Oncorhynchus kisutch (coho salmon): 109880249
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Entry
109880249 CDS
T09179
Name
(RefSeq) contactin-1a-like
KO
K06759
contactin 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109880249
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
109880249
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oki00537
]
109880249
Cell adhesion molecules [BR:
oki04515
]
Immunoglobulin superfamily
Contactins
109880249
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oki00537
]
Others
109880249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
109880249
NCBI-ProteinID:
XP_020328064
Ensembl:
ENSOKIG00005036971
UniProt:
A0A8C7JIP4
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MAVTALVLLVLSSSLSHTEAVLFGEPRIFGDDATGYGPIFEEEPLDIVYTKESPDRLISM
NCRARANPAPTYRWRRDNWEIKLMELPNEHYSLVGGNLIINNPEEKKHAGTYVCVAKNVY
GTVISKEAKVKFGYLEEFPDEERDPVTVKEGQGAVLLCAPPKRWPTEVTFRWIYNEFPVF
LHPDKRRFVSQSTGNLYISKVEASDAGNYSCYVFNPQIGKGVYSKFIPLISTEETPEKRY
KADLVVKFPDTTAMLNYNVTLECFALGNPAPHIVWRKIGATDLPASAQVSMSGALLHLYN
VQYEDSAGYECEAINQKWQDWHQAWLYVEAAPEWAVTINNTQKDVGSEHTMSCVANGKPG
PYIRWLKDGYSYGKGELKFSSLTFEDSGMYQCIAENYWGIIYASAELRVIACAPTFELNP
VKKYLLGANNGRVVIECKPRAAPRPRFTWTKGKEVLFNNSRISIMFDGSLEILNATRNDE
GVYTCLAENDRGKANSTGTLTITEATQITVAPEDTQVMVGEEVHLQCQASFDPSLDITFI
WSLDFRVIDFYLEWKHYERIMDREDSGELKIMNVQLRHEGRYTCTAQTVVDNVTASADLK
VKGLPAPPGGVRVEEIRDTSVKLVWNRGADHGNPILGYTIQTRDVYALTEVDWRDASTSP
TALDGMSVMADVVDLYPWMEYEFRVYATNEFGDGEASIPSMKIKTWDAVPVVAPTNVGGY
GGKDGELIITWTPVQPQYFYGKKFGYVVAFKPHDDVDWWYETISDPETRRYVHRDSSFRV
KSNDFQVREFQVKVKTFNSKGDGPYSLSTTIYYPRDVPSESPTDVYSRPVSSHEALVWWI
PVMDTGTGLQQYIDGYQVKYWRKYDDTEPGANRIFVPASMNQTRLENMLPDSHYLIEVRA
YNGAGVGPPSEHCEMFTKRAPPSVAPQMWRYISYSGKWLYVWWHHISYDWFGNESFPLYY
KVMFRKTGYITGPIYMTGWHFIDFPMPQVGDYELEVRGRYEGGDGPIRKIRLQGKASFLR
PTLSLAAMLLLALCIVGLGI
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcacagccctggtcctgctagttctctcctcctcactgtcacacactgaggcc
gtattgtttggtgagcccaggatctttggagatgacgctactggctacggtccaatattt
gaagaggagcctctggatatcgtctacacaaaggagtcccctgacagacttatctccatg
aactgtagagcacgggccaaccctgcacccacataccgatggaggcgtgataactgggag
atcaagctgatggagctgcctaatgaacactacagtctggtgggagggaacctcatcatt
aacaaccctgaagagaagaaacatgcagggacctacgtctgtgtcgccaagaacgtgtac
ggcaccgtcatcagcaaggaggccaaggtcaagtttggatacctggaggagttcccagat
gaagagagagaccctgtgaccgtgaaggagggccagggtgccgtgctgctctgtgctcct
cccaagcgatggccaactgaggtgacgttccgttggatatacaacgagtttccggtcttc
ctccacccggataagcgtcgcttcgtctctcagagcaccgggaatctgtacatctccaag
gtggaggcgtcagacgcagggaactactcctgctatgtgttcaacccacagattggcaag
ggagtctactccaagtttatccctctcatatctacagaggagaccccagagaagagatac
aaggccgacctcgtagtaaagttccctgacaccacagctatgctcaactacaacgtcaca
ctggagtgcttcgctctgggaaatccggcccctcatatcgtctggaggaagataggtgct
accgacctgcctgccagcgctcaggtcagcatgtctggagcgctgctccacctctacaac
gtccagtatgaagactcagcagggtacgagtgtgaggccatcaaccagaaatggcaagac
tggcatcaggcctggctctatgtagaggctgctcctgagtgggctgtgaccatcaacaac
acccagaaggacgtagggtcagaacacaccatgtcctgtgtagctaatgggaagcctggc
ccatacatccgatggctcaaggatggatactcgtatggtaaaggtgagctgaaattctcc
agtctgacgtttgaggactctgggatgtaccagtgtatcgctgagaactactggggtatc
atctacgccagcgctgagctacgtgtcattgcttgtgccccgacgtttgagttgaaccca
gtgaagaagtatcttctaggagctaacaacggccgtgtggtcatagagtgtaagcccaga
gctgcccccagacccaggttcacctggaccaagggaaaagaagtgctcttcaacaactca
cgtatctccatcatgtttgatgggagtctggagatcctgaatgccaccaggaatgatgag
ggggtgtacacctgcttagctgagaatgacagagggaaggccaacagtacagggactctg
accatcacagaggcgacacagatcacagtagccccagaggacactcaggtgatggtagga
gaggaggtgcatctgcagtgccaggcctcctttgaccccagtctggacatcaccttcatc
tggtctctggatttcagggtcatcgacttctacctagagtggaagcactatgaacgcatc
atggatcgtgaggacagtggagagctgaagataatgaatgtccagttgagacacgaggga
cgctacacctgtacagcccagactgtcgtggacaacgtcaccgcgtcagcagacctcaag
gtcaaaggtcttcctgctcctcccggtggggtgagggttgaggagatcagggacacctcg
gtgaagctggtgtggaaccgaggggccgaccatggcaaccccatccttgggtacaccatc
cagaccagagacgtctacgcactaactgaagtggactggagggacgcatccacctcccct
acggccctggatggcatgtcagtgatggctgatgttgtggacctgtacccctggatggag
tatgagttcagggtctatgctactaatgagtttggagacggggaggccagcatcccttca
atgaagatcaaaacctgggacgcagtgcctgtggtggccccgaccaacgttggaggctac
gggggtaaagatggagagttgatcatcacatggacacccgtacagccacagtacttctac
ggtaagaagtttggctacgttgtggccttcaagcctcatgatgatgttgactggtggtat
gagaccatatcggacccagagacacgacgctacgtccatcgagactcctctttcagggtc
aagtcgaacgacttccaggtcagggagttccaggtgaaggtgaagacgtttaactccaaa
ggagatggaccctacagcctgtcgaccactatctactacccacgagatgtcccctctgag
tctcctacagatgtatactccaggcctgtctcgtcccatgaagctctggtctggtggata
ccagtcatggacactggtaccggccttcagcagtacatagatggataccaggtgaagtac
tggaggaagtatgacgatacagagccgggggccaatcgaatctttgtgcccgcctccatg
aaccagaccaggctggagaacatgctgccagactcccactacctcatcgaggtcagagcc
tacaacggagccggtgtcggccctcccagcgaacactgcgagatgttcaccaagagagca
cctccaagtgtggctccccaaatgtggcgttacatcagctactctggcaagtggctgtac
gtgtggtggcaccacatctcctacgactggtttggcaatgagtccttcccactatattat
aaggtgatgttcaggaagactggctacatcacagggccgatctacatgacgggctggcac
ttcattgacttccccatgccccaggtaggggactacgagctggaggtcagaggtcgctat
gagggtggagacggccccatcaggaagatcaggcttcagggtaaggcgtctttcctgaga
cccactctcagtctggccgccatgctactgctggccctgtgcatcgtgggattggggata
tag
DBGET
integrated database retrieval system