Oncorhynchus kisutch (coho salmon): 109880182
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Entry
109880182 CDS
T09179
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oki03000
]
109880182
Transcription factors [BR:
oki03000
]
Eukaryotic type
Other basic domains
RF-X
109880182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
109880182
NCBI-ProteinID:
XP_031657325
Ensembl:
ENSOKIG00005015020
LinkDB
All DBs
Position
LG22:54286701..54311848
Genome browser
AA seq
2007 aa
AA seq
DB search
MADEDEQQQHGQLKLNSVLGSFPTLVPELQGPEANALQYKIKNSICKSVQSKVDNILQDV
EKFTDIEKLYLYLKLPSGPSNGNDKSIARTENQRASTPGLCDQSGMSSSRTQQMYAFNWI
RNHLEEHPETSLPKQEVYDEYKSYCDSLAYHPLSAADFGKIMKNVFPNMKARRLGMRGKS
KYCYSGLRKKAFVHMPSLPNLDLQKSGDGCESMEPSSGLSPSAEDEMRSAACGLVCEWAQ
KVLSRQFDAVEDLSRFLLNSHYIGTKSMAALTIMTGAPTGLKTPTPTSAFVPTSEASSFQ
PQVKTLASPSVDAKQQLQRKIQKKQQEQKLHSPLPGEAQGQNQARRTEASTPGPAIPCGS
PALLSPQPTIGIVVSTVPSPITVQRSRQLMTSSSPVGSPEGKVMPTVNFQVVTHTQSLTH
RQSPKTPQNISASPVGDRLARHRYPQILPKPSATGAITLRSPPTLLITNSPMKTHHVIQP
QLSSHVNVVKMTAISLTPSNTISTSSNSMVLRPASASAGVGTTTTFTTIAALEEVQQQGQ
SQGGPTATPQCPAVRPGAPVSTVAPEAIITDNNPGVNSGKLSTIQKFPGGSNRPERATKY
RASSEPSLLVICSPGPERVAARSKSYPSSSSPPTSATNAATIRVETKQDSNNNSSTANCP
FYLTVVPSANQNTPSVSRKSSSSNGLSAVSLLTARDSSSCASRSMSPRKRTGPGLDSSHV
IPVKRVFISQQPLGVTFDPKPVVTAAVKRVPARQSTPARPESAPCRVTVKQHLVPTQILA
PSDSPVANAEISSFSSQTVSVKPQSSSLLLVKQEDQSSLTPRLSTVSSHTSSTEASGTTT
TAVSEQQQQQQQQQQQQQKQQQQALLQQITAGTVGAQQHAEVSAMAVGAQQHSVSGMAVG
AQQHSVSGMAVGAQQHSVSGMALGAQQHSEVSAMAVGAQQHSEVSAMAVGAQQHSKVSAM
AVGAQQHSEVSAMAVGAQQHSVSGMAVGAQQHSVSGMAVGAQQHSVSGMAVGAQQHSVSG
MAVGAQQHSVSGMAVGAQQHSVSVMGNMTSTMLEESAAEYVEELQKQAFTQTIAADHTKQ
QALGSTDQHQLSNIMSQTSDSSDQLSGIHQEMVDFASSASQHGSTMDYFSFNDDDMTQDS
IVEELVQMEEQMKLKGLQPLFSSCVDNISLQGQPGGPQGPILNIHHQEDSSSFYQSAHSS
ITPTLTPTPTPTEMTLGGHELTRESPCCHHSMAPITPVEGPLGGRHTPISALSNCSSGIP
PSPVECRNPFAFTPINSSMAGGYHDASMVSVSSSPIKPMQRPMATHPDKAKLEWINNRYN
SSGTEATGGVGAGPGSGLSISNHSLGGLLPSYQDLVDDHFRKPHAFAVPGHSGQSFQAQS
RQQDGSHFGHLTPISPVQQQLTSVSTTPTNTASKQDEGFAVPAPLDSKGGALSSGGGAFR
CRSVSPAVSQMTFSGTVTTPDAGTTTRLVVSQFSSPMTSQEILIILSNSQSVGGNLHSMA
QRSQSVPLNIMMQSVVEMQGIQEQNQSNATKITNVLLSKMDSDVNDTVRGLGINNLPSNY
TARMNLTQMLETHSQSHTAPGGFTTGGDGGGGGNVHQSQLQTVSSSPASFELQQHGGYLT
STGGGDGEMSFNQAQSGPGGEDVDLELQQIQELQEASGQLHAQLLQTQARLLLSPQLLRP
QLHTPQAQLQSPHPQLHIPQAQLQSPHTQLQSPHTQLQSPHTQLQSPHTQLHIPQLQSPH
TQLQSPQLQSPHTQLQSPHTQLQSPHTQLQSPQLQIPHPQLQSPQLQSPHTQLQSPQFQS
PHTQLQSPQLQSPHTQLQSPHPQLQSPQLHIPQAQLQRPQLQSPHTQLQSPQLQIPQAGF
QLLQSITTQQQQQQQDEEDKAQQQLDFNNTVKDLLGDDGLNVHAEGLNPSSQLVGQVASE
LNAAVASDFTNDIRLTSDLSSSITDLNTLDADLLFDPSNQQQEQYEDATLEELKNDPLFQ
QICSDTVNSSFDWLECKDQPTTVEMLG
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgaagatgaacaacaacaacatggtcagctgaagctcaactcggtattgggc
tcttttccaacactagtaccagaactccagggccctgaggccaatgcgttgcagtacaaa
attaagaattcaatttgcaagtctgtccagtcaaaagtggacaacatattgcaagatgtt
gagaagtttacagacatcgaaaaactctacctctacttgaagttgccttctggtcccagc
aatggcaatgataaaagcatcgctaggactgagaaccagagagcctccactccgggacta
tgtgaccagagtggcatgtcgtccagccgaacacagcagatgtacgctttcaactggatc
cgcaatcacctagaggagcaccctgagacatcactgccaaagcaagaggtgtacgacgag
tacaagagctactgtgacagtcttgcctaccacccactgagtgctgcagactttggaaag
atcatgaagaacgtctttcccaacatgaaggctcgccgcctgggcatgagaggcaaatct
aaatactgttatagtggactgaggaagaaagcttttgttcacatgccttctctgcccaac
ctggacttacaaaaatcaggcgacgggtgtgagtcgatggagccgtcgtcgggcctgtct
cccagtgcggaggatgagatgcgctcagcggcctgtggcttggtgtgtgagtgggctcag
aaggtcctcagcagacagtttgatgccgtggaggacctatctcgcttcctgctcaacagt
cactacataggaaccaagtctatggctgccctcaccatcatgactggggctcccacaggt
ctgaagactcccacgccaacctctgcgttcgttcccacgtccgaggcctcgtccttccag
ccgcaggtgaagacgctggcctctccctcggtagacgccaagcagcagctccagaggaag
atccagaagaaacagcaggagcagaagctccattcccccctgcctggagaggcccaggga
cagaaccaggccaggaggaccgaggccagcaccccagggccagctatcccctgtggaagt
cctgccctgctttcaccgcaacctaccattggtattgtggtgtcaactgtccccagcccc
atcacggtccagaggagcaggcagctgatgacatcctctagcccggtggggtcccccgag
gggaaggtcatgccaacagttaacttccaggtggtcacccacacccagtctctgacccac
agacagtcccctaaaacgccccagaacatctcagccagccccgtgggagaccgcctggct
aggcacaggtacccccagatcctccccaagccctctgccacgggggccatcaccctgcgt
tcgccccccaccctgctcatcaccaacagccccatgaaaacccaccacgtgatccagccc
cagctcagctcccacgtcaacgtggtcaagatgaccgccatctccctgaccccgagcaac
actatcagtaccagcagtaacagtatggtcctcaggccagcttcagcctcggccggggtg
ggaaccaccaccacctttaccaccatcgctgccctagaggaggtccagcaacaaggacag
agccagggaggccccacagccaccccacaatgccctgcagtacggcctggcgccccagtc
tccacagtggctcctgaggccatcatcactgacaataacccgggcgttaactctggtaaa
ctgagcacgatacagaagttccccggtgggtccaatcgtccagagagggccactaagtac
cgagcgtccagcgaaccctcgctcctggtcatatgctccccaggacctgaaagagttgcc
gccaggagcaaaagctacccttcctctagctcccctcccacctctgccaccaatgcagcg
actattagggtagagaccaagcaggacagcaataacaacagcagcaccgccaactgtcct
ttttatctgactgttgtgccctcggccaatcagaacactcctagcgtcagcagaaagtcc
tcctcgtccaatggcttatcggctgttagcctattgactgctagagactcctcctcctgt
gcgtcacgttctatgagtcctcggaagcgaaccggccctggtctggattcctcccacgtg
atccctgtgaagcgtgtcttcatctcccagcaacctttaggtgtgacctttgaccccaaa
ccagtggttaccgccgctgtcaagagggtcccagccagacaaagcacgccggcccgaccg
gagagcgccccctgtcgagtgacggtgaaacaacacctagtgcccacgcagatcctggcg
ccgtctgactcgcccgtcgcgaacgcagagatctcctccttctcctctcagactgtcagt
gtgaagccccagtcctcctcgttgctgctagttaaacaggaagaccagtcctctctaact
ccacgtctcagcactgtcagcagtcacaccagtagcactgaagcctctgggacaaccacc
accgcagtgtctgagcagcagcagcagcagcaacaacaacagcaacaacagcagaaacaa
cagcaacaggccttactacagcagatcacagcagggacagtaggagcacagcaacacgct
gaggtctctgcgatggcagtaggagcacagcaacactctgtctctgggatggcagtagga
gcacagcaacactctgtctctgggatggcagtaggagcacagcaacactctgtctctggg
atggcactaggagcacagcaacactctgaggtctctgcgatggcagtaggagcacagcaa
cactctgaggtctctgcgatggcagtaggagcacagcaacactctaaggtctctgcgatg
gcagtaggagcacagcaacactctgaggtctctgcgatggcagtaggagcacagcaacac
tctgtctctgggatggcagtaggagcacagcaacactctgtctctgggatggcagtagga
gcacagcaacactctgtctctgggatggcagtaggagcacagcaacactctgtctctggg
atggcagtaggagcacagcaacactctgtctctgggatggcagtaggagcacagcaacac
tctgtctctgtgatggggaacatgacaagcacaatgttggaagagtcagctgcagaatat
gtggaggagctgcagaaacaggccttcactcagactatcgcagcagaccacaccaagcag
caggccctgggttctacggaccaacaccaactctccaacatcatgtcccagacctcagac
tcctctgatcagttatctggcattcaccaggagatggtggactttgcctcctcagcctcc
cagcacggctccaccatggactacttctcctttaacgatgacgatatgacccaggacagc
atagtggaggaactggttcagatggaggaacagatgaagctgaaaggcctccagccgttg
ttcagtagctgtgtggataatatctctctccagggccagcctgggggcccccaggggccc
atcctcaacattcaccaccaggaggacagttcctctttctaccagtctgcccatagcagc
attacccctaccctgactccaacccctacccccacggagatgactctcggtgggcacgag
ctgaccagagagagcccctgttgccatcacagcatggcccctatcacgcccgtggagggg
cctctaggaggccgacacacccctataagcgctctgtctaactgttctagcggcatccct
cccagcccggtggagtgcaggaacccgtttgccttcacccctatcaactccagcatggca
gggggttaccacgatgcctccatggtgtctgtctcctccagtcccatcaagcccatgcag
agacccatggccacgcaccctgataaggctaaactggagtggatcaacaaccgctataac
agtagtggtactgaagctactggaggagtcggagcagggccagggtctgggttatccatc
tctaaccacagccttggtggactcctgcctagttaccaggatctagtggatgaccatttc
cgtaagccgcatgccttcgctgtcccgggccacagtggccagtctttccaggctcagtcc
agacaacaggacggcagccattttggacatctcacccccatctctccggtgcaacaacag
ttgaccagcgtatcgaccacacccaccaacacggcaagcaaacaggacgagggcttcgct
gtgcctgccccattggacagcaagggtggagccttgtcatccgggggtggggccttccgt
tgccgcagcgtcagccccgccgtgagtcagatgaccttcagcggtaccgtcacaaccccc
gacgccggcactaccactcgattggttgtctcgcagtttagttcccccatgacctcacag
gaaatactcatcattctgtccaacagccaatcggtgggcggcaacctccacagcatggcc
cagcgcagccaatcggtgcccttaaacatcatgatgcagagcgttgtggagatgcagggc
atccaggaacagaaccagagtaatgccactaagatcaccaacgtcctcctgagtaagatg
gactctgacgtgaacgacactgtgaggggcctgggcatcaacaacctcccttccaactat
accgcccgcatgaacctcacccagatgctggagacccattctcagagtcatactgcccct
gggggcttcaccactggaggagatggaggaggaggggggaacgtccaccagtctcagctg
cagactgtcagctccagccctgcctctttcgagctccagcagcatgggggttatctcacc
agtaccggaggaggcgacggggagatgagcttcaaccaagcacaatcaggtcctggtggt
gaggatgtggacctggagctacagcagatccaggagcttcaggaggcctcaggacagctc
catgcccagctactacaaacccaggctaggctgctcctgagtccccagctcctgaggccc
cagctccacactccccaggcccagctccagagtcctcatccccagctccacattccccag
gcccagctccagagtccccacacccagctccagagtccccacacccagctccagagtccc
cacacccagctccagagtccccacacccagctccacataccccagctccaaagtccacac
acccagctccagagtccccagctccagagtccccacacccagctccagagtccccacacc
cagctccagagtccccacacccagctccagagtccccagctccagattccccacccccag
ctccagagtccccagctccagagtccccacacccagctccagagtccccagttccagagt
ccccacacccagctccagagtccccagctccagagtccccacacccagctccagagtccc
cacccccagctccagagtccccagctccacattccccaggcccagctccagagaccccag
ctccagagtccccacacccagctccagagtccccagctccagattccccaagccgggttc
caactcctccagtccatcaccacccagcagcagcaacaacaacaggatgaagaagacaag
gcacaacaacagctagacttcaacaacactgttaaagacctgttaggtgacgacggcctc
aacgtccacgctgaaggcctcaaccctagctctcagctggttggtcaggtggcctcggaa
ctcaacgccgctgtggcgtccgacttcaccaacgacatcaggctgacctccgacctctcc
agtagcatcacagacctgaacacgttggacgccgacctgctgttcgatccgtccaatcaa
cagcaagaacagtacgaagacgccacactggaagagctgaagaacgatcctctgtttcag
cagatatgtagtgatactgtgaactcctcgttcgactggctggagtgcaaagaccagcct
actaccgtagagatgttgggctaa
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integrated database retrieval system