Oncorhynchus kisutch (coho salmon): 109880696
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Entry
109880696 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109880696
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109880696
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109880696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
109880696
NCBI-ProteinID:
XP_020328471
Ensembl:
ENSOKIG00005021922
UniProt:
A0A8C7H6Q7
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All DBs
Position
LG19:complement(37170821..37178635)
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AA seq
626 aa
AA seq
DB search
MDPPRTRSRSGFFHYGMNGGGNGNNTINNGNMMNASGGIGVNYPQQNNPGWVPHGVRGSY
SENQHTQGNYLSGGAQRHPSHGAHRHPGTGVLHYHPDNICSDERDKMEDSPSPKRQRLSQ
QSMLDLSSAPPSTPSSPIRPWELPHTPTTWATPPPSRRPHPHYLPERCHTPVRNRRSPPM
RRQRGRRDRLTSHPHHNSHPQQQQQHHHHHYHHHHHNPHHHHSHPHHGLSAGPQDENYRH
PVPPQSYPYNQQPPRGPEERPYHPPNLSPRPLHHPPNLSPRLMHPAAHPQHPPQQQSSVV
LDLHDQGSSQVSYPVSPPGAPPGLSPRSAPPQLPACSVVFSGQHYPVCSVPPSVLQTCSV
QHLPMPYPFPSLLSSDPTFLLPPPHLSHHPPHLPHHPPHLPQPGQFGPYPTQQARSPLQR
IENDVELLGEHLSLGAGLHYPPAGHPGLPPHSTQLHFLSHDPLPQEFFGVSYPSFMPRRI
PGRRYRSQQPLPPSPYHPSFLPYFLSMLPVQPTGPAISLELDVDDGEVENYEALLNLAER
LGEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVVCMSDFESRQLLRVLPCSHEFHGKC
VDKWLRANRTCPICRADASEVQRDSE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggatccgccgaggactcggtcacgttcaggtttctttcattatggcatgaacggtggt
ggcaacggcaataacacaatcaacaatgggaacatgatgaatgccagcggagggatcggg
gtgaattaccctcaacagaacaaccccggctgggttccgcacggagtgcgcggtagctat
tcggagaaccagcacacccaggggaactacctgtccggtggggcgcaacgccacccttcc
cacggagcacacagacaccccggcaccggtgtcctgcactaccaccctgataacatctgc
agtgatgagcgggacaagatggaggacagtcctagcccaaagcgacagcgtctttcccag
cagtctatgttagatctgagctctgcccctccctccaccccatcctctcccattcgtccc
tgggagctaccccacacccccactacctgggccacacccccacccagtcgcaggccacac
ccccactacctgccagagcgatgccacactcctgttcgcaaccgccgcagtcctccaatg
agacgccagcgtggccgccgtgaccgtctcacctcccaccctcatcacaactctcacccc
caacaacaacaacaacatcatcatcaccactaccaccaccatcaccacaacccgcaccat
catcattctcaccctcaccacggcctctcagcagggcctcaggatgagaactaccgccac
cccgtcccccctcagagttacccctacaatcagcaacccccccgggggccagaggagcgc
ccctaccacccccccaacctatccccacgccccctccaccaccctcctaacctgtccccc
aggctgatgcaccctgccgcccacccccagcacccccctcagcagcagagcagtgtggtg
ctggaccttcatgaccagggttcttctcaggtgtcgtacccggtctctccccctggcgca
ccccccggcctgtctccccgctctgcccccccgcagctcccagcatgctcggtggtcttc
agtggacaacactaccctgtctgcagtgttcctccatcggttctgcagacatgctctgtg
cagcacctgcccatgccctacccattcccctccctgctgtccagtgaccccacctttctc
ctgccccctccccacctgtcccaccatccccctcacctcccccaccatccccctcacctc
ccccagccaggacagtttggaccctaccccacacagcaggccagatcgccattacagagg
atagagaatgacgtggagctgttgggggaacacttgtccttaggggccggtctccactac
ccccccgcaggccaccccggcctgcccccccactccacacagctccacttcctttcccat
gatccactgccacaggagttctttggagtgtcgtatcccagcttcatgccacgacgtatc
ccaggacgacgctaccgctcccagcagccactgccaccctcgccttaccaccccagtttc
ctgccttacttcctctccatgctgccagtccagccaacaggccctgccatcagcctggag
ctggacgtagatgacggagaggtggagaactatgaggcccttctcaacctggctgagcgt
cttggagaggccaaactcagaggactgaccaagggagacattgaacagctgccttcctat
aggttcaaccccaacaaccaccaatcagaacagacgctgtgtgtggtgtgtatgagtgac
tttgagtctcgtcagctgctgcgggttctaccctgcagtcacgagttccatgggaagtgt
gtggacaagtggctcagggctaacaggacgtgtcccatctgtagggctgatgcctccgag
gtccagcgagactcggagtga
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