Oncorhynchus kisutch (coho salmon): 109879797
Help
Entry
109879797 CDS
T09179
Symbol
rere
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109879797 (rere)
Transcription factors [BR:
oki03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109879797 (rere)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
GATA
ELM2
Myb_DNA-binding
CCDC47
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
109879797
NCBI-ProteinID:
XP_031659675
Ensembl:
ENSOKIG00005039105
LinkDB
All DBs
Position
LG24:40920894..41247897
Genome browser
AA seq
1575 aa
AA seq
DB search
MTADKDKPDREKDRDRDRDRERDRERDRDRDKRDKASRESESSRPRRSCTLEGGAKNYAE
SEDEDNENRGGAGAVGGINMGIGEESGKKGKKKMIKKKSRYERMENGEITSFITEDDVVY
RPGDCVYMESRRPNTPYFICSIQDFKLSKRDHLLLSVKWYYRQSEVPDSVYQHLVQDRNN
ENDSGRELVITDPVVRGRELFISDYVDTYHAAALRGKCNIAHFSDIFAAREFKARIDSFF
YILGYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSEAPGVLTQAVTENEELVWMPGVN
DCDLLMYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESCYDAGKALQRL
VKKPVPKLIEKCWSEDEVKRFIKGLRQYGKNFFKIRKELLPNKETGELITFYYYWKKTPE
AASSRAHRRHRRQPVFRRIKTRTASTPVNIPSRPPSSEFLDLSSANEDDLDSEDSEQELK
GYACRHCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEDE
DGLSGKHSMKTRRNRGSMSTLRSGRKKQTASPDGRVSPTNEDLRSSGRTSPSAASTDSTD
SKTDPMKKPSKKIKEESPMKCAKRQREKGGASDTEDTDNRTIAKKSKTQELGRSDSPSEC
EGESSDGHSVNEECSSDAKDIDQDNRSSSPSIPSPRDGESDSDSSAQQQLLLLQRRERER
DREGQSQHPPVIQSCQPGTSGGRSTTPPLPPTSSTAPSLVPQVSSPSAPPTFLPLPLPPP
MPQQAGPLSLNQSGVSIHPQRRPSPSPHSPLQGMSQAPPPGPQAPPPGPQSLPSALHGPQ
PHPSSIPHPLQVGPSHLPHPHSFPPQSQVPPSPLPLGQLQQPPHRVHTPPSQSLSQGVSS
NQLPREQLLPHAPSMSMPHIKPPPTTPIPHMPNRDPQSHKHGPPHLSAPPFPQMPSNLPP
PPALKPLSSLSTHHPPPAHPPPLQLMPQGPGQQLQPPPAQPPVLTQSQNLPLSERERGNQ
HPPPLPLSGPSQSSHPNTPQQPPFPPHPFNPVLPPSSAGCPPSSSSLPPGLQPPSSFSMP
ITAPVGSACTGPAVPPVHIKEEPLDESEEPESPPPPPRSPSPEPTIVNTPSHASQSARFY
KHLDRGYNTCARTDFYFTPLAASKLAKKREEALERVKREAEQKAREEKEREREKERERER
EREKEQERAAKASSSCHDGRMGDPQMGGSAHMRPPFDGPPTSIAAVPPYIGPDTPALRTL
SEYARPHVMSPTNRNHPFFVSLNPNDPLMAYHMPGLYNADPGMRERELREREMREREMRE
RELRERMKPGFEHKPPELEGMHPSANPMEHFARHGAISLPSMAGPHPFASFHPGLNPLER
ERLALAAGPQLRPDMSYPERLAAERLHAERMAAVANDPIARLQMFNITPHHHQHSHIHSH
LHLHQQDSLHQGGGECLVCPPGSGGHPLVDPLAGGPHLARFPYPHGAIPNSLLGQNPHEH
EMLRHPVFGTPYPRDLPPQMSAAHQLQAMHAQSAELQRLAMEQQWLHGHHHMHGGPLPGQ
EDYYSRLKKESDKQL
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggacaaagacaagccagacagagagaaggacagggacagagaccgagacagg
gagagggacagagagagggacagagaccgggacaagagggacaaagcgtccagggagagc
