Oncorhynchus kisutch (coho salmon): 109880635
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Entry
109880635 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
oki04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109880635
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109880635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109880635
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
109880635
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109880635
Multi subunit type E3
ERAD complex
109880635
LMBR1L-GP78-UBAC2 complex
109880635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_16
zf-ANAPC11
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf_RING_Vps8
RING_XB3-XBAT31
FANCL_C
Motif
Other DBs
NCBI-GeneID:
109880635
NCBI-ProteinID:
XP_031687111
Ensembl:
ENSOKIG00005031633
LinkDB
All DBs
Position
LG8:complement(77096840..77108729)
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AA seq
632 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTEQGFGVPDMDEPPPPAPLGDNRG
GLGLEHVTSDDVVGADTELATTVMWYLVTDSLFVWVLVNTACCSLMLIAKMIQCMVFGPL
RVSEKQHLKDKFWNFIFYKFIFIFGVLNVQMVEEVVMWCLWFSALVFLHLMVQLCKDRFE
YLSFSPTTSMNSHVRVLTLLVSLLLGCCGLAVVCGLLGAAHGMHTLSFMAAECLLVTVRT
GHVIMRYTIHLWDLNHPGTWESKGSYVYYTDFIMELSMLFLDLMHHIHMLLFGNIWLSMA
SLVIFMQLRYLFHEVQRRIRRHKNYLRVINNMEARFAVATAEELVANSDDCAICWDTMQT
ARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNISGDGGPARGQQQGAGLPLDNNLGPGG
PAADTRPHLNQHNHFFHFDGSRIASWLPSFSVEVMHTTNILAIAQQANNSQLNTMAHQIQ
EMFPQVPYHLVLQDLQLTRSVEVTTDNILEGRIVVPFPALAAERSPVQVNPGPEGAGASG
GVDTAPRELNSLEVRGSRFSKSAEERQKMLLQRKDELLQQARRRYLRKSPEDEEDLPTLE
EDAPVSDVTMLRRRTMAAAAERRMQSQPDPAP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgttcctggagaggtttccctggcccagtctgcagacctacacagcgctg
agtgtggctctgctggctggaagcatcttcagcgcctacactactgtgacagaacagggg
ttcggggttccagacatggacgagcctccaccacctgcacccttaggggataatagaggc
ggcctaggcctagaacatgtgactagcgatgatgttgtgggtgcagatacagaattggcg
accactgttatgtggtaccttgtcaccgacagtctctttgtatgggtgttggtgaataca
gcttgctgttctctgatgttaattgctaagatgatccagtgcatggtttttgggcccctt
cgagtcagtgagaagcagcaccttaaggacaagttctggaacttcatcttctataagttc
atctttatcttcggggtgctgaacgttcagatggtggaggaggtggtcatgtggtgtctg
tggttctctgccctggtcttcctccacctcatggtccagctgtgcaaggaccgctttgaa
tatctgtccttctcccccactacttcaatgaacagccatgtgcgtgtccttaccctactg
gtgtccctgctgctgggctgctgtggtctggctgtggtctgtggtctgctgggcgctgcc
catggcatgcacaccctctccttcatggctgccgagtgcctgctggttactgtgcggact
ggacatgtcatcatgaggtacaccattcacctgtgggatctgaaccacccaggcacttgg
gagagtaaaggttcctacgtttactacactgacttcatcatggagctgtctatgctgttc
ctggaccttatgcaccacattcacatgctgctctttggtaatatctggctgtccatggcc
agtctggtgatcttcatgcagctgaggtatctgttccatgaggtgcagcgccgcatccga
cgccacaagaactacctccgtgtcatcaacaacatggaggccaggttcgcagtggccaca
gccgaggagctggtagccaacagcgatgactgtgccatctgctgggacaccatgcagaca
gcacgtaaactgccctgcggacacctcttccacaattcctgcctgcggtcgtggctggag
caggacacgtcgtgtccaacatgtaggatgtccctgaacatcagtggtgatggaggtccg
gccagaggccagcagcagggggctggcctcccactggacaacaacctgggccctgggggc
cccgctgcagataccagaccacacctcaaccaacacaatcacttcttccactttgatggc
tcccgcatcgccagctggctgcctagtttctcagtagaggtgatgcacacaactaacatc
ctggctatcgctcagcaggccaacaactctcagctcaacaccatggcccatcagatccag
gagatgtttcctcaggttccctaccacttggtgctgcaggacctgcagttgacccgctct
gtggaggtcaccaccgacaacatcctggagggacgaatcgtggtgcccttccctgctctg
gcggctgagcgttcccccgtgcaggtgaacccaggcccagagggggcaggagccagtggg
ggggtggatactgctcccagagagctgaacagcctggaggtcagagggagccgtttctcc
aagtctgcagaggagagacagaagatgctgctacagaggaaggatgagctgctgcaacag
gcacgcaggagatacttgagaaagagcccagaggacgaggaggacctgcccactctggag
gaagacgcccctgtctcagacgtgaccatgctgagacgcaggaccatggcagcagctgca
gagagacgcatgcagagccaaccagaccctgctccctga
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