Oncorhynchus kisutch (coho salmon): 109879913
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Entry
109879913 CDS
T09179
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109879913 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109879913 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109879913 (usp16)
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109879913 (usp16)
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109879913 (usp16)
Ubiquitin system [BR:
oki04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109879913 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
109879913
NCBI-ProteinID:
XP_031647132
Ensembl:
ENSOKIG00005019050
LinkDB
All DBs
Position
LG15:89876420..89904015
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AA seq
886 aa
AA seq
DB search
MVKRRQKGPREDEVIDLTGPSCNHIRKGVDSSFLKKTGIDSACNSCQDCRGEEPAAAVQA
PSEEMSETPTIWMCLKCGHRGCGRTSEDQHAIKHYEKPRSDPHCLVLSLDNWSVWCYICD
DDVQYSKTGHLAQLVNNIKKQALSEPRKQSPQRKHSIVKLEDSMIEEPQETKPEEKEENT
VTQPKENQKKNGKKENGLKESSSLTRGQKAVGGASSGAVGGVSSCPLSVRGLSNLGNTCF
FNSVVQTLSQTQMLRQVINKVTAEEKTSVTITPGVSSDLEPILVQLGPPGSLTVAMCQIL
NEIQETKKGVVTPRELFSQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEMKRLNSGISE
ALKKHGRDAEQSKKLVKEYEKKGAPNNFVDQVFGGEMTSTVMCQQCKTVSLVKEMFLDLS
LPVSDQAYRKKSQKKGAGIQKASSEVKYNNGDSPSPVSLTNGDSDDLPTGSKYQQKKQKK
QAKKQAKNQRRQQKLVPLDSFTPPENTAESPVPAEQGEETGNSTQGEEEEEPLVESQSSE
TERSETAPSEQDQEKLQGAGHTEKEEEDCEPVAVSNNHSTVTSEEQSHQSPEGVGKRDGH
EAEHRGEEEEENDDGDAAQPSGDEQDTKLSDKLGELSLNEAFLASEDSDLEPGCRDGDTS
AEMETETKLEGKEYTVSHQDPKLAFHTLATRAAPGNQECSVESCLYQFTEVENLTQNNSL
LCVTCTKRQTKNKAAEGSKKNVYTDALKQMLISSPPPVLTLHLKRFQQIGYSVCKVNSHV
NFPHILDVAPFCSVICKGVSEGGSQVLYSLYGIVEHSGTMRSGHYTAYVKARPFYPSTTH
NGVGTHGEPAPVKGAWFHVSDSSVQPVTESKVQSSQAYLLFYERIS
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaggaggcagaaaggtcctagagaggacgaagtgatagacctgactggtccg
tcgtgcaaccatatccgtaaaggtgtagactccagcttcctgaagaagactgggatagac
tctgcctgtaacagctgccaagactgtaggggtgaagagccggctgctgctgtacaggct
ccatcagaggagatgagcgaaacaccaacgatatggatgtgcttaaaatgtggacacaga
gggtgtgggcgtacctctgaggatcagcatgctatcaagcactacgagaagcctcggtca
gaccctcactgtctggtgctcagcctggacaactggagcgtttggtgttacatctgtgat
gatgatgtccagtactctaaaacaggccacctggctcagttggtgaacaacattaagaaa
caggccttgtctgagccccggaaacaaagtccacagagaaagcattcaatagtgaagctg
gaggacagcatgatagaagagccacaggaaaccaagccagaagagaaggaagagaacaca
gtgacacaaccgaaagaaaaccagaagaagaacggcaagaaagaaaatggtttgaaagag
agcagcagtttgactagaggacagaaggctgtgggaggagccagcagcggtgcagtggga
ggagtcagcagctgtccgttgtcagttagaggactcagtaaccttggaaacacctgtttc
ttcaactctgttgttcagaccctctctcagacacagatgttgagacaggtcatcaacaag
gtgacggctgaagagaagaccagtgtcaccatcacacctggagtctcctcagacctggaa
cccatcctggtgcagctaggtcctccggggtctctgaccgtggcgatgtgtcagatcctg
aatgagatccaggagactaagaaaggggtggtcaccccgagagaacttttcagtcaggtc
tgcaaaaaagcggcacggtttaaaggtttccagcagcaggatagccaggagcttctacgc
tacttgctggatgggatgagagccgaggagatgaaaagactgaactctggaatatcggaa
gcactgaaaaaacacggaagagatgctgaacaatcgaagaagttagtcaaggagtatgag
aagaagggagctcctaataacttcgtagaccaggtgtttggtggggagatgaccagcacg
gtcatgtgtcagcaatgcaagacggtttctttggtcaaggagatgtttctggatctgtcc
cttcctgtctcagaccaggcctacaggaagaagagtcagaagaaaggagcggggatccag
aaggctagttctgaggtgaaatataacaacggagacagccccagccctgtctccttgacc
aacggtgactccgacgaccttcctactggcagcaagtaccagcagaagaaacagaagaaa
caggccaagaaacaggccaagaaccagagacgtcagcagaagctagtccccctggacagc
ttcacacctccagagaacaccgcagagagcccagtaccagcagagcagggagaggagaca
ggaaatagtacccagggagaggaggaggaggagcctctggttgagagccaatcatcagag
accgagaggtccgagaccgctccctcagagcaggaccaagagaaacttcagggggcaggg
cacacggagaaagaggaggaggattgtgaaccagtggctgtgtccaacaaccactccact
gtgacgtcagaagagcagagtcaccagtcccctgagggggttggaaaaagagacggacac
gaggctgaacatagaggagaggaggaggaggagaatgatgatggtgatgcagcccaaccg
tctggagatgagcaagacaccaaactttcagacaagctgggtgaactatctctgaacgaa
gccttcctagcctctgaggactcggacctggagccggggtgcagagatggagacacgtct
gctgaaatggaaacggagacaaagctggaggggaaggagtacacagtctctcaccaggat
cctaaactggcctttcacacgctggccaccagggcggcgccagggaaccaggagtgctct
gtggagtcctgtctctaccagttcacagaggtagagaacctcactcagaacaactctctt
ctctgtgtcacctgcaccaagagacagaccaaaaacaaggctgcagaaggctccaagaag
aatgtgtacacagatgctctgaagcaaatgctgatctcgtctccccctccagtgcttact
cttcacttgaagagattccagcagattggatacagtgtgtgtaaggtgaacagccacgtc
aacttccctcacattctagacgtagcaccattctgctctgtcatatgcaagggtgtgtcg
gagggaggctctcaggtgctttacagtctgtatggtatagtagaacacagtgggactatg
agaagtggccattatacagcctacgtcaaagccagacctttctacccctccacgacacac
aacggagtgggcacacatggcgagccagcgccggtgaaaggggcgtggttccacgtgagt
gacagtagtgtgcagccagtcacggagagcaaagtgcagagctcccaagcctacctccta
ttctacgagaggatctcctag
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integrated database retrieval system
