KEGG   Oncorhynchus kisutch (coho salmon): 109879984
Entry
109879984         CDS       T09179                                 
Name
(RefSeq) optineurin isoform X2
  KO
K19946  optineurin
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04137  Mitophagy - animal
oki04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:oki00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109879984
   04137 Mitophagy - animal
    109879984
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109879984
Membrane trafficking [BR:oki04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    109879984
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    109879984
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    109879984
  Xenophagy
   Cargo receptors
    109879984
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 GBR2_CC WipA_N TMF_DNA_bd PM1201 DUF4248 EDR4-like_1st zf-C2H2
Other DBs
NCBI-GeneID: 109879984
NCBI-ProteinID: XP_020327784
Ensembl: ENSOKIG00005006057
LinkDB
Position
LG9:8887957..8896237
AA seq 564 aa
MASSSPMVNGDVSRGPSSHPGHSPTTGTLEETLQQMNRLIQENRDLKEALKQTNVSMKER
FEGLSVWREKQREEKEFLEGRLDEARSRMEALSSHNQELSMKVEELEGGGEGKGQAETAD
QNSELEALRAQLVRLQAEKNDLVAMNSELQLKTGQGSEDDSFIEIRFAKEDTGKELYHNE
RDPRYDMSVSRQESEELTVSQLLQSLRKETQRVERLQVELQATRSRITELEEKETNTESS
TQTPLLPEVVSPALANTACGPEPEPAEAPQQNSGKEKAVSEVENLKAQMMTLFNELQQAQ
SKLGEAEGMKKNLQDRCRDVEQEVVTLTAQLVEKQEVQSENDRLKLQVDSMKAQSQLEQR
KAGEERTNLTQLKDAYTKLFEDYNELKQASKNQEPLVTKEVGDLQTRLDAAEKALAAKQQ
QIDVMKQEMYQKEKELETISVFQAQAEVYSSDFYAERAAREKIHEEKERLSAQLDFVKKQ
NTQLQVEMDSLGRQSLSDMQRRHMPRGGNPHGGAAPHCSMEGARGGDARDWQQQGNIPEH
VCPKCNEILPDLDSLQIHIMDCII
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggcgtccagctcccccatggtgaacggggacgtctcccggggtccgagctcccacccc
ggccacagccccaccacaggcaccctggaggaaacgctgcagcagatgaaccgcctcatc
caggagaaccgagacctgaaggaggcgctgaagcaaaccaatgtgtcgatgaaggagcgc
ttcgagggtctgtctgtgtggagggagaagcagagggaggagaaggagttcctggagggg
aggctggatgaggcgcgcagccgtatggaggccctctcctcacacaaccaggagctcagc
atgaaggtggaggagctggagggaggaggagaggggaagggacaggccgagacagccgat
cagaattcagaactggaggcgctgcgtgcccaactggtgcgtctgcaggctgagaagaat
gacctggtggccatgaactctgaactccagctcaagacaggtcaggggtcagaggatgac
tccttcatagagatcaggtttgctaaagaggatactggaaaggagctgtatcataatgaa
agggaccccaggtatgacatgagtgtatccaggcaggagtctgaggagctgactgtcagc
cagctgctccagtccctgaggaaggagacccagagggtggagaggctacaagtcgagctc
caggctaccagatccagaatcacagagctggaggagaaagaaactaacacggagagctcc
acacagaccccactactgccagaggtggtttccccagcactagccaacacagcatgtggt
cctgagccagaaccagcggaggcgccccaacagaactctgggaaggagaaggctgtgtca
gaggtggagaatctgaaggctcagatgatgaccctgtttaatgagctacagcaggctcag
agcaaactgggtgaggctgagggcatgaagaagaacctgcaggacagatgtagggatgtg
gagcaggaggtggtgactctgacagcccagctggtagagaagcaggaggtacagagtgag
aatgacagactgaagctgcaggtggacagcatgaaggcccagagccagctagagcagagg
aaggctggagaggagaggactaacctgacccagctgaaggatgcctacaccaagctattc
gaggactacaacgagttgaagcaagcgagcaagaaccaagagccactggtcactaaggag
gtgggagacctgcagaccagactggacgcagcagagaaggccctggctgctaagcaacag
cagatagatgtcatgaagcaggagatgtatcagaaggagaaggagctggaaacgatctct
gtgtttcaggctcaggcggaggtgtactcgtctgacttttacgcggagcgagcagctcgg
gagaagattcacgaggagaaagaacgtctgtctgctcagctggactttgtcaagaaacag
aacactcagctacaggttgagatggactcactgggcaggcaatctctgagcgatatgcag
agaagacacatgccacgtgggggcaatccacatggaggtgctgctccacactgctccatg
gaaggagccagaggtggtgatgccagggactggcagcagcaggggaatataccggagcac
gtctgccccaagtgtaacgagatcctaccagacctggatagcctgcagattcacatcatg
gactgcatcatctga

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