gagagctcacgaccacgccgcagctgcacgttggagggcggagctaagaactacgccgag
agcgaggacgaggataacgagaacaggggaggtgccggggcagtaggcgggatcaacatg
gggattggggaggagtcagggaagaagggaaagaagaagatgatcaagaagaagtcgagg
tatgaacggatggagaacggagagatcacttccttcattactgaagacgacgttgtttac
agacctggcgattgtgtatatatggagagccgcaggcccaacactccctacttcatatgt
agcattcaggattttaaactgagtaaacgagaccatctgttactcagtgttaaatggtac
taccgtcagtcagaggtccctgactcagtctaccaacacctggtgcaggatcgcaacaat
gagaacgattctggccgggagctggtcatcacagacccagtggtcaggggcagagaactc
ttcatctccgattatgtggacacataccatgctgctgcccttagggggaagtgtaacatt
gcgcatttctcagacatcttcgctgccagggagttcaaagctcgcattgactccttcttc
tacatcctgggatacaacccagagaccaggcgactaaacagcacacagggggagatcaga
gtggggcccagtcaccaagccaagcttcctgagttgcagcccttcccctccgaggccccg
ggggtcctgactcaggctgtaacagagaatgaggagctagtgtggatgccaggggtcaac
gactgtgacctgctcatgtacctcagggctgcaaggagcatggcggccttcgctgggatg
tgtgacggaggttctacggaggacggttgcctggcagcctcgcgagacgacaccacactc
aacgcactcaacacgctccacgagagctgttacgatgcaggcaaggccctacagcgcctg
gtgaagaagcccgttcccaaactcatagagaaatgctggtcagaggacgaagtgaagcgg
ttcattaaagggctcagacagtacggcaagaacttctttaagattcggaaagagctgcta
cccaacaaggaaacgggtgagttgataaccttctactactactggaagaagactcctgag
gcggcgtcgtccagggcccaccgtagacaccgtcgtcagcctgtgttccgacgcatcaag
acacgcaccgcctccacccccgtcaacatcccgtctagacccccctcctcagagttcttg
gacctgagttcagccaatgaagatgacctggacagtgaagacagtgagcaggagctgaag
ggttacgcctgccgacactgtttcaccaccacctctaaggactggcaccacgggggcaga
gagaacatcttgttgtgtacagactgtcgtatccactttaagaagtacggcgagctgccc
cccatcgagaagcccgtggatccacctccgtttatgttcaaacccgtcaaagaggatgag
gatggactcagcgggaaacatagcatgaagacccgacgtaacagaggatcgatgtcgacg
ctccgtagtggccgtaagaagcagacagccagccctgatggacgagtgtctccaaccaat
gaggacctccggtctagtggccgtacctccccctctgcagcctccacagacagcactgac
agcaagacagaccccatgaagaaacccagcaagaagatcaaggaggagtctcctatgaag
tgtgccaaacgccaacgagagaaaggaggagcctcagacaccgaggacacggacaacagg
acaatcgcaaaaaagtccaagacccaggagctgggtcggtccgactcgccgtcagaatgc
gagggagagagctccgatgggcacagcgtcaacgaggagtgtagcagtgacgctaaagac
atcgaccaggataaccgcagctcctcgccctccatccccagcccccgagacggggagagt
gactcggactcctccgcccagcagcagctgctcctactgcagaggagggagagagagaga
gatagggagggacagtcgcagcaccctccggttatccagtcctgtcagccagggacctcc
ggtggtcgctccaccaccccgccattacctcccacgtcctccacagccccctcactggtc
ccccaggtgtcctctccctccgcaccccccactttccttccactgccgctaccgcctccc
atgccccaacaggccggccccctctctctcaaccaatcaggggtgtccatccacccccag
aggcggccctctccctcgcctcattctccgctgcaggggatgtctcaggctccaccccca
ggacctcaggctccacccccaggaccccagtcgctacctagcgcgctccacggcccacag
ccccacccatcatccattccccacccacttcaggttggcccctcccacctgccccacccc
cactccttccccccccagtctcaggtcccgccctccccactgcctctcggccaattgcag
cagccgccccacagggtccacacgcctcccagccaatcgttgtcccagggtgtatcgtcc
aatcaactgccccgtgagcagctcctaccccatgccccctccatgtctatgccccacatc
aagccccctcccaccacccccatcccccacatgcccaaccgcgacccccagtctcacaaa
cacggccctccacatctatcggcgccccccttcccccagatgccctccaacctgccccct
ccgcccgccctcaaacccctctcctccctgtccacccaccaccctcccccagcccaccct
cctcccctccagctcatgcctcagggccctggccagcagctccagcccccaccagcccag
ccccctgtcctcacccagtcccagaatctccccctttcagagagagagagaggcaaccag
cacccccctcctctacctctctccggaccatcgcaatcctcccaccccaacacaccccaa
cagcccccgttccctcctcaccccttcaaccctgtcctgcccccctcctccgctggctgc
cctccctcgtcctcgtctctaccaccaggtctccagcctccctcctccttctccatgccc
atcaccgcccccgtcggctccgcctgcacaggtcctgccgtcccgcctgtacacatcaag
gaggaacctcttgacgaatcagaggagcccgagagccctccgccccctcctcggagcccc
tcccccgagcctaccatcgtcaacacgcccagccatgccagccaatcagcacggttctac
aagcacctggaccgtgggtacaacacgtgtgctagaacagacttctactttactcctctg
gctgcttctaaactggccaagaagagagaagaggcgctggagcgggtcaagagggaggcc
gagcagaaagcccgggaggagaaggagagggagagggagaaggaacgagagagggaacgg
gaaagagagaaggagcaggagagagctgcgaaagcctccagttcgtgtcatgacggtcgt
atgggtgacccccaaatgggtggctccgcccacatgcgtcctcccttcgacggcccccct
acctccatcgccgcggtgcccccctacatcgggcccgacacgcccgcccttcgcaccctc
agcgagtatgcccgcccccacgtcatgtccccgaccaataggaaccaccccttcttcgtc
tccctcaaccccaacgaccccctgatggcctatcacatgcctggcctctacaacgccgac
ccgggcatgcgggagcgcgagctgcgagagcgggagatgagggagagagagatgagggag
agggagctgagagagaggatgaagcctgggttcgaacacaaacccccggaactagaaggc
atgcacccctcggcgaaccccatggagcacttcgcccgacacggggccatctccttacca
tccatggcgggaccacaccccttcgcctccttccacccaggtctcaaccccttggagagg
gagcgtttggcgttggccgcgggaccccagctcagaccagacatgagctacccggagcgg
ctggcggcggagaggctgcacgccgagaggatggcggcggtggccaacgaccctatcgcc
aggcttcagatgttcaacatcacgcctcatcaccaccagcactcccacatccactcacac
ctgcaccttcaccagcaggactccctgcaccaaggcggtggtgaatgtcttgtgtgccct
ccaggttcgggggggcaccccctcgtagaccccctggcaggaggcccccacctcgcccgc
ttcccttacccacacggcgcaatccccaactccctcctgggacagaacccacatgaacat
gagatgctgcgacaccccgtcttcggtactccgtacccccgggaccttcctccccagatg
tccgcagcccaccagctccaggccatgcatgcccagtctgcagagctgcagcggctagct
atggaacagcagtggctgcatggacatcaccacatgcacggtggcccacttcctggccaa
gaggactattacagccgcctgaagaaggaaagcgacaagcaactgtaa
DBGET
integrated database retrieval system
