Oncorhynchus kisutch (coho salmon): 109880081
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Entry
109880081 CDS
T09179
Name
(RefSeq) far upstream element-binding protein 3-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109880081
03041 Spliceosome [BR:
oki03041
]
109880081
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109880081
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109880081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
109880081
NCBI-ProteinID:
XP_020327897
Ensembl:
ENSOKIG00005003356
LinkDB
All DBs
Position
LG3:48135495..48216432
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AA seq
551 aa
AA seq
DB search
MMMAELVQGQASVAQSGMKADGFAHALHRARQMAGKMRNEQISHLNSSPPIVDPSMYGYV
DQKRSVEDGVGNQLGAMVHQRAVLTEDFKVPDRMVGFIIGRGGEQITRIQLESGCKIQIA
SESGGMMDRACSLNGTPESIEQAKRMLGQIVDRCRNSPGFHSEAEDNSSVHEMLIPASKV
GLVIGRGGDTIKQLQERIGVKMMMIQDGPMPTGMDKPLRITGDPYKVHQARELVIEIIRD
KYQGDLHSGRNDFASRLGGSTLDVAVPRFAVGIVIGRSGEMIKKIQGDSGVRIQFKPDDG
ISPERIAQVMGQPDRCQHAVQLINELTQTAQQERDGFGSSGGPRGRGRGRGDWVMGSPGG
LQEVTYTILADKCGLVIGKGGDTIKSINQQSGAHVELQRNPPPNTDPNVRVFSIRGTPQQ
MEVACQLIDDKIGGSGIVSNGSFGLSPYTQSPATHQNCGSGAQTLMTGGWGTAYQTWQPQ
GQQDHSHNGSQAGQMDYSTAWEQYYKKLGQTSQQQSSLPEYSAAMAEYYRQQGAYLWPGA
QATQGPGLQEH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcggagttggtgcagggacaggcctccgttgctcagtccggaatgaaagct
gacggcttcgcccacgctttacatcgggcccgacagatggcaggaaaaatgaggaatgag
cagatttctcacctaaacagttccccacctattgtagacccctccatgtatggctatgtg
gaccagaagcgatcggtggaagacggagtaggtaaccagctgggagccatggtacatcaa
agggctgttttgacagaagacttcaaagtgcctgatagaatggttggattcatcataggc
agaggaggtgaacaaattacgagaatccagctggagtccgggtgcaagattcaaattgcc
tctgagagtggcggtatgatggacagagcctgctccctcaatggaaccccagagagcatt
gagcaggccaaaagaatgcttgggcagattgtggaccgctgtcgaaacagccctgggttc
cacagcgaggctgaggacaacagctcagtccacgagatgctcatcccagccagcaaagtg
ggcctagtcatcgggaggggaggggacaccatcaagcaactgcaggagagaataggagtg
aagatgatgatgatccaggacggccccatgcccaccgggatggacaaacccctgagaatc
actggggatccctacaaggtccatcaagcgcgggaattggtgatagagatcatccgcgac
aaataccagggcgacttgcacagtggccgaaacgactttgcgtcaagattgggtggaagt
actttggatgtggctgtacccaggtttgcagtggggattgtcatcggcaggagtggtgag
atgatcaagaagatccagggagattccggagtgaggatccaattcaaaccagatgatggc
atcagcccagagcgcatcgcccaagtgatgggacaaccagacaggtgtcagcatgctgtc
caactcatcaacgagctcacccaaacagcacagcaggaacgtgatggctttggaagctct
ggaggaccaagaggaaggggacgaggccgcggggactgggtcatgggctcaccaggggga
ctgcaggaggtcacctacacgatacttgcagacaagtgtggtctggtgatcggcaaaggt
ggagataccatcaagagcatcaaccagcagtctggagcccacgtggagctgcagaggaac
ccccctcccaacaccgaccccaatgttcgcgtcttctccatcagaggcaccccgcaacag
atggaggtagcatgccagctcattgacgacaagatcggaggctcaggaatagtgagcaat
ggtagttttgggttgagcccttacactcaaagccctgcaactcatcaaaattgtggcagt
ggagcccagactttaatgacagggggatgggggacggcttatcaaacatggcagcctcaa
ggccagcaagaccacagtcacaatggatcccaggcaggccagatggactactctacagct
tgggagcagtattataaaaagctaggtcagacatctcagcagcagagctcactcccagaa
tacagtgcagctatggcagaatattacaggcagcagggagcgtacctctggccgggtgca
caggcaacccagggcccaggtcttcaggagcattag
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