KEGG   Oncorhynchus kisutch (coho salmon): 109880491
Entry
109880491         CDS       T09179                                 
Symbol
polr2k
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC4
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03020  RNA polymerase
oki03420  Nucleotide excision repair
oki04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109880491 (polr2k)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109880491 (polr2k)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    109880491 (polr2k)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109880491 (polr2k)
   03400 DNA repair and recombination proteins [BR:oki03400]
    109880491 (polr2k)
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109880491 (polr2k)
  RNA polymerase III system
   RNA polymerase III
     109880491 (polr2k)
  RNA polymerase I system
   RNA polymerase I
     109880491 (polr2k)
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109880491 (polr2k)
SSDB
Motif
Pfam: DNA_RNApol_7kD A2L_zn_ribbon MCM_OB DUF5816 Cytochrome_C7 HypA DZR zinc_ribbon_13
Other DBs
NCBI-GeneID: 109880491
NCBI-ProteinID: XP_020328287
Ensembl: ENSOKIG00005018871
LinkDB
Position
LG17:complement(562922..565179)
AA seq 58 aa
MDTQKDVQPPKQQPMIYICGECHTENEIKARDPIRCRECGYRIMYKKRTKRLVVFDAR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggacactcaaaaagatgtgcaaccccccaagcaacagcctatgatctacatatgtggg
gaatgccacactgaaaatgaaattaaggctcgtgatccaatcagatgcagagagtgtgga
tacagaatcatgtacaagaagagaacaaagagattggttgtgtttgacgcgcggtga

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