Oncorhynchus kisutch (coho salmon): 109880105
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Entry
109880105 CDS
T09179
Name
(RefSeq) tubulin alpha chain, testis-specific isoform X1
KO
K07374
tubulin alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04145
Phagosome
oki04210
Apoptosis
oki04530
Tight junction
oki04540
Gap junction
oki04814
Motor proteins
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109880105
09143 Cell growth and death
04210 Apoptosis
109880105
09144 Cellular community - eukaryotes
04530 Tight junction
109880105
04540 Gap junction
109880105
09142 Cell motility
04814 Motor proteins
109880105
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109880105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109880105
03036 Chromosome and associated proteins [BR:
oki03036
]
109880105
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109880105
04147 Exosome [BR:
oki04147
]
109880105
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109880105
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
109880105
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
109880105
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109880105
Exosomal proteins of other body fluids (saliva and urine)
109880105
Exosomal proteins of colorectal cancer cells
109880105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
109880105
NCBI-ProteinID:
XP_020327937
Ensembl:
ENSOKIG00005045533
LinkDB
All DBs
Position
LG29:9807284..9824511
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSNKAIGGGDDSCNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNFARGHYTIGKEIVDLVLD
RVRKLSDQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPSPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICSRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEMLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEGEAEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctatccacgttggtcaggccggtgttcagatcgggaatgcctgc
tgggaactgtactgcttggaacatgggatccagcccgatgggcagatgcctagtaacaaa
gccatcggcggaggggatgactcatgcaacaccttcttcagcgagaccggagcgggaaaa
catgtcccccgtgctgtgtttgtggatctcgaaccaactgttgttgatgaggttcgcacc
gggacttaccgtcagttgttccacccggagcagctcatcaccggtaaagaggatgccgcc
aacaacttcgcccgaggccactacacaattggcaaggagatcgtcgacctggtgctggac
cgagttcgcaagctgtcggaccagtgcactgggcttcagggcttcctgatcttccacagc
tttggtggtggaaccggctccggctttgcttctctgctcatggagagactgtcagtggac
tatggcaaaaaatccaaactggaatttgcaatttacccttcacctcaggtgtccacagca
gtggtggagccctacaactctatcctgaccacccacaccaccctggaacactcagactgt
gccttcatggtcgacaacgaggccatttatgacatttgcagtcggaacctggacattgag
cgccccacttatactaacctcaacaggctcataggccagatcgtctcctccatcacagct
tctctgcgttttgatggagccctcaatgtggacctgactgagttccagaccaacctggtg
ccatacccccgtatccacttccccctggtcacctacgcccccatcatctctgctgagaag
gcctaccacgagatgctttctgtggcagagatcaccaatgcttgcttcgagccagccaac
cagatggtgaagtgtgaccctcgccatggcaagtacatggcctgctgcatgctgtatcgt
ggagatgtggtgcccaaggatgtgaatgctgccatcgccaccatcaagaccaaacgcact
atccagtttgttgactggtgccccaccggcttcaaggtaggcatcaactaccagccaccc
acggtggtgccaggtggagatcttgccaaggtccagagagccgtttgcatgttgagcaac
accacagccatcgctgaggcctgggctcggctcgaccacaagtttgatctgatgtacgcc
aagcgtgcctttgtgcactggtatgtgggagagggtatggaggagggggagttctctgag
gccagagaagatctggctgccctggagaaggactacgaggaagtgggagtggattcggtg
gagggagaggctgaggaaggagaggagtactaa
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