccccttccacctgcacgggaaagacctgagggagatacca
cgcaaagaactgtgtgccggagaggtggagggagagggggagaaggagggagagagggag
aagcacggaggggtacagcctcctcagcatccgccctctaacccaaaagcgaaccccaag
cctgggaggcccagaccaaccaagccgtcctccatggttcaccatcagaacacacatacc
tcatcttcgtcaacttcatcatcggcagagcggagggggagagagaggtcccctcggccc
accaagcgtccccgggcctccaggacgccccccacccagcgtagcctcctccccaaccag
ccccctcccatcgcagggtaccagactcgcccccccatccctatcatatgtcctctgggg
tgcacctgtaacctccacatctcagacctaggattgacagtcaactgtaaggagagcggc
ttcaacaacgtgtcccagctcatgccacgccccctcaacggacggaagctgtacctcagc
ggcaacctcatccagcggatctataagtcagatttctggaatttttccagtctggatcta
cttcacctgggaaacaaccggatctcctttattcaggagggagcgttctccagcctgccg
accctgaggagtctctacctgaacggcaacaacctgcagaggcttagcccacacatgttc
ctgggtctacttaacctcaggtacctgtactttgaatacaatgagatcggtgtggtggag
gcgggagtgttcagccccatgccgtctctccagctgctcttcctcaacgccaacctgctg
aggtcacttcctgtcggagtgttccagggcatctccctctctcgcctcaacctccgcaac
aaccacttcctcagcctgcctgtagagggggtgttagagcaccttactggactggtgcag
gtggacctgcagcagaacccatgggagtgcaggtgtgatgcggcccctctgaagcgctgg
ctggagggcctgagtgcggtggtggtggtgggggaggtggtctgtcactcaccagaagag
accacaggtacagaccttcgctctctttccctggacctcctctgtccagaactggacacc
caccaggccacagtggagaaccagggggagtggaacagctccacagccccagacggtgat
ttctctctgggctaccccgtgccaggcaatggccccctgggtcccatcaccaaggcttcc
atccctctgtcggtgttggtgctcagcctgctggtgctgttcgtgtcggcgttctttgcg
gcagcggcgctgatcgcctatgccctgaggaggcgggacaagctgccgttccggcgacag
ggtgaggtggatctggccgggatccagatggaatgtgggatattcaccgagcagcaccac
aggttaccggtaccaaagacccctccttctccgtctgccttgcagcatagccttgtctac
gatagcatcctccccgtcgtccctggccctgaccctaacctcagtccctcaacacacatg
tgcagtagcccagtctataagaatgaggatgattcagtggtgaggcagcaacagcagcag
ttttctgcctctaaagagaaagggaacgtgggaagacacttctcagggggggggagagag
agcgaaggacactatcgtttggtggcagagagagagagagaatggaatatggaggtgtcc
cccccctccatcagtaccgttgccggggcagtgggaccccctctttcagatctccatgga
aacgggaccctctgcccaacggtcatagacagccagggccccacccccaaggtgggattg
gttgactgcctgtttgggatctctggaatgtccgccgccgtcccagagttccgagacctg
ccggacatgtatacacgtcccccaccaccccgctatccccaccctccacaaccccctcag
ccccccgaacccaaagaggaaactagagccagccaatcactcgtggttactacaatgaca
gcgtgtgtggggccaagcagtagtaatcagagcgagaactctgagtttccgcgagagttg
agaatgagactcagtaccaagccggattacatggaagtcctggacagatcttatcagttc
taa
DBGET
integrated database retrieval system