Oncorhynchus kisutch (coho salmon): 109879984
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Entry
109879984 CDS
T09179
Name
(RefSeq) optineurin isoform X2
KO
K19946
optineurin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109879984
04137 Mitophagy - animal
109879984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109879984
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109879984
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
109879984
Autophagy
Mitophagy
PINK1-Parkin associated proteins
109879984
Xenophagy
Cargo receptors
109879984
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
GBR2_CC
WipA_N
TMF_DNA_bd
PM1201
DUF4248
EDR4-like_1st
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
109879984
NCBI-ProteinID:
XP_020327784
Ensembl:
ENSOKIG00005006057
LinkDB
All DBs
Position
LG9:8887957..8896237
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AA seq
564 aa
AA seq
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MASSSPMVNGDVSRGPSSHPGHSPTTGTLEETLQQMNRLIQENRDLKEALKQTNVSMKER
FEGLSVWREKQREEKEFLEGRLDEARSRMEALSSHNQELSMKVEELEGGGEGKGQAETAD
QNSELEALRAQLVRLQAEKNDLVAMNSELQLKTGQGSEDDSFIEIRFAKEDTGKELYHNE
RDPRYDMSVSRQESEELTVSQLLQSLRKETQRVERLQVELQATRSRITELEEKETNTESS
TQTPLLPEVVSPALANTACGPEPEPAEAPQQNSGKEKAVSEVENLKAQMMTLFNELQQAQ
SKLGEAEGMKKNLQDRCRDVEQEVVTLTAQLVEKQEVQSENDRLKLQVDSMKAQSQLEQR
KAGEERTNLTQLKDAYTKLFEDYNELKQASKNQEPLVTKEVGDLQTRLDAAEKALAAKQQ
QIDVMKQEMYQKEKELETISVFQAQAEVYSSDFYAERAAREKIHEEKERLSAQLDFVKKQ
NTQLQVEMDSLGRQSLSDMQRRHMPRGGNPHGGAAPHCSMEGARGGDARDWQQQGNIPEH
VCPKCNEILPDLDSLQIHIMDCII
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagctcccccatggtgaacggggacgtctcccggggtccgagctcccacccc
ggccacagccccaccacaggcaccctggaggaaacgctgcagcagatgaaccgcctcatc
caggagaaccgagacctgaaggaggcgctgaagcaaaccaatgtgtcgatgaaggagcgc
ttcgagggtctgtctgtgtggagggagaagcagagggaggagaaggagttcctggagggg
aggctggatgaggcgcgcagccgtatggaggccctctcctcacacaaccaggagctcagc
atgaaggtggaggagctggagggaggaggagaggggaagggacaggccgagacagccgat
cagaattcagaactggaggcgctgcgtgcccaactggtgcgtctgcaggctgagaagaat
gacctggtggccatgaactctgaactccagctcaagacaggtcaggggtcagaggatgac
tccttcatagagatcaggtttgctaaagaggatactggaaaggagctgtatcataatgaa
agggaccccaggtatgacatgagtgtatccaggcaggagtctgaggagctgactgtcagc
cagctgctccagtccctgaggaaggagacccagagggtggagaggctacaagtcgagctc
caggctaccagatccagaatcacagagctggaggagaaagaaactaacacggagagctcc
acacagaccccactactgccagaggtggtttccccagcactagccaacacagcatgtggt
cctgagccagaaccagcggaggcgccccaacagaactctgggaaggagaaggctgtgtca
gaggtggagaatctgaaggctcagatgatgaccctgtttaatgagctacagcaggctcag
agcaaactgggtgaggctgagggcatgaagaagaacctgcaggacagatgtagggatgtg
gagcaggaggtggtgactctgacagcccagctggtagagaagcaggaggtacagagtgag
aatgacagactgaagctgcaggtggacagcatgaaggcccagagccagctagagcagagg
aaggctggagaggagaggactaacctgacccagctgaaggatgcctacaccaagctattc
gaggactacaacgagttgaagcaagcgagcaagaaccaagagccactggtcactaaggag
gtgggagacctgcagaccagactggacgcagcagagaaggccctggctgctaagcaacag
cagatagatgtcatgaagcaggagatgtatcagaaggagaaggagctggaaacgatctct
gtgtttcaggctcaggcggaggtgtactcgtctgacttttacgcggagcgagcagctcgg
gagaagattcacgaggagaaagaacgtctgtctgctcagctggactttgtcaagaaacag
aacactcagctacaggttgagatggactcactgggcaggcaatctctgagcgatatgcag
agaagacacatgccacgtgggggcaatccacatggaggtgctgctccacactgctccatg
gaaggagccagaggtggtgatgccagggactggcagcagcaggggaatataccggagcac
gtctgccccaagtgtaacgagatcctaccagacctggatagcctgcagattcacatcatg
gactgcatcatctga
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