KEGG   Oncorhynchus kisutch (coho salmon): 109880030
Entry
109880030         CDS       T09179                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03250  Viral life cycle - HIV-1
oki04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109880030
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    109880030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oki03400]
    109880030
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     109880030
SSDB
Motif
Pfam: SAM_1 SAM_2 HD SCD HD_assoc_2
Other DBs
NCBI-GeneID: 109880030
NCBI-ProteinID: XP_020327847
Ensembl: ENSOKIG00005026821
LinkDB
Position
LG24:complement(32425188..32468060)
AA seq 637 aa
MDIRKRPREDLPNTSSEPPALQDFGQWGVEDVCRYLCQEGHGEWENKFREQKMTGVGLRY
LTETLLDKMGIVPLGTRLHILHSLRKLWQMAAENTKVFNDPIHGHVEMHPLLVRFMDTPQ
FQRLRHIKQLGGAYFVFPGASHNRFEHSIGVGYLAGRLVQELSERQPELLISSRDILCVQ
IAGLCHDLGESQSLPPSLPLFQSYSVECDLFPGHGPFSHMFDSMFIPKMHPKSKWKHENA
SLAMFDHLVSVNALEPVMKDHGLVLPDDLVFIKEQIAGPQNTVPLRQGWPYEGRPEEKSF
LYEIVANKMSGIDVDKWDYFARDCYHLGIPNNFDYHRFLKFARVCEVDGKKQICTREKEV
GNLYDMFHTRNYLHRKAYQHKVGHIIETMITEAFIKAEPHIQIQGSEGKMFTISTAIYDM
EAYTKLTDHVFEQILYSSSSELAEARKILHNITCRNLYKNMGQTQAKKRVEVSQEQLQKW
ASELATCRPESDLQGVTLEPGDFVVNIINMDWGMKEKNPINNMRFYCKNTPTKTTRISRD
QVSQMLPDQFAEQLIRVYFKKRDEKTVEAAKINYVKWCMDNNFSKPQDGDSIAPELTPLK
RSWFHNDDENDDEEDSQGGRSRAAVNIGQQKAKARLF
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggatattcgaaagcgtcccagagaagatttgccgaatactagtagtgaacccccggcg
ttgcaggatttcgggcagtggggtgtcgaggacgtttgtagatacctgtgtcaagaaggt
catggggaatgggagaataaattcagagagcaaaagatgacaggagtgggattacgatac
ctcacagagacacttctggataaaatgggtatagtgcctctaggcacccggttgcacatc
ctgcacagtctgaggaagctgtggcagatggcagcagagaacaccaaggtgtttaatgac
cccatccatggccatgtagagatgcatcctctgctggtccgtttcatggacacccctcag
ttccagaggctccgccacatcaagcagctgggaggagcatatttcgtcttccctggggcc
tcccacaaccgcttcgaacactccataggggtgggctacctagcaggtcggctggtccag
gagttgagtgagagacaaccagagctcctcatctccagtagagacatcctgtgtgtccag
attgctgggctctgtcacgacctgggtgagtctcaatctctccctccttccctccctctt
ttccaatcttattctgttgaatgtgatctctttccaggtcatggtcctttctcccatatg
tttgatagcatgttcatccccaaaatgcatccaaagtccaagtggaagcatgagaatgcg
tcacttgcgatgtttgaccatctggtgtctgtgaatgccttggagccagtgatgaaggat
catggcctggtcctacctgatgacctggtcttcatcaaggaacagattgctggaccacag
aacactgtccctctcagacaggggtggccttatgagggccgtccagaggagaagtctttc
ctctatgagattgtggccaacaaaatgagcggcatcgatgtggacaagtgggactacttc
gccagggactgctaccacctgggcatcccgaataactttgactaccatcgcttcctcaag
tttgctcgtgtgtgtgaggtagatgggaagaagcagatctgcaccagagaaaaggaagtg
ggtaatctgtacgacatgttccacacacgcaactacctccacagaaaagcctaccagcac
aaagtgggacacataatagagacaatgatcacagaggccttcatcaaggcagaaccccac
atccagattcaaggttcagagggaaaaatgttcaccatctccacagcaatatatgacatg
gaggcctacactaaactcactgaccatgtgtttgagcagatcctgtactcgtcatcctct
gagctggcagaggccagaaagatcctccacaacatcacctgcagaaacctctacaagaat
atgggacagacccaagccaagaaacgtgtggaggtctcacaggaacagctccagaaatgg
gcaagtgaattggcgacgtgcaggcctgagagcgacctccagggcgtcactctagagcca
ggggactttgtagtcaatatcatcaacatggactggggtatgaaggagaagaaccccatc
aacaacatgcgtttctactgtaagaataccccaaccaaaaccacccggatcagcagggac
caggtgtctcagatgctgccagatcagtttgctgagcagctgatcagggtctactttaag
aagagagatgagaagaccgtggaggcagctaagattaactatgtcaagtggtgcatggac
aacaacttctccaagcctcaggacggagattcgattgcaccggagctcacccctctgaag
cgaagctggttccacaatgatgatgagaacgatgatgaagaggatagccagggaggaaga
agcagggctgcagtcaacattggacaacagaaggcaaaagccagactcttttag

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