Oncorhynchus kisutch (coho salmon): 109879839
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Entry
109879839 CDS
T09179
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oki03037
]
109879839
Cilium and associated proteins [BR:
oki03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
109879839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
TPR_17
RPN7
TPR_11
TPR_14
TPR_NPHP3
TPR_9
TPR_19
TPR_6
PUB
AP4E_app_platf
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
109879839
NCBI-ProteinID:
XP_031676253
Ensembl:
ENSOKIG00005003862
LinkDB
All DBs
Position
LG3:complement(29348134..29696451)
Genome browser
AA seq
2474 aa
AA seq
DB search
MEKQATLKEKFSIFGSRTVGRAAQREAEEKGGRCGLNKAEFMERVQQSNEACQRGDFQAA
VSLYGDALRADPQNCILYSNRSAALLKLGRYQASLDDAVKACLLNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAAHHTASVVVLESALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVSKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCH
EQHLGIAKALNSKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEQPIEMRAY
AGLGHAARCMQDLERAKQYHQQQLAIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLSIAQELTDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGSYLDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGNFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVTGAIQFY
EQQLALAHQMKERRMEACAYASLGATYRLVQKYDKSLGYHTQELEVYQELGDVPGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPGIEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVLDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLGIARDTQDRPLEGDASCGLGVVYQSMGEYETALRCHQSDLEIAEETGSPARQG
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVPDGGPDLH
EGGGGGVASGSSLEQHIASAREVLGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGCSSLPRRPSSLSKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIR
GMGTISKSHSRRAGPASCGGVSMAAVVGNPRLPSSVMDRWLWGPMPSAEEEALMVSELLG
CQPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTPNPESVPGGAGTGGRGAGGG
RRGIGGRGRKGSFGSSYTIPESLHLQDDGSDAESICDSPPLQEFLLTAADILDLRLPVKL
VVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVSASKVFVHSFYTALLNGT
KASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPERARD
ALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWHALLTAVGFRLDSAGTGIP
AAVFFPTADPGDRLQQCSTTLQSILGLPPPALQALCKLITASEAGEQLINRAVKNMVGML
HQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGK
QANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPLGYPNPPFSPP
CLDNLASDAISVYSLSSVASTMSFASKSECDFLGHRQRGGATAHFSAHKHPHVPRSRSSP
HGAAAAVGGGRGDDEEYEGFSIISSEPLGSHCDSLPLPLGHGQRHLHRGGRGVVGGSSSG
TGRGYQVSVSSRGSVSTPTSPVKTSLVPSSNSPFQKVPGKVSSSDTGESDQSSTETDSTV
KSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAGVEGAAAGATARSSAFRSSETSAF
SRPSSSASVRAQSSPRPKPPSRSSSLQKISSGYNSPAASETSLKDSSHPSPTLDSHAQFK
LKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSACSSPADAPDLDRLRR
GVIDEKVVAIHNLKTFWANAAAQQQQQHLGPVRALRGAPGSLVSAKRDVLSLLNLSPRHC
SPSDAQDSLELRELGLHSLDRGSKNPSNGHNPRKMAPSPTISTSSSPGARSIRLPAGNGY
KFLSPGRFFPSSKC
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcaacgttaaaggaaaagttttcaatcttcggctcccggacagtgggc
agagctgcgcagcgggaagctgaagagaaagggggccgatgtggcctcaacaaggcagag
ttcatggagagagttcagcagagcaacgaggcctgccaacgcggtgacttccaggctgcc
gtgagtctctatggcgacgcccttcgagccgacccacagaactgcatcctctacagcaac
cgctcagcagcccttctcaaattgggacgctaccaggcttccctggacgacgctgtcaag
gcctgtctactcaaccccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcgctggccgcctttgcctcggggctggcccaagacccc
aagagcctgcagctactggtgggcatggtggaggctgccatgaagtccccactacgagag
tcactggaacccacctaccagcagctgcagaagatgaaactggacaagagtccgttcgtg
gtggtgtcagtgattggtcaggagctgctgacagcagcccaccataccgcctccgtggtg
gtactggagtccgcattaaagatcggcacctgcagcctcaagctgcgcggctccgtcttc
tcagccctcagcagtgcccactggtccctgggcaataccgagaagagcaccggttacatg
cagcaagacctggaggtctccaaaacactaggtgaccaaacaggtgaatgtcgtgcccat
ggcaacctgggctcagcattcttctccaaggggaactaccgcgaggccctgactaaccac
cgccaccagctggtcctggccatgaagctcaaggacagggaggcagcttctatggccctg
agcagcctgggtcatgtgtacacagccatcggggactaccctaatgccctggccagccac
aagcagtgtgtcctactggccaagcagtccaaggaccagctgtcggaggcacgagagctg
ggcaacatgggcgccgtctacatcgccatgggcgactttgaaaacgctgtccaatgtcac
gagcagcacctgggcatcgccaaggccctgaacagcaagagggaggaggcccgtgcctac
agcaacctgggcagtgcctatcactaccaccgtaactttgacaaggccatgtcctaccac
acccatgtgctggagctagcccaggagctagaggagcagcctatagagatgagggcgtac
gctggactggggcacgctgcacgctgcatgcaggacctggagagagccaagcagtaccac
caacagcagctggccatcgctgagggcctgaaggacagagctgcagagggaagagcctcc
tccaacctgggcattatccaccagatgaaaggagactatgaaactgcactgaaactgcac
aaaacccacctctccatcgcccaggagctcactgactatgctgctcagggccgggcctac
ggtaacatgggcaacgcctacaacgcgttgggggcctttgaccaggccgtacgctatcac
cgccaggagctacagatctccatggaggtcaatgaccgagcctcccaggcctccacccat
ggtaacctggccgtggcctaccaggctctgggggcccacgaccgcgccctgcagcactac
cagaaccacctcaatatcgcccgcgagctgcgagacgtccagagtgaggctcgcgccctc
ggcaacctggggaacttccactgctcccggggagagttcccccaagccgtgccctactac
gagcagtacctccgcttgtcccctgacctccaggacatggagagtgaggggaaagtctgc
cacaacctgggctacgcccactactgcctgggaagctacctggatgctgtcaagtactat
gagcaggacctggctctggctaaggacctgcatgacaagctgagccaggccaaggcctac
tgtaacctgggactggccttcaaggctctgggtaacttcaccaaggcagaggagtgtcag
aagtacctgctctctctagcccagtctcttaataatgcacaggcccgcttcagagccctg
ggcaacctgggggacatctttgtctgcaagaaggatgtgaccggagctatccagttctat
gagcagcagctagccctggctcaccagatgaaggagcgcaggatggaggcgtgtgcctac
gcttccctgggtgccacctacagactggtgcagaagtacgacaagtccttgggctaccac
acccaggaactggaggtgtaccaagagctaggcgatgttcccggggagtgtaaagcccac
ggccacctggcagctgtctacatggccctggggaagtatgccatggccttcaagagctac
gaggagcagctagagctgggccgcagactgaaggacccgggcatagaggcccaggtctac
ggcaacatgggcatcaccaagatgaacgtaggggtgatggaggaggctataggctacctg
gagcagcagttggccaccctgcagcagctgagtggcaacgaggccgtactggaccggggc
agggcctatggtaacttgggagactgttacgaagccttaggagactttgaggaggccatt
aaatactacgaccagtacctgtctgtggcccagagcctgaaccgcatgcaggaccaggag
aaggcttaccgaggtctgggcaatggacacagggcgatgggtaacctgcagcagtccctg
gtttgctttgagaagcgtctggtggtggcccatgagttgggggagtgtggagggaaggcc
caggcctacggggagctgggggcgctccacagccagctggggaactatgaacaggccatc
tcctgtctggagcgccagctaggcatcgcccgcgatacccaggaccgcccactagagggc
gacgccagctgtggcctgggtgtggtctaccagtccatgggggagtacgagacagccctg
cgctgccaccagagtgacttggagatcgcagaggagacgggcagtcccgcccgacagggc
cgcgcctatggcaacctgggcctcacctatgagtcactgggcaactatgagcgtgcggtg
gtgttccaggagcagcatctgagtgttgcagctcagaccaacgacctggcagccaagacc
ctggcctacggtagcctggggaggacacaccatgcactgcagaactactcacaggctgtc
atgtatctgcaggaaggcctacggctggcggagcagctggctcggcgtgaggatgaggct
aagatccgccatcgtctggggctgtctctgtgggccagtgggaacctggaggaggcccag
caccagctctaccgagcgtctgcactgtttgagaccattcgtcacgaggcccagcacagc
accgactacaaattgtctctgtttgacctgcagacgtcctcctatcaggcactccagagg
gtcctcgtcagcctaggccaccatgacgaggcgttggcggtggcagagcggggtcggaca
cgagcatttgctgacctgctggtggagaggcagacaggccagcaggactcagacccctac
accccagtcacagtggagcacatcctggacacggtgaacagccagagggccctggtgctc
tacttctccatggctgctgggtacctgtacagctggctgctggctccaggagcaggcatc
ctgaagttccacgaggtgtacttgggagagggcgtgccagatggcgggccagacctccat
gagggtgggggagggggtgtggccagcggctcatctttggagcagcacattgccagtgct
cgggaggtcctgggagtagagtcctactacagcaggggttgttccagcagtgagacagag
agtgaggcaggggacctcttggaccagcagtttgaggagctcaacaacaaactcaactct
gtgactgaccccacaggcttcctccgcatggtgtccagaaacaacctcttcaacaggagc
tgccagagtatgaccagcctgttcagtaacacaatgtccccagccaaagatggctgctcc
tctctgccccgccgaccaagcagcctcagcaaacctcctctccgtgccctctacgacctg
ctcatcgcacccatggaagggggcctgatgcattccagtggtcccgtgggcagacacaga
cagctggtgttggtgttggagggggagttgtacctcatccccttcgctctgctgaagggc
agctcctctaatgagtacctgtatgaacgcttcagcctcatcgctgtgccctccatccgg
ggcatggggaccatctccaagagtcattctcggcgggcggggccagcttcctgcgggggc
gtgtccatggcggcggtggtggggaaccctcgtctgccgtcgtctgtgatggaccgctgg
ctgtgggggcccatgccctctgccgaggaggaggccctcatggtgtctgagctgctgggc
tgccagcccctggctggatcctctgccaccaaggagagggtgatgagtgccctcacacag
gccgagtgtgcccacttcgctacccacatctcatggaagctggccgccttggtgctcaca
cccaacccagagagtgtacccggcggggcggggactggagggagaggggcagggggaggg
aggagaggcatcggaggcaggggcaggaagggctcgtttgggagcagctacaccatccca
gagagcctgcacctgcaggatgatgggagcgacgcagagagtatctgtgacagccctccc
ctgcaggagttcctactcaccgctgctgatatactggacctgaggctgcctgtcaaactg
gtggtgctggggtcataccaggagtccagcagtaaggtgacagcagacggtgtggtaggt
ctgaccagggccttcctggctgctggggcccagtgtgtcctggtgtctctgtggcctgtt
cctgtgtcagcctccaaagtgttcgtccatagcttttacaccgctctgctcaacgggacc
aaggccagcgctgccctcgcagacgccatgaagactgtccagagcagcaagcagtactcc
cacccctccaactgggcaggttacatgctgattggtaatgatgtcaagcttaacagcccc
tcgtccctgattggccaggctctagcagagatcctacagtatccagagagagcacgggat
gctctgcgagtcttactgcacctggtggagaagtctctccagaggattcagaatggccag
cgtaactccatgtacacgtcccagcagagtgtggagaacaaggtgggcggcgtcccaggc
tggcatgccctgctgaccgctgtgggcttccgcctggactcggctggcaccggcatccct
gctgctgtcttcttccccacagcagaccctggagacaggctgcagcagtgtagcaccacc
ctgcagtcaatacttggtctaccgcccccagctctccaagccctgtgtaaactcatcacc
gcctctgaggcaggcgagcagctcatcaaccgggctgttaaaaatatggtgggaatgctc
caccaggtgctggtccagctgcagacaggggagaaggagcaggacttctctctgctgccc
atccaggtgtccatcagtgtgcagctctggagactgccagggtgccatgaattcctggct
gcactagggttcgacctgtgtgaggtggggcaggaggaggtggtactgaagacggggaag
caagccaaccgccgcaccatgcactttgccctccagtccctactggcactatttgactcc
acagagctgccaaagcgtctcagcctggacagctcgtcctccctggagtccctggcctca
gcccagtctgtctccaaccccctaccgctgggctaccccaacccacccttctccccaccc
tgcctggacaatctggcctcagatgccatctccgtctacagcctgagctccgtggcctcc
accatgagctttgcgtccaagtcagagtgtgacttcctgggccatcgacagcgtggtggg
gccacagcacacttctctgcccacaaacacccacacgttccccgcagtcgctcctctcct
cacggggcggctgcagcagtaggagggggccggggagatgacgaggagtatgaaggcttc
tccatcatcagcagtgagcctctgggaagccactgtgactccctgcctctacctctgggt
catggtcagcgccacctccaccgcgggggcaggggtgttgttggggggtccagctcaggc
actgggcggggttaccaggtgtctgtgtcatcacgaggcagtgtcagcacccccacctcc
cctgtcaagaccagcctggttcctagctccaactctcccttccagaaggtgccaggcaag
gtgagcagctcagacacaggtgagtcggaccagtccagcactgagacagacagcaccgtc
aaatcccaggaagagaagactgtccctctggatccccaagagctggcccagaagatcctg
gaggagacccaaagccacctgcgggcagtggggagtctacagcgggctggggttgagggg
gctgcagctggagccacagcccggagctctgccttccgctcctcagagaccagcgccttc
agccgtcccagtagcagcgccagtgtccgcgcccagtcctccccacgacccaaacctcca
tcccgctcttcctctctgcagaagatcagctctggttacaacagccctgcagcctcggag
acttccctaaaggatagcagtcacccctcccccaccctggacagccatgcccagttcaag
ctaaaataccctagctccccctatagtgggcacatctcccgctctcccagtaacgtgtcc
cccagctctggccaccagtccccagctggcagtgccccatctccagctctctcctactcc
tccacgggctctgcatgctccagccctgccgatgccccagacctggaccgcctcagacgg
ggagtaattgatgagaaggttgtggccatccacaacctgaagacattctgggccaatgca
gcagcccagcaacaacagcaacatctgggtccagtccgtgctctccgtggcgccccagga
tccctggtctctgccaagagggatgtgctgagccttctgaacctctccccacgacactgc
tcccccagcgacgcccaagacagcctggagctgcgggagctgggcctgcactcgctggac
agaggcagcaaaaacccctccaatggacacaaccccagaaagatggccccctcgcccact
atttccactagcagcagccctggtgctcgctcaatcagactacctgctggcaatggatac
aagttcctctcccctggcaggtttttcccctcctccaaatgctga
DBGET
integrated database retrieval system
