Oncorhynchus kisutch (coho salmon): 109880565
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Entry
109880565 CDS
T09179
Name
(RefSeq) colorectal mutant cancer protein isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oki03037
]
109880565
Cilium and associated proteins [BR:
oki03037
]
Primary cilia and associated proteins
USH complex and associated proteins
109880565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
DUF2089
Motif
Other DBs
NCBI-GeneID:
109880565
NCBI-ProteinID:
XP_031641376
Ensembl:
ENSOKIG00005032129
UniProt:
A0A8C7MRP6
LinkDB
All DBs
Position
LG13:complement(8757648..8777028)
Genome browser
AA seq
749 aa
AA seq
DB search
MEAMEEFKRGKSDTLDIQSEGEEMTPVTLVTTMTPDTEVNSEPSQAELAQCEAEVGTLLS
IIAELNRKMGALQAPSDPDDLKPQEPVILPPAPASLSSPPPSLCNPEKHTGTASKAPVTN
REGSGEVWSELQGVMSVLEGSINTRRAWAASHTACGQDGQMEHLTAARDSWVQVTQVLEE
MEREFGISYPSGLPPEERQQYQKDILALHQRNCDLRSSLQSRQEELEGAKVTVGDIEVER
NSLHEKLLGLHKAWRSGSLSPPYSSSGSSSGVVLSPGWASPGSPGSPSFLGSPPFPGSPL
FLRRPIAMGIFPALSTGGDISSSASPSPSPWPGSVPQGSPCRSPSPSVSLEGETDRLQRC
IERLKARNERLTAALDKRKGESELISMTLSRHEADSTALQMALQYCEECEEAYSELLSVY
EGRRQQVIPHWRHIAGPVMESQQPNSPRPSLRSLRTEELSTSFSTPGGAVETETYIQTRF
HLYYTARGSEVEGCEADIRERIERLKQDRAAVCVPKPGPGGEGNLSPDTGTLAGLRGTRG
GQGGQDTSNPQSTKREKAVLLYDLVTVREEMSELRGLIRLTEKERRCLDWSLMAQKAQDA
AGALISESLAEEIEDRRTEQQRTSENEDKLSSDGDTPGPQNRAILRELQAVLQREQVLKR
RVLAVRESLDLVLSDSASRRRGNDEQMARLAQAHSKATGSYRNARRKYREKLWRLESQVS
AMSDRHMTQIGALKATLEAMECRREETVL
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatggaggagttcaaacgagggaaatctgataccctggacatacagtcagag
ggtgaggagatgaccccggttaccctggtaaccacaatgacccctgacaccgaggtgaac
tctgagccttcccaggcagagctggctcagtgtgaggcggaggtcggaactctactcagc
atcattgctgaactcaacaggaaaatgggcgcattacaagcaccaagtgatccagatgac
cttaaaccacaggagccagtcatcctccctccggctccagcctccctgtccagcccccct
ccatccctctgcaacccagagaaacacactggcaccgcatctaaagccccagtaaccaac
agagagggtagtggtgaagtatggtcagaactccagggagtcatgtctgttctggagggt
tccattaacaccaggagggcctgggctgcctctcacactgcctgtggccaggacggacag
atggaacacctcacagccgccagggacagctgggtacaagtcacacaggtcttagaggag
atggagagagagtttgggatctcgtacccgtctggtctgccccccgaggagcgtcagcaa
taccagaaggacatcctggcacttcaccagcggaactgtgacctgcgcagcagcctacaa
agcagacaggaagaactagagggggcaaaggtcacggtgggagacatagaggttgagagg
aacagtctacatgagaagttactgggcctccataaggcgtggcgatcaggcagcctctct
cctccctacagctcctcagggagctccagtggtgtggttctgagtcctggctgggcctcc
cctggttcccctggttccccttcattccttggctctcctcccttccccgggtcacccctg
ttcctcagaagacccatcgccatggggatcttcccggccctctctactgggggggacata
tcctcctcggcctctccatcaccttccccctggcctgggagtgtcccacaaggcagcccc
tgtcgtagccccagccccagcgtcagcctggagggtgagacagacagactacagaggtgt
atagaaaggctgaaggcccggaacgagcgtctgactgcagctctggacaagagaaaggga
gagtctgagctgatcagtatgacgctcagcagacacgaagctgacagcacagccctgcag
atggctctccaatactgcgaggagtgtgaggaggcctacagtgagttactgtctgtgtac
gagggcaggagacagcaggtcataccacactggagacacatagcaggcccggttatggag
agtcagcagcccaacagtcccaggccgtcccttaggagtctaagaactgaggagttgtca
acctccttctcaacaccagggggtgctgttgagacagaaacatacatccagaccaggttc
catctctattatacagccagggggtccgaggtagaggggtgcgaggcggacattcgggag
cgtatcgagcggttgaagcaggacagggcagcagtgtgtgtccctaagccagggcctggg
ggagaggggaatctcagcccagatacaggcaccctggctgggcttagagggacccgtgga
ggacaagggggccaggacacctccaacccccagagcaccaagagagagaaggctgttctg
ctctatgacctggtcactgtcagggaggagatgtcggagctgcgaggtttaatccgtctg
acggagaaggagcggaggtgtctggactggagtctaatggcccagaaggcccaggatgca
gctggagccctgatctctgagagcctcgctgaggagatagaggacaggaggacagaacag
cagaggacttctgagaacgaggataagctaagcagcgatggagacacccctgggcctcaa
aaccgtgccatccttcgagagctacaggctgtcctgcaacgggagcaggtgctgaagagg
agagtgttggcggtgagggagtctctggacttggttctctccgacagcgcctctcgcagg
agaggcaacgatgagcagatggctcggctcgcacaagctcacagcaaggccacagggtcg
taccggaacgctcgcaggaagtacagggagaagctgtggaggctggagagtcaggtgtca
gcaatgtcagatcgtcacatgacccagatcggggccctgaaggccacgctggaggccatg
gagtgcaggagggaggagactgtactctga
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