KEGG   Oncorhynchus kisutch (coho salmon): 109880249
Entry
109880249         CDS       T09179                                 
Name
(RefSeq) contactin-1a-like
  KO
K06759  contactin 1
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109880249
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oki04515]
    109880249
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:oki00537]
    109880249
Cell adhesion molecules [BR:oki04515]
 Immunoglobulin superfamily
  Contactins
   109880249
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:oki00537]
 Others
  109880249
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig fn3 V-set Ig_DSCAM-DSCAML_C C2-set_2 Pur_ac_phosph_N CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 109880249
NCBI-ProteinID: XP_020328064
Ensembl: ENSOKIG00005036971
UniProt: A0A8C7JIP4
LinkDB
Position
Unknown
AA seq 1040 aa
MAVTALVLLVLSSSLSHTEAVLFGEPRIFGDDATGYGPIFEEEPLDIVYTKESPDRLISM
NCRARANPAPTYRWRRDNWEIKLMELPNEHYSLVGGNLIINNPEEKKHAGTYVCVAKNVY
GTVISKEAKVKFGYLEEFPDEERDPVTVKEGQGAVLLCAPPKRWPTEVTFRWIYNEFPVF
LHPDKRRFVSQSTGNLYISKVEASDAGNYSCYVFNPQIGKGVYSKFIPLISTEETPEKRY
KADLVVKFPDTTAMLNYNVTLECFALGNPAPHIVWRKIGATDLPASAQVSMSGALLHLYN
VQYEDSAGYECEAINQKWQDWHQAWLYVEAAPEWAVTINNTQKDVGSEHTMSCVANGKPG
PYIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENYWGIIYASAELRVIACAPTFELNP
VKKYLLGANNGRVVIECKPRAAPRPRFTWTKGKEVLFNNSRISIMFDGSLEILNATRNDE
GVYTCLAENDRGKANSTGTLTITEATQITVAPEDTQVMVGEEVHLQCQASFDPSLDITFI
WSLDFRVIDFYLEWKHYERIMDREDSGELKIMNVQLRHEGRYTCTAQTVVDNVTASADLK
VKGLPAPPGGVRVEEIRDTSVKLVWNRGADHGNPILGYTIQTRDVYALTEVDWRDASTSP
TALDGMSVMADVVDLYPWMEYEFRVYATNEFGDGEASIPSMKIKTWDAVPVVAPTNVGGY
GGKDGELIITWTPVQPQYFYGKKFGYVVAFKPHDDVDWWYETISDPETRRYVHRDSSFRV
KSNDFQVREFQVKVKTFNSKGDGPYSLSTTIYYPRDVPSESPTDVYSRPVSSHEALVWWI
PVMDTGTGLQQYIDGYQVKYWRKYDDTEPGANRIFVPASMNQTRLENMLPDSHYLIEVRA
YNGAGVGPPSEHCEMFTKRAPPSVAPQMWRYISYSGKWLYVWWHHISYDWFGNESFPLYY
KVMFRKTGYITGPIYMTGWHFIDFPMPQVGDYELEVRGRYEGGDGPIRKIRLQGKASFLR
PTLSLAAMLLLALCIVGLGI
NT seq 3123 nt   +upstreamnt  +downstreamnt
atggctgtcacagccctggtcctgctagttctctcctcctcactgtcacacactgaggcc
gtattgtttggtgagcccaggatctttggagatgacgctactggctacggtccaatattt
gaagaggagcctctggatatcgtctacacaaaggagtcccctgacagacttatctccatg
aactgtagagcacgggccaaccctgcacccacataccgatggaggcgtgataactgggag
atcaagctgatggagctgcctaatgaacactacagtctggtgggagggaacctcatcatt
aacaaccctgaagagaagaaacatgcagggacctacgtctgtgtcgccaagaacgtgtac
ggcaccgtcatcagcaaggaggccaaggtcaagtttggatacctggaggagttcccagat
gaagagagagaccctgtgaccgtgaaggagggccagggtgccgtgctgctctgtgctcct
cccaagcgatggccaactgaggtgacgttccgttggatatacaacgagtttccggtcttc
ctccacccggataagcgtcgcttcgtctctcagagcaccgggaatctgtacatctccaag
gtggaggcgtcagacgcagggaactactcctgctatgtgttcaacccacagattggcaag
ggagtctactccaagtttatccctctcatatctacagaggagaccccagagaagagatac
aaggccgacctcgtagtaaagttccctgacaccacagctatgctcaactacaacgtcaca
ctggagtgcttcgctctgggaaatccggcccctcatatcgtctggaggaagataggtgct
accgacctgcctgccagcgctcaggtcagcatgtctggagcgctgctccacctctacaac
gtccagtatgaagactcagcagggtacgagtgtgaggccatcaaccagaaatggcaagac
tggcatcaggcctggctctatgtagaggctgctcctgagtgggctgtgaccatcaacaac
acccagaaggacgtagggtcagaacacaccatgtcctgtgtagctaatgggaagcctggc
ccatacatccgatggctcaaggatggatactcgtatggtaaaggtgagctgaaattctcc
agtctgacgtttgaggactctgggatgtaccagtgtatcgctgagaactactggggtatc
atctacgccagcgctgagctacgtgtcattgcttgtgccccgacgtttgagttgaaccca
gtgaagaagtatcttctaggagctaacaacggccgtgtggtcatagagtgtaagcccaga
gctgcccccagacccaggttcacctggaccaagggaaaagaagtgctcttcaacaactca
cgtatctccatcatgtttgatgggagtctggagatcctgaatgccaccaggaatgatgag
ggggtgtacacctgcttagctgagaatgacagagggaaggccaacagtacagggactctg
accatcacagaggcgacacagatcacagtagccccagaggacactcaggtgatggtagga
gaggaggtgcatctgcagtgccaggcctcctttgaccccagtctggacatcaccttcatc
tggtctctggatttcagggtcatcgacttctacctagagtggaagcactatgaacgcatc
atggatcgtgaggacagtggagagctgaagataatgaatgtccagttgagacacgaggga
cgctacacctgtacagcccagactgtcgtggacaacgtcaccgcgtcagcagacctcaag
gtcaaaggtcttcctgctcctcccggtggggtgagggttgaggagatcagggacacctcg
gtgaagctggtgtggaaccgaggggccgaccatggcaaccccatccttgggtacaccatc
cagaccagagacgtctacgcactaactgaagtggactggagggacgcatccacctcccct
acggccctggatggcatgtcagtgatggctgatgttgtggacctgtacccctggatggag
tatgagttcagggtctatgctactaatgagtttggagacggggaggccagcatcccttca
atgaagatcaaaacctgggacgcagtgcctgtggtggccccgaccaacgttggaggctac
gggggtaaagatggagagttgatcatcacatggacacccgtacagccacagtacttctac
ggtaagaagtttggctacgttgtggccttcaagcctcatgatgatgttgactggtggtat
gagaccatatcggacccagagacacgacgctacgtccatcgagactcctctttcagggtc
aagtcgaacgacttccaggtcagggagttccaggtgaaggtgaagacgtttaactccaaa
ggagatggaccctacagcctgtcgaccactatctactacccacgagatgtcccctctgag
tctcctacagatgtatactccaggcctgtctcgtcccatgaagctctggtctggtggata
ccagtcatggacactggtaccggccttcagcagtacatagatggataccaggtgaagtac
tggaggaagtatgacgatacagagccgggggccaatcgaatctttgtgcccgcctccatg
aaccagaccaggctggagaacatgctgccagactcccactacctcatcgaggtcagagcc
tacaacggagccggtgtcggccctcccagcgaacactgcgagatgttcaccaagagagca
cctccaagtgtggctccccaaatgtggcgttacatcagctactctggcaagtggctgtac
gtgtggtggcaccacatctcctacgactggtttggcaatgagtccttcccactatattat
aaggtgatgttcaggaagactggctacatcacagggccgatctacatgacgggctggcac
ttcattgacttccccatgccccaggtaggggactacgagctggaggtcagaggtcgctat
gagggtggagacggccccatcaggaagatcaggcttcagggtaaggcgtctttcctgaga
cccactctcagtctggccgccatgctactgctggccctgtgcatcgtgggattggggata
tag

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