Oncorhynchus kisutch (coho salmon): 109880903
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Entry
109880903 CDS
T09179
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oki02000
]
109880903
03037 Cilium and associated proteins [BR:
oki03037
]
109880903
Transporters [BR:
oki02000
]
Other transporters
Pores ion channels [TC:
1
]
109880903
Cilium and associated proteins [BR:
oki03037
]
Other cilia and associated proteins
Stereociliary proteins
109880903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
COLEC12
Motif
Other DBs
NCBI-GeneID:
109880903
NCBI-ProteinID:
XP_031687663
LinkDB
All DBs
Position
LG1:complement(71480211..71512003)
Genome browser
AA seq
1018 aa
AA seq
DB search
MSHYNNTGGYNNPAYHDSDTLEIDRSPSRKSQSHHSNPHGNPYPRDDGAGGERGRSDLQQ
LPGGVQSSYDEAQERVPWGGWQEGSWRGRDSIPMGLLPPRSESPRWQQHDLNHSGYQIEQ
ATHYDTTPPVRLPSATSGHVSMRFRGSRKMSLFPVGEAALGNLGLSEDDIRNEMENEEHN
LVQELVAMSTRDRIKAIRDLPMSFDDKKHIRGQVLALKSFKKSRHLNCFADCSKTVSLAF
RRCGANMTLAKQTLELWRGTMKEVGGKFGTGVLSYFKFLKWLLMFNIFSFLVNFGFITIP
QLIYHPTPDIPAGVSFKGLEILTGAGYFSHTVMYYGGYSNKTQGTGGRSEYNMQLAYFFT
VAAYMVLCGAALIYSMASSFRKKYVLADSGLGGAWQLLCSWDFSVTNEKAVRQRKNNLRI
QLKESLSEKVQVALLPLTERLKHYGVFLGTWLLSTGMALGCGASVYFLCQYDTWRTRQSA
DKVSGSLLEEAATLLLPFVVSLINLVVPLFYSLFKKIEHYSNPRMQVYAIIVRNVILKMS
ILGILCYYWMKDVANTFSCWESIVGQALYRLVIMDFLFIMLGSFFGEFLSNVIGTKCIQS
LGVPEFDVARNVLDLIYAQTLAWIGIYFSPLLPVIQIIKFFILFYLKKVSLTQNCQPPRR
AGRAAQMQTIFIAILFFPSFVGALSMVAYTVWTLPPSDKCGPFRGLNTTFSAIQIWMDDL
NRVDAFQWTVWIYQHVIRSEIFYFLVSLIILVFIYIFRQITQGRQLLIILLRQQIVNEGK
DKAFLLEKLQNLQKSKQNKRKKKKQVRKRQENESSSGMLQALIARQRLEQENGDSSSSFG
VPMPSGHSVSTTSSAMMQAMLARQYAEDQDVASYRGVPFPADQTSAPSSALIQAMQARQR
AESQNEDEFYRAPVQSQNPVNALPSAMIQVMQARQRAESEQEEDQFYRVPVHSEHPