Oncorhynchus kisutch (coho salmon): 109880311
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Entry
109880311 CDS
T09179
Name
(RefSeq) girdin-like isoform X1
KO
K25392
girdin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oki03037
]
109880311
Cilium and associated proteins [BR:
oki03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109880311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
DUF4472
INO80F
Motif
Other DBs
NCBI-GeneID:
109880311
NCBI-ProteinID:
XP_031655434
Ensembl:
ENSOKIG00005027884
UniProt:
A0A8C7HZ14
LinkDB
All DBs
Position
LG20:complement(48886465..48920619)
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AA seq
1859 aa
AA seq
DB search
MESEVFLPHLEQFMLSPLVIWVKTFGQNDGNMTLDYSELLDGVVLNKIMFQINPKATFPS
VNKVIDDPSQRILNLTALIRQIKTYYLETLRQLIMMPLPSVLLLGRTPHCEQSLEEMKKL
LLLLLGCAVQCEKKEEYVERIQTLDFDTKAAIAAHIQEVTHSQDSVLDLHWLEASELCAE
DLETLFRRLVDQRDTQLETILELMQERESTPSPSPPSTQSPSDCPSMQQLAASHQHLSVE
LADSKAKVRRLRQELEEKSEQVLDCRQELENMEAEFKRIQQENSVLLAEARSARTYRDEL
DALRERAIRADKLESEVGRYREKLHNMEFYKAKVEELKEDNSVLLETKAVLQQQLEGWRA
RSDKLHQLEKHSLLLNARVHIMEQEKEVDRRRMEELQEENLALELAQRRSMEESQHLGWE
LEQLSRSPDNSQGQKSLGEEVVEGTRSRLLRLERENQSLLRTIEELRAPDLSLGPQHNHN
HEHTRRDGQRPTNTAEVVREYLGSLDNTSWEQSELVIKEDCDIDIDTSHHRDPKCKGVSV
DLEGEIDRLERESETLKEKMDLQKQEKGQLEDRESCDLSDPMADLEAEAKDNTRNLLQPG
ASVSLTRDTSPCSKNKSPRRENSSTEMQTRASSSSTKHTERLEAKCRALDTENQRLQAAL
DNTGRKLHRLEAEVHELEAENQILQAGLEELRISSRRMEQLGQEKQTLEQEASCLERDKR
RLEKENRRLRQQAEIQDSTLDGSNLRVASLERENRGMGKEVERLKEVEERVKGLERDNRE
LAKQGAINQRALVTLREELVSDKLKTQQRENELERLAHELEMRVLNQDTSPQSDEETPDN
SRFKMLESELESSLKRSLQIKEDKMAAVEARLQESSTLNQQLRQELKTVRLNYEALLQRE
EEEHAACSPTPQRESDRAVSEWQWESQEATRELLRVKDRLIEVERNNATLQAERQALQVQ
LRQLETQSDGLQAQILALQRQTASLQENNTALQTHNANLQVEKSTLNSQSASLLAQNAQL
QCQQSSTEGDKEVAMREREELRGVHDQLLRDHERLAALHERQAMDYEALMGKHGSLKNAH
RTLELEHRTLEDRYKTLLQQKAKLAGLEKALREEQDKMSVEKEQHRTTASECRQLRDEKD
WLNQTYRQLLKDQEELQADHKNMKTLLNSTKLEQTKLESDFNKLREQYQQIDITSTKLTN
QCELLSQLKGNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQHIDKLNELRR
QKEKLEEKIMDQYKFYDPSPPRRRGNWIALKMRKLMKPRSRERCGPASSSDHHRSLTPTR
SGSFEALPPTSPSASCCQDNGSFVGSDGSGGSTTSPRRSSTPALNDLDKLNDLVYPSTLS
EDPEQLEGSGVTNDRSRKESMTSSMSDSILSIINHQHQPTTTPLFYPTTTAAAAATDGNE
RCLTDKDCNDSAVAADFDDGDELQNRGLNGVPSRAQSQSSGEFSLSLDNEPWSNGSSPVQ
PPPSSRRSSSSCLPPSDTSTPRHTRQNPSPTTHTQQRSTSLTHTSSNKHRERVGVKNSSP
IAIANTQGSVPCRGREVGSTQDPWPRRSVLRRCASGSRAPQRPSDGNVPKTAVLRRTGLG
LNKAPETTSTRASAMSPTTVLYVQGESSSVSGCLNCFSTPLGKEVRLRGPWSPASLPRAS
SVISTAEGSSRRSSVNSDSRVMAKVDPLPIIESDGSPNQETDTVNQNQNKQNNPEERDTD
NQPPPPNKPPRDPAVATDRPKSTCQESLFGGTPFNLDSVFSDTIFSESVVTTTTSNNSNN
NDKNHTFLYLNPELERNISFPPLSPESTNGTALGRMDNVHSQNGGQEDCESNTVEITPC
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaggtttttctcccccatctggagcaatttatgctcagcccgcttgtcatt
tgggtgaagacatttgggcaaaacgatgggaacatgacattggattattccgagttactg
gatggggtcgttttgaacaagatcatgtttcaaataaatcccaaagcgacttttccgagc
gtcaacaaagtgatcgacgaccccagtcagaggattctgaacctgaccgctctcatccgt
caaatcaaaacctattacctagagactctgaggcagctgatcatgatgcccttacccagt
gtgttgctgcttggcaggactcctcactgtgagcaaagtttggaggaaatgaagaaatta
cttcttctcttattgggatgtgctgtccagtgtgagaagaaagaggagtacgtcgaacgc
atccagactctcgactttgacacgaaagcagcaatagctgctcatatacaagaggttacc
cacagtcaggacagtgtactggacctccattggctggaggccagcgagctctgtgctgag
gacctagagaccctgttcaggcgtctggtggaccagagagacacacagctggagactatt
ttagagctaatgcaggagagagagtccaccccgtcaccttctccgcccagcacccagtcc
cccagtgactgtcccagcatgcaacagctggcggcctcccaccagcacctgtctgtggag
ctggccgactccaaggccaaggtcagacggctgcgccaggagctagaggagaagagtgag
caggtactggactgtagacaggagctggagaacatggaggctgagttcaagaggattcaa
caggagaactctgtgttgctagcggaggcccggtcagcccgtacataccgtgacgagctg
gatgccctgagagagagggccatcagggctgacaagctggagagcgaggtgggacgatac
cgcgagaagctgcacaacatggagttctacaaggccaaagtggaggagctgaaggaggat
aactctgtgttgctggagaccaaggctgtactgcagcagcagctggaggggtggagggcc
cgctctgataaactacaccagctagagaaacacagtctgctgctcaacgccagggtccac
atcatggaacaggagaaggaggtggacaggaggcgcatggaggagctgcaggaggagaac
ctggccctggagctggcccagaggaggagcatggaggagtcacagcacctgggatgggag
ctggagcagctgtccaggagccccgacaactcacagggtcagaagtctctgggtgaggag
gtggttgaggggaccaggagtcgtctgctgcggctagagagagagaaccaaagcctgctc
aggaccatagaggaactgagagctcctgacctcagcctgggaccgcagcacaaccataac
catgagcacacgcggagggacggccagcgacccacgaacacggctgaggtggttagagag
taccttggcagtttagacaacacctcctgggagcagtctgaattggtcatcaaagaggat
tgtgacattgacatagacacatcacatcacagggacccaaagtgcaaaggagtgtcggtt
gacctagaaggagagattgaccgactggagcgagagagcgagaccctcaaggagaagatg
gaccttcagaagcaagagaaaggccaactcgaagacagagagtcttgcgatctgagtgac
cccatggctgacctggaagcagaagctaaagacaacacccgcaatctccttcaaccaggc
gcttcagtgtctctgactcgtgatacctcaccctgctctaagaacaagagtccacgtcgg
gagaacagtagcacggagatgcagacaagggcttcctcttcatccacgaagcacacagag
cgtctggaagccaagtgtagagccctggacacagagaaccagcggcttcaggctgccctg
gacaacacaggccggaagctccatcggctggaggccgaggtccacgagctggaggctgag
aaccagatcctgcaggctgggctggaggagctgaggatctcctcgcggcgcatggagcag
ctaggtcaggagaagcagaccctggagcaggaggcttcttgcctggagagagacaagagg
aggctggagaaggagaaccgcaggctgaggcaacaggcagagatccaggactctaccctg
gatgggagcaacctgagggtggctagtctggagagagagaacagggggatggggaaggag
gtggagaggctgaaggaggtggaggagagggtcaaggggctggagagggataacagagag
ctggccaagcagggagcgatcaaccagagggccctggtcaccctgagagaggagttggtg
agtgacaagctgaagacccagcagagggagaatgagctggagaggctggcccacgagctg
gagatgagagtcctcaaccaggacacgtcaccacagagtgacgaggaaactccagacaac
agtaggttcaagatgttggagtctgagctggagtcgtctctgaagaggtccctgcagatc
aaagaagacaagatggctgccgttgaggctcgtctgcaggagtcctccaccctcaaccag
cagctacgtcaagagctcaagactgtacgtctgaactacgaagccctgctgcagagggag
gaggaggagcatgcggcctgtagccccacccctcagagggagagtgacagggcggtaagc
gaatggcagtgggagagccaggaggccaccagggagctgctgagggtcaaggaccgcctc
atcgaggtggagaggaacaatgccacactgcaggcagagcgtcaggcactgcaggtccag
ctcagacagctggagacccagtcagacggcctgcaggctcagatcctggccctgcagaga
cagaccgcctccctgcaggagaacaacacggctctccagacacacaacgctaacctgcag
gtggagaagtccactctgaactcccagagtgcatcactcctggcccagaacgctcagctc
caatgccaacaatccagcaccgagggtgataaggaggtggccatgcgtgagcgcgaggag
ctgcgcggcgtgcacgaccagctcctgagggaccacgagaggctggcggcgctgcacgag
agacaagccatggactacgaggccctgatggggaaacacggttctctgaagaacgcccac
cgcactctggagctggagcatagaacgctggaggacaggtacaaaaccctgctgcagcag
aaggccaaactagcgggtctggagaaggctctgagagaggagcaggacaagatgtctgtg
gagaaggagcagcacaggaccaccgcctcagagtgtcgacagctccgggatgagaaggac
tggctgaaccagacataccgtcagctgttgaaggatcaggaggagctccaggcggaccat
aagaacatgaagaccctgctgaacagcaccaagctggagcagaccaagctcgagtccgac
ttcaacaagctcagagagcagtaccaacagatagacatcaccagcaccaagcttaccaac
cagtgtgagctgctgagtcagttgaaggggaacctggaggaggagaaccggcacctgctg
gaccagatccagaccctgatgctgcagaaccgcaccctgctagaacagaccatggagagc
aaggacctgttccacgtagaacagagacagcacatagacaagctgaatgagctgaggaga
cagaaggagaagttggaggagaagatcatggaccagtataagttctatgacccctcaccc
ccacggaggcgtgggaactggatcgccctgaagatgaggaagctgatgaagccgaggagc
cgcgagcgttgtggccccgcctcctcttctgaccaccatcgctccctcacccccacacgc
tccggctccttcgaggccctcccgcccacctccccctctgcttcctgttgccaggacaac
ggctccttcgtgggttcggacggctcgggtgggtccaccacttccccccggaggagcagc
accccagccctgaatgacctggacaaactgaatgacttggtgtacccctcaacactgtct
gaggaccctgagcagctagaggggtcaggggtcacaaatgacagatccaggaaggagtct
atgacctcatccatgagcgactccatcttgtccatcatcaaccatcaacaccagcccacc
accactcctttgttttatcccaccaccactgctgctgccgctgccactgatggcaatgag
cgatgtttgacagacaaggattgtaatgacagtgctgtggcagctgactttgacgacggg
gatgaactacaaaaccgcggtctgaatggcgtgccgagccgtgcccagagccagagcagt
ggagagttcagcctcagcctagacaacgaaccctggtccaacggcagtagcccggtccag
ccgcctccgtcatcccgccgctcctcttcctcctgccttccgcctagcgatacctccacc
ccccgacacacacggcagaacccctcgccaaccacacacacacagcagcgatccacttcc
ttaacacacaccagcagcaacaaacacagagagagggtaggagttaagaactcctcacct
attgccatagcaaacacccagggttcagttccctgtagggggagggaggtgggtagcacc
caggacccctggcccagaaggagtgtcctcaggaggtgcgccagcggcagcagagccccc
cagcgcccttccgatgggaatgtccccaaaacagccgtactacgtcgaactggattaggt
ctgaacaaagctccagagaccaccagcacccgagcctcagccatgtccccgaccacggtg
ctctacgtccagggtgaatcttcctcggtgtctgggtgtctcaactgtttctccaccccg
ttggggaaggaggtgcgtctgagagggccatggtctcctgcctctctaccccgggccagt
agcgtcatctcaacagccgagggttcctcgcgacgatccagtgtcaacagtgactctagg
gtgatggcgaaggtagatcccttacctatcatagaatctgatgggagcccgaatcaggag
acggacacggttaatcagaatcagaacaagcagaacaatccagaagaacgagacactgat
aatcaaccaccaccaccgaacaaaccccccagagacccagcggtagccaccgatcgaccc
aaatccacctgccaggaatccctcttcggtggcaccccgttcaacctagactctgtcttc
tcagacactatctttagcgagtcggtagtcaccaccactactagtaacaacagcaataat
aacgataagaaccatactttcctctatctgaacccagaactggagcgtaacatcagtttc
ccacccctgagtccggagtccactaacggcacggcactgggacgcatggacaatgtacat
agccaaaatggaggacaagaagactgtgagagtaatactgtggaaatcactccgtgctga
DBGET
integrated database retrieval system