Oncorhynchus kisutch (coho salmon): 109880190
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Entry
109880190 CDS
T09179
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109880190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109880190
Spliceosome [BR:
oki03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
109880190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Terminase_5
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
109880190
NCBI-ProteinID:
XP_020328011
Ensembl:
ENSOKIG00005010790
LinkDB
All DBs
Position
LG3:30463333..30470760
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AA seq
496 aa
AA seq
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MVSVKRERELDFEDDEATVPVKVGRSSEDRRSRHCPYLDTINRSVLDFDFEKLCSISLSH
INVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDIT
YVLKPTFTRQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPLR
NYFLEEENYCGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKN
FQITKQGDAVDFLSWFMNALHGALGGTKKKPSSLTKVFQGSMRIFSKKLPHPDLPPEEKV
ALLLKEEYQEEMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNTEKEYK
TYKENFLKRFQLLKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQVT
EKNTTYDLVANVVHDGKPTEGAYRMHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQI
WKRRENEDDTTNHTGA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgtaaaacgggagagagaacttgactttgaagacgatgaagctacagtgcct
gtgaaagtaggccgttcatctgaggatcgcagaagtcgccactgtccctacctcgacaca
atcaataggagtgtgctggactttgattttgagaagctgtgctccatctcgctctcccac
atcaacgtctatgcttgtctcatctgtgggaaatacttccaaggtagaggtctgaagtcc
catgcctatactcacagtgtgcagttcacccaccatgtgttccttaatctgcacacactt
aagttctactgtctgccagataactacgagatcattgactcatcgctggaagacatcacg
tatgtactgaagcccacattcaccagacagcacatctctggattggacaagcagggcaag
ctgtatcgagcctatgatggcaccacctatctgcctggtatcgtagggctcaacaacatc
aaggctaatgactacgctaatgtggtgctgcaggccctgtccaatgtgcccccactgcgg
aactactttctggaagaggagaattactgcggcatccgtaggccacctggtgacatcatg
ttcctgctggtgcagcgattcggtgagctgatgcgcaagctgtggaaccctcggaacttc
aaggcccacgtgtcaccccacgagatgttgcaggctgtagtgctgtgtagcaagaagaac
ttccagatcaccaagcaaggggatgctgtggactttctgtcctggttcatgaatgctctg
catggtgcactgggaggaaccaagaagaaaccttcaagcctcaccaaagtgttccaaggt
tccatgcgtatattctccaagaagcttcctcacccagatttgccaccagaagagaaggtg
gctctgcttttgaaggaggagtaccaggaagagatgtcggagtccaccttcctcttcctg
acccttgaccttcccacagccccactgtacaaggatgagaaggagcagctcatcatccca
caggtccccctcttcaacatcctggccaagtttaacggcaacacagagaaggagtataaa
acctacaaagagaatttcctcaaaaggttccagttgctcaagctgcctccctatctcatc
ttctgcatcaagaggttcaccaagaacaacttctttgtggagaagaaccccaccattgtc
aactttcccatcacaaacgtagaccttcgtgagtacctgacagaagaggcacaggtcaca
gagaagaacaccacctatgacctggtggccaacgtggtgcatgatgggaagcccactgag
ggggcatacagaatgcatgtcctgcatcatggcactgggaagtggtacgagctccaggac
ttgcaggtgacggatatcctgccccagatgatcacactgtcggaggcctacattcagatt
tggaaaagaagagagaacgaagatgacacaactaaccacacaggggcgtga
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