Oncorhynchus kisutch (coho salmon): 109879866
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Entry
109879866 CDS
T09179
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109879866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109879866
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109879866
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109879866
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
109879866
NCBI-ProteinID:
XP_020327634
Ensembl:
ENSOKIG00005017346
LinkDB
All DBs
Position
LG23:20352879..20356742
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AA seq
295 aa
AA seq
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MAANMRLPTIRKQVSLSSSLSALDGKDLVVPGDVITSDTGFMRGHGTYMDEEKLTASVAG
EVERVNKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVDTNSRQDSVLLLSSVNLPGG
ELRRRSAEDELTMRVYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSL
IKRQKTHFHNLPCGASIILGNNGFVWLYPTPGHQDEEAGGYYTSLEPVSLSDREVISRLR
NCLLALGAHKVLLYDTSVLYCYESSLPHQIKDILKPEVMEEIVMMTRQKLVELEG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaatatgagattgccaactattcggaaacaagtatcgttatcatcctctctg
tctgctttggatggaaaagatctagttgttcccggtgatgtgatcacatcagatacaggg
tttatgaggggtcatgggacttacatggatgaagaaaaactaacagcctctgtggcagga
gaggtggagagagtgaacaagctcatctgtgtacggccgctcaagaccaggttcaacggg
gaggttggagatgtggtggttgggaggatcacagaggtgcagcagaagcgctggaaggtg
gacaccaactccagacaggactctgtgttgctgctgtcctctgtcaatctgcccggagga
gagctgaggagacggtcagcagaagatgagctcaccatgagagtctaccttcaggagggg
gacctcatcagtgcagaggtacagtctgttttctcagatggggcgctctctcttcacacc
cgcagtttaaagtatggaaagttggggcaaggagttcttgtgcagctatctccctctttg
atcaagagacagaaaacccacttccacaacctgccttgtggggcctccatcatcctgggc
aataatggctttgtgtggctgtaccccaccccaggacatcaggatgaggaggctggagga
tactacaccagtcttgagcctgtctctctctcagatcgggaggtgatctcacggttgagg
aactgcttgctggccttgggggcacacaaggtgcttctgtacgacaccagtgtgctctac
tgttacgagtcatcactcccacaccagatcaaggatatcttaaaaccagaggtgatggag
gagattgtgatgatgacacgtcagaaacttgtcgaactggagggttag
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integrated database retrieval system