Oncorhynchus kisutch (coho salmon): 109880588
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Entry
109880588 CDS
T09179
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109880588
03036 Chromosome and associated proteins [BR:
oki03036
]
109880588
Spliceosome [BR:
oki03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109880588
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
109880588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
RRM_occluded
HAT_Syf1_M
Lsm_interact
FAT
Motif
Other DBs
NCBI-GeneID:
109880588
NCBI-ProteinID:
XP_020328373
Ensembl:
ENSOKIG00005020264
UniProt:
A0A8C7ME94
LinkDB
All DBs
Position
LG3:complement(31694499..31710840)
Genome browser
AA seq
958 aa
AA seq
DB search
MAAIGDADETQLQEMEEEAVMENEMDSDEEEGLGIENSDDETDNSSEDEKENEAEIQRLE
EQLSINAFDYNCHVDLIKLLRQEGELPRLRKARQKMSELFPLTEEIWLDWLKDEIHLTEE
EPNREKVYELFETAMKDYICPEIWLEYAQYSIGGMGLPGGMEKVRSIFERALTAVGLHMT
KGATVWEAYREFENAILATVQPPLGSVPTREQQELLNAQLERIHTLFRRQLSIPLMDMDG
TYAEYEEWSDQGVSDTVSQKYKGALQEMEKSKPYEETLMIAEPPKLAEYQTYIDYEQKEG
DPARIQIIFERALSENCLVPDMWAKYTKYLDRQLKIKDLVLSSHDRAVRNCPWTMGLWKN
YLLALERHGADHHTISDVFERALNAGFIQATDYVNIWEAYLDYLRRRVDFSKGESTLTLE
SSRELEELRAAFTRSLDYMKQDVEERFSESGDPSCTIMQVWAKIEALHCKNMQKARELWD
SIMTKGNAKFANMWLEYYNLERSYGDALHCRKALHRAVQCTSDYPEHVCEVLLTFERVEG
SLEDWDAAVQKTETRLNRVNEQRAKVTEKEAHVARQVEEKTDQRRRAKADKKNQKKGQKG
SRPGEKRKAEDKDYEDEWGEESEQPPKRHRREGDQGFRGGCGGAEEFMGTESGLFGRRAP
PGRRQETPGTKRGQQVAPATVWKTQEDDPELRKDDCSVFISNLAFTMEDPEKRLKKLFEP
CGPVQSVRPVYAAKGFRGYCYVQFEGKASVVEALKMDRQEVEGRPMFVSPCVDKNKNPDF
KVFKYNTNLEKHKIFISGLPFSCTKEQLEELCKVHGTIKDIRLVTNRSGKPKGLAYVEFG
DEAQASQAVLKLDGTVLQEHTLSVAISNPPRRNTADKPGFSRPVGAMMPRSMVYGSRGKG
RTQLSLLPRSLHRQTGSESKAENGTAPKPTGGASGDAGIEAQAKPLSNSDFAKMLFKK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaataggggacgcagatgagactcagttgcaagagatggaggaagaggcagtg
atggaaaatgaaatggattcagacgaagaggagggtttgggaattgaaaattccgacgat
gaaacagacaattcatcagaagacgaaaaagagaatgaagccgaaattcagcgtttggag
gagcagctgtccatcaatgcttttgattacaactgtcatgtggacctcataaaactcctg
aggcaggagggggagctgcctcggctgcgtaaggcaaggcagaagatgagtgagctcttc
ccactcactgaagagatttggctggactggctcaaggatgagatccacctaacagaagag
gagccgaaccgggagaaagtctatgagctctttgagacggctatgaaagattatatctgc
cctgaaatctggctggaatatgcccaatactctatcgggggcatgggactgcctggtggg
atggagaaggtgaggtccatcttcgagagagccctgacagctgtggggctgcacatgacc
aagggggcgacagtgtgggaggcctacagggagtttgagaacgccatactggcaacagtt
cagccgccccttggcagcgttcccacccgcgagcagcaggagcttctgaacgctcagctc
gagcgcatccacactctgttccgccgccagctgtccatccccttaatggacatggatgga
acatatgcagagtatgaagagtggtctgaccagggagtgtctgatacagtctcccagaag
tacaagggggccctgcaagaaatggagaagagcaagccttatgaggagactctgatgata
gccgagccacccaagctggcagagtatcagacctacattgactatgagcaaaaggagggt
gacccagcacggatccagatcatctttgagcgggcattgtcagaaaactgcctggtacca
gacatgtgggcaaagtacaccaaatacctggaccgccaactgaagatcaaagacctggtc
ctgtcctctcacgaccgtgcggtcaggaactgcccctggaccatgggcctgtggaagaac
tacctgctggccctggagaggcatggggctgaccaccacactatctcagatgtttttgaa
agggccctgaatgctggtttcatacaagccacagattacgtgaatatctgggaagcatac
cttgattacctgaggcggcgcgtcgatttcagtaaaggtgaaagcaccttaacattggag
tcgagcagggagctggaggagctgcgggcagccttcacccggtccctggactatatgaaa
caggatgtggaagagaggtttagtgaaagtggagacccctcttgtactatcatgcaggtc
tgggcaaagatagaggccttgcattgtaagaacatgcagaaggccagagaactgtgggac
agcatcatgaccaaagggaacgccaaattcgccaacatgtggttggagtactataacctg
gagaggtcgtacggagatgctctccactgcaggaaagccctccacagggccgtccagtgt
acctccgactacccagagcatgtgtgcgaggtcctgctcacctttgagagggttgagggt
tctctggaggactgggatgcagcggtgcagaagactgagacacggctgaacagagtcaat
gagcagagggccaaggtgacagagaaagaggcccatgtggctcgacaggtggaggagaag
actgatcagcggcggagggccaaggcagacaagaagaaccagaagaagggccagaaaggc
agcaggcctggagagaagcggaaggcagaggacaaggattacgaggatgagtggggagag
gaatcggagcaacctccaaagaggcaccgaagagagggcgaccaaggcttcaggggggga
tgtggtggtgctgaggagttcatggggacagagagtgggctgtttgggaggagagccccc
cctggccgcagacaggaaacccctggtactaagaggggccagcaggtggcgccagccacc
gtatggaagacccaggaagacgaccccgagctacgcaaggacgactgcagtgtgtttatc
agtaacctggccttcaccatggaggatccagagaagaggctgaagaagttgtttgagccc
tgtggtcctgtccagtcagtgcgccccgtctatgctgccaagggcttcagagggtactgc
tacgtacagtttgagggcaaggcgtctgtggtcgaggccctgaagatggaccggcaagag
gtggaaggcagacccatgttcgtatcaccctgtgtggataaaaacaagaaccctgatttt
aaggtgtttaagtacaacacaaacttagagaaacacaagatctttatctcgggcctgccc
ttttcctgcaccaaggagcagctagaggagctgtgcaaggttcatggcaccattaaagac
atccgcttggtcaccaaccgctcaggcaaacccaagggtctggcgtacgtggagtttggg
gatgaggctcaggcctcccaggccgtgctgaagttggatggcacagtactacaggaacac
acactctctgttgccattagcaacccgcctcgcagaaacactgccgacaagcctggcttc
agcagacctgtgggagccatgatgccccggtctatggtctatggatcgaggggaaaaggg
cgcacccagctctcattactccctcgttcactacatcggcagactggatcagaaagtaaa
gcagagaatgggactgcacctaaacccacagggggcgcatctggagatgctgggattgaa
gcacaagccaagcccttgtctaattcagactttgctaaaatgcttttcaaaaagtga
DBGET
integrated database retrieval system
