Oncorhynchus kisutch (coho salmon): 109880856
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Entry
109880856 CDS
T09179
Name
(RefSeq) exosome complex component CSL4-like isoform X2
KO
K07573
exosome complex component CSL4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109880856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109880856
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109880856
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109880856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
SPK
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
109880856
NCBI-ProteinID:
XP_020328625
Ensembl:
ENSOKIG00005029494
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDRLCSTEDCMPGTGVYLRHGYIYSSLAGYVLRKNEGEELPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDRVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgataggctatgcagcacagaagactgtatg
cccggtactggggtgtacctacgacacggctacatatactcctcgctagcaggctacgta
ctcaggaagaacgaaggagaggagctaccagtcatctcggtggtgagagaaaccgaggct
cagctactaccagatgtaggagccatagtgacctgtaaggtgaccagtatcaaccccagg
tttgccaaggtccacatcctctacgttggttccacaccactgaaggaccgttttagagga
accatcaggaaagaagatgtacgagcaacagaaaaagacagggtggagacatataaaagc
ttccgtcctggagacatcgtcctggctaaagtcatctccctgggagacgtccagtccaac
tacctgttgaccacagcagagaacgagctgggggtggtggtagcccacagtgaagcagga
gcccagatggtgcctatcagctggtgtgagatgcagtgcccacggacgcacgccaaagag
ttccgcaaggtggccagggtgcaacctgagtatctgcaggcctga
DBGET
integrated database retrieval system
