Oncorhynchus kisutch (coho salmon): 109880265
Help
Entry
109880265 CDS
T09179
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03040
Spliceosome
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109880265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109880265
Spliceosome [BR:
oki03041
]
Common components
Common spliceosomal components
SR proteins
109880265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
109880265
NCBI-ProteinID:
XP_020328075
Ensembl:
ENSOKIG00005017165
LinkDB
All DBs
Position
LG21:39339141..39345111
Genome browser
AA seq
327 aa
AA seq
DB search
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGRFPDRYGRGSQDSRRTNQPSGPPAD
RNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLK
NALEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRSRNRSPSRSRTPRRSRSH
SPKARSPKRDYKRSRSRSHSGSPAPRAAAPGSPPPRAKETSSSSSSKRPSKPSKSASPNS
PPPAQRAPSRSPSRSRGSRSPSTDSRH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgcatatttgtcggccggttgaacccgtccgccagagagaaggacgtg
gagagattcttcaaaggatacggccgcatccgagacatcgacctcaagaggggctttggt
tttgtggagtttgatgatcctagggatgctgaggatgcagtttatgagttggacggcaag
gagctctgcaatgagagggtgaccattgagcatgctcgtgtgcgcctgcgtggtgggcga
ggacgtggtggtgacagagggggaggaggaggaggaggaggaggccgcttcccagatcgc
tatggccgtggctcccaggatagtcggaggaccaaccaaccaagtggaccaccggcagat
aggaaccccccaccgatgcgtacagagaaccgtctcatcgtggagaacctgtcatctcgc
gtcagctggcaggacctgaaggatttcatgagacaggctggggaagtcacgtttgcagac
gcacaccgccccaagctcaacgaaggggtggttgagttcgcttcttacagcgatctgaaa
aacgcccttgagaagctgtctggcaaggagatcaatggaaggaaaatcaagctgatcgag
gcagctaagaagaggggttccaggagtcgttcccgctctgagagctcttctcgttctcgc
tcccgttctcgtaaccggtccccgtcccgctccaggacccctcgtcgttccaggtcccac
tcccccaaagcccgctcccccaagagggactacaaacgctctcgttctcgttcccacagc
ggctccccagcgccccgtgctgctgcccctggctccccacccccgagggccaaagagacc
tcttcctcctcctcctctaaacggccctctaagcccagcaagtctgcctcccccaactcc
cctccccctgcacagcgtgcgccttccaggtctccttccaggtctcgtggctctcgctct
ccgtctacggacagccgccactga
DBGET
integrated database retrieval system
