Oncorhynchus kisutch (coho salmon): 109880728
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Entry
109880728 CDS
T09179
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM-like isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oki04121
]
109880728
Enzymes [BR:
oki01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109880728
Ubiquitin system [BR:
oki04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109880728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
Gp5_trimer_C
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
109880728
NCBI-ProteinID:
XP_031645322
Ensembl:
ENSOKIG00005009475
LinkDB
All DBs
Position
LG15:complement(1347072..1355760)
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AA seq
808 aa
AA seq
DB search
MEGSDSSEPGASDQPEAQRRRQRDRLDREEAFYQFVNNLSEADYRLMRDNNLLGTPGEIT
AEELLSRLQQIKDGPEQQQPSINTSETGEATGELAEGPEDPSNGDTLLDWLNTVRRTGNT
TRSGHRGNQSWRAVSRTNPNSGDFRFSLEINVNRNLAEQQARAEGEAEAQEEAPTRAPGN
GVEVQPEAGTEVPMETGEVLEEPVVEEMAVIVEPEAEMEPEAEVEAEPEAEVEAEPEAEV
EAEPAAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEPEAEVEAEP
EAEVEAEPEAEVEAEPEAEVEAVVEAEPEAEVEAEPEAEVEAEMVPELVVEVVPQPPSPV
TPTPPVSRPASPLVQAPPAAPAPPSPPPEEPPRRGQRRARSRSPEQRRTRARTTRSRSPL
TLDRLPRHVPTSATSHSPATQAPAEGSSRTRQHVLSRQSTTEYEAQSAGTGSDTGSGNAP
EPGTTPPQEGEAAGGEGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIANRTRSRSQNSNNT
FLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQTMIRQIMTGF
GELSYFMDSDSDSSDSNRGGGNPTGAADLAEALNTPEGGVAGMAEGAEPPVSVSGHSIGG
VGEARTEEREGEDGMGLGLSPGIGLGVGGTPREGRARPRAPISLEEPGSLPFLRLAHFFL
LNDEDEEQPRGLTKEQIDNLSTRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHC
IDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgacagttccgagccgggcgccagtgaccaaccagaggctcagcgcagg
cggcaacgggaccggctagaccgggaggaggccttctaccagtttgtcaacaacctgagt
gaggcagactaccggctgatgagagacaacaacctgctgggtaccccaggtgagatcaca
gcagaggagttgttgagtcggctgcagcagattaaggatggaccagagcagcagcagcct
agcatcaacaccagtgagactggagaagctacaggagaactggcagaaggtccagaggac
ccgtctaacggcgacaccctcttggattggctgaacaccgtcaggcggacaggcaacacc
acccgcagtggtcaccgaggcaaccagtcatggcgggcggtgagccggaccaacccaaac
agcggagacttccggttcagtctggagatcaacgttaaccgtaacctggctgagcagcag
gcccgcgcggagggggaggccgaggcgcaggaggaggccccaactagagcacctggcaat
ggggtggaggtccagcctgaggcggggacggaggtgcccatggagacaggagaggtgctg
gaggaaccagttgtggaggagatggctgtcatagtggaaccagaagcggagatggagcca
gaggctgaagtagaagctgagccagaggctgaagtagaggctgagccagaggctgaagta
gaagctgagccagcggctgaagtagaagctgagccagaggctgaagtagaagctgagcca
gaggctgaagtagaagctgagccagaggctgaagtagaagctgagccagaggctgaagta
gaagctgagccagaggctgaagtagaagctgagccagaggctgaagtagaagctgagcca
gaggctgaagtagaagctgagccagaggctgaagtagaagctgagccagaggctgaagta
gaagctgtagtagaagctgagccagaggctgaagtagaagctgagccagaggctgaagta
gaagcagagatggtcccagagttagtagtagaggtagtcccacagccgcccagccctgtc
acccccacccctcctgtctccagaccagccagtcccctggtgcaggcccctccagccgcc
cctgcccctcctagcccgccccctgaggagcctccgcgacggggccagagacgagcccgc
agccgtagccctgagcagcgccggaccagggctcgcaccacacgaagtcgttcccccctc
accctggaccgactcccccgccacgtccccacctcagccacctcacacagccccgccacc
caggcacccgcagagggaagctcacggactcgacagcatgttctgtcccggcaaagcacc
acagagtacgaggcccagtcagccggaacagggtctgacacaggttctgggaacgcccca
gagcccggtaccaccccaccccaggagggagaggccgcgggcggggagggagcagcaggg
cgacgtccccccaccatcatgctggacctgcaggtgcgtcgtgttcgtccaggtgagtac
cgccagagggacagcattgctaacagaacccgctcacgctcccagaactccaacaacacc
ttcctgtacgagagtgagaggggggggttccgcaggaccttctcccggtccgagcgtgcg
ggtgtgaggacgtacgtcagcaccatcaggatccccatcaggaggatcagtgatgcaggg
ttgggagaggccacctccatggctctgcagaccatgatacgacagatcatgaccggcttc
ggagagctcagctacttcatggactcagactctgactcctcggactcaaaccgtggcggt
ggtaaccccactggcgctgccgacctggccgaggcgctcaatactcccgaagggggagta
gccggcatggcggagggggcggagcctcctgtctcagtgagcgggcatagtattggagga
gtcggggaggcaaggacagaggagagggagggggaggacgggatgggtctaggtctgtcc
cccgggataggtttaggggtggggggcacccccagggagggtcgagctcggccccgtgcc
cccatcagtctggaggaaccagggtcactacccttcctccgccttgctcacttcttcctc
ctgaatgatgaggatgaggaacagcccagaggactcaccaaggagcagatcgacaacctc
tccaccaggaactttggggagagtgatgctctgaagacctgcagtgtgtgtatcacagag
tatgctgaggggaacaagttgaggaagttgccctgttctcatgagtaccatgttcactgt
atcgaccgctggctgtctgagaactccacctgtcctatctgccgcagggccgtgttggtg
tctgctaaccgggagagtgtggtctaa
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integrated database retrieval system
