Oncorhynchus kisutch (coho salmon): 109880413
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Entry
109880413 CDS
T09179
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109880413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oki03009
]
109880413
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-60S particles
RNases
109880413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
Phosphodiest
Motif
Other DBs
NCBI-GeneID:
109880413
NCBI-ProteinID:
XP_031666854
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MEPQVCLKRKRESSPTPESSKRVKETDGNKVPESEHRSGSRPPRLSLPFDRLQEPVTLKD
LTELLQFAALGNTGGLKQPSWCRLHHQKNVSGVSVILLEGLSQAHFYRHYQYFKHLRTKY
TSRHSYTPSPGNMISEIFSSEVVNNSPADALGDQKSAQPEGGLQWHPVIRKFGLETRGLT
GYLLTQEEMIKKHFPVRGMPGSEGFVCTDSDDRVTDSSPLYGLDCEMCLTEWGNELTRIS
LVDSRGSCVLDELVKPPNRILHYLTQFSGITRAMLQPITTTLREVQSKLKKVLPRDAVLV
GHSLENDLRALNLIHPHVIDTSLLYRREFGRRFKLKVLAETVLKKQIQTEERKGHDPTED
AQAALELAQYFIHTGPRQVVELYCEELWGVSPTMYQPPVNRATSTHNNNSSLRFAEALKS
SGQSAVFIGKRADNTLDLSNQQWHSSDREVLSSFKRGLDSHSFSIVQLSSFSDHLKAMIS
TDQHYHTMSQRLREMCVVFAGPLPSDYTERAVRRLFSSCGNVRAVRLLNATQRVHAEVEF
ELLEGAVLAVEMLNGTLLHSGHIVKVQRPVKKSTLDLDVFLSSLQDDPLNANVIYAAGLK
ANAKTAQFAAKVNGTGLNANAAAEVNETGLNANIAALPAKVNRARLHAKANHSGLLEKVN
GTFLNAKAKLAEANGPGLHAKAKFAKLAELSVEVNGTLLQVKTMLAEIAAEANVGARLHA
KTAGLCEEDLREAFGQYGTVQGVILPAKHSRKQKRRRHAFLKYDSPDTVDAVLSSPVELW
DRKVSTRRALTPPHLCSWVTMTTTTGSDRETLDESSQETGREEQEVACAMRKLDRRVGKL
FRSLPDNTLSIVLLPGHNSSHGDGLCFLEVKQGSAALSNHAHDLMLPA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggagccacaagtctgtctcaagagaaagagggaatcttccccaacaccagagagcagt
aaaagagtgaaagagacagatggtaacaaagttccagagtctgagcaccgttccggttcc
cgacccccgcggctctctctgccgtttgaccgtctccaggaaccggtcacgttgaaagat
ctgacggaactgcttcagtttgctgctctggggaacaccggtgggctgaaacaacccagt
tggtgtcgcctccaccaccagaagaatgtgtcaggggtgagcgtgatccttctagaagga
ctgagccaggcccacttctacagacactaccagtactttaaacacctccgcaccaagtac
acctctagacacagttatactccatcgcctggcaacatgatttctgagatatttagcagt
gaagttgtcaacaacagtcctgccgatgcgctaggagaccagaagagcgctcagccagag
ggaggtctgcagtggcacccagtgatcaggaagtttggtctggagaccagagggctgact
ggatacctcctcacccaggaggagatgatcaagaaacacttccctgtccgcggtatgcct
ggcagtgagggctttgtgtgtacagacagtgacgaccgtgtgactgacagtagtcctctc
tatggtctggactgtgagatgtgtctgacagaatggggcaacgagctgacacgcatctct
ctagtagacagcagagggagctgtgttctggacgagctggtcaaacctcccaaccgcatc
ctacactaccttacacagttctctggtatcacccgtgcaatgctgcagccaatcaccacc
accctgagagaagtccaatcaaagctcaagaaagtgttgccccgggacgcggtcctggtt
ggccactcccttgagaacgacctcagggccctgaacctgatccacccccatgtgattgac
acctccctgctgtacaggagagagtttggacggaggtttaaactcaaggtgctggctgag
accgtgctcaagaagcagatccagacggaggagaggaagggtcatgaccccacagaggac
gcccaggctgccctggaactggcccagtacttcatacacactggaccacgacaggtagtg
gagctgtattgtgaagagctgtggggtgtgagtcctaccatgtaccagcctcctgtcaac
agagcaacatctacacacaacaacaacagctctctcaggtttgcagaggccctgaagagt
tctggccaatcagccgtgtttatagggaagcgtgctgacaacaccctggatctgtccaat
cagcagtggcacagctccgacagagaggtcttgtcttcctttaaaagaggactagactct
cactcgttcagcattgtccagttgtcttccttctctgaccatctgaaggctatgatctct
actgaccagcactaccacacgatgtctcagcgtctgagagagatgtgtgtggtgtttgca
gggccgttgcctagcgactacacagagagggctgtgaggaggctgttcagcagctgtgga
aacgtacgagctgtcaggctgttgaacgccactcagagggtgcatgcagaggtagagttt
gagctgctggagggagctgtgctagctgtcgagatgctcaacggaacactgctacacagc
ggacacatcgtcaaggtccagagacctgtaaagaagtccacgttggatctggacgtcttt
ctgagttccctgcaggatgacccgctaaatgctaacgtcatctacgccgcagggctaaag
gctaatgctaaaacagcacagtttgcagccaaagtgaacgggactgggctaaatgctaat
gcagcagctgaagtcaatgagactgggctaaatgctaacatagcagcactcccagctaag
gtcaatagagctaggctacatgctaaagcgaaccattcggggctcttagagaaagtcaat
ggaacttttctaaatgctaaagctaagctagctgaagcgaatggacctgggctacatgct
aaagctaaatttgctaagctagcagagctctcagttgaagtcaatggcactctgctccaa
gtgaaaactatgctagcagagatagcagccgaagccaatgttggagcgaggctccatgct
aagactgccggactctgtgaagaggacctccgcgaggccttcggacagtacggaacggtt
cagggtgtaattctacctgcaaagcactctaggaaacagaaacgtaggaggcatgctttc
ttaaagtatgatagtcctgacactgtggacgcggtcctcagctcacctgtggaactctgg
gacaggaaggtgagcactcgcagagccctgactccgccccacctgtgctcctgggttact
atgacgacgacgactgggtccgacagagagacactggacgagtcgtcgcaggaaaccgga
agagaggaacaggaagtggcgtgcgcgatgaggaagttggaccggcgcgtggggaagctg
ttcagatctctacctgacaacaccctcagcatcgtactgctgcctggtcacaacagttcc
catggcgatggtctgtgtttcctggaggtcaaacaggggtcagcagcactcagtaaccac
gcccacgacctgatgctacctgcatag
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