Oncorhynchus kisutch (coho salmon): 109879886
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Entry
109879886 CDS
T09179
Name
(RefSeq) sorting nexin-13-like isoform X1
KO
K17925
sorting nexin-13
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109879886
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
109879886
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
109879886
NCBI-ProteinID:
XP_031644873
Ensembl:
ENSOKIG00005021856
LinkDB
All DBs
Position
LG14:79283779..79347066
Genome browser
AA seq
991 aa
AA seq
DB search
MDDDLVSVAYLPGAGRRAWDYISLYPCLLCDPAGALPIWREASLSVWGWGGLGVVLFLIT
FGPFAVFYLAFYIFCFVGGGFAVTLLFGKTNSERHLERCEHSYLPATQTGILKTLEEMRL
EPKPIQIDRRLTGSNYIDEPLQQVIQFALRDYIQYWYYTLSEDDSFLLEIRQTVQNALVQ
FSTRSKEVDWQPYLTTRLVDDFATHLRVFRKAQDRLEDSKQRDLSEEMVESFFEAEVEME
RNICRDVVCTSLKDEEGFLRDLCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLVNQ
LSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDRVSELEAVKDKALEELQYLRSLDTAGD
DINVIKNQINSLMFVKKVCETRIQRLQSGKEVDALKLAANLGKLCIIPLEHILVHNIALQ
FFMDYMLVAGAQAELFFWLTVEGYRVTAQQQLEVMEGWQKDGRKGGDTKGLLKAAALGVY
EQYLSDKASPRVQVDEASVLQLGEKLQKDSDPTPEIFDDIQTKVYDMMLRDERFYPSFRQ
SPLYIRMLAELDMLKEPSYRGSDDGDGESFNGSPTGSINLSLDDLSNSCHDDNIQLHAFI
SDTGVCNDHGKTYALYAITVLRRNHDGSEDSWKTYRRYSDFHDFHMRITEQVKFENLTAI
LKLPGKKTFNNMDRDFLERRKKDLNSYLQLLLNPEMMKACPTLVHYVYDFLENKQYSKGK
GDFARKMDTFVNPLRSSMRNVSNAVKGLPDSLAGGMNKAADNMGRMSEKLGQDIKQAVFK
VPPMLPKSDFDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQ
QLIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFRDSYWPNGILAESPPRRDKNIRMRT
RVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQHGPMNRRLVYVLLEGFLETMFPH
YKFPELFVKLHSRSPRTARYTQKGKSTFPKR
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgacctggtgagtgtggcctacctccctggagctggcagaagagcctgggac
tatattagtctctacccctgcctgctgtgtgaccctgctggggcactgcccatctggaga
gaggccagtctgtctgtgtggggatgggggggtctaggagtggtgctgttcctcattact
tttggacccttcgctgtcttctacctagccttctatatcttctgcttcgtaggaggtggt
tttgcggtcactctgttgtttgggaaaaccaactcagagagacatctagagaggtgtgaa
cactcctatcttccggccacacaaacgggtatactgaagacattggaggagatgagactg
gagccgaagcctatacagatagacaggagactgactggctccaactacatagacgagcct
cttcaacaggtcatccagtttgctttgagagattatatccagtactggtattacactctg
agtgaggatgattcttttctgctggaaatcagacagacggtccagaatgctctggtacag
ttctccacacggtctaaagaggtggactggcagccttatttgaccaccagactggtggat
gactttgctactcaccttcgagtcttcagaaaggcccaagacagactggaggacagtaaa
cagagggacttgtcggaggagatggtggagtcattctttgaggcggaggtggagatggag
aggaacatctgtagagacgtggtctgtacctccctgaaggatgaagaagggttcctgagg
gatctgtgtgaggtgctgctctacctgttactacctcctggagacttccacaacaagaac
atgagatacttcctcagggagattctggcgcgaggcgttctccttcccctggtcaaccag
ctgagtgatcctgattacatcaaccagtttgttatctggatgatccgggactcgagctgt
aactacgaggcttttatgaacatcttgaagctgacagacagagtgtctgaactggaggct
gttaaagacaaggccctggaggaactacagtacctacgatcactggacaccgcaggagac
gatatcaatgtaataaagaaccagatcaacagtctgatgtttgtgaagaaggtctgtgag
accaggatacagaggctacagtctgggaaggaggtggatgctctgaaactagcggcaaac
ttaggcaagctgtgcatcatacccctggagcacattctggtacacaacatcgccctgcag
ttctttatggactacatgctggtggctggggcccaggcagagctgttcttctggctgaca
gtggagggctacagagtaacagcccagcaacaactagaggtgatggagggatggcagaag
gatggaaggaagggaggagacacgaaaggactgctgaaggctgcagcactaggggtgtat
gaacagtacttatctgataaggcgtcccccagggtgcaggtagatgaggcgtctgttctc
caactgggagagaagctgcagaaggacagcgaccccacgccagagatattcgacgacatc
cagaccaaggtatatgacatgatgcttcgtgatgagaggttctacccgtcgttcagacag
agtcctctctacatcaggatgttagctgagctggacatgctcaaagaaccctcctataga
ggatcagatgacggagacggagaatcgttcaatggttctccaacaggaagcattaatctg
tctctggatgacctgtcgaactcctgccatgatgacaatatacagctacacgccttcatc
tctgatacaggggtgtgtaacgaccacggcaagacctacgccctctacgccatcactgtg
ttgcgccgtaaccacgacggcagcgaagactcctggaagacctaccgacgctactctgac
ttccacgatttccacatgaggatcacggagcaggtgaagtttgagaatttgacggcgatc
ctgaagctgccggggaagaagacgttcaacaacatggacagagacttcctggagaggagg
aaaaaggacctgaactcgtacctacagctgctgctgaatccagagatgatgaaggcctgt
cctactctggttcactacgtctacgacttcctggagaataaacagtacagcaaggggaag
ggagatttcgctcgcaagatggatacgtttgtgaacccactgcgtagctcgatgcgtaac
gtgtccaacgctgtgaagggcctgccagacagtctggctggagggatgaacaaggctgct
gacaacatgggacgcatgtcagagaaactgggacaggacataaaacaggccgtgttcaag
gtgcctccaatgctccccaagtctgactttgacccagagcactgccgagtctcggcccag
ctggacgacaacgtagatgataacatccccctgcgtgtgatgctgctgttgatggatgag
gtgtttgacctgaaggagaggaaccagtggctccgcaggaacatcaagaaccttctgcag
caactcatcagagccacatacggagacactatcaacaggaagatcgtggatcatgtggac
ttcatgacagctccagaacaggtggccgactacgtcaagaagttccgggattcgtactgg
cccaacggaatcctggccgagtctccaccacgcagggacaagaacatccgcatgaggacg
agggtcgcggccaagaccaacctattgggaatcatgccagatgagttgaagcacatcatc
ggggcggatacgactcgtaagggaatcctgcgtgtgtttgacatgttccaacacggacca
atgaatcgtcggctggtctacgtgctcctagaaggcttcctggagaccatgttccctcac
tacaagttccctgagctgtttgttaaactccactctcgctcgccgcgcacagccagatac
acacagaaaggcaagagcaccttcccgaagaggtga
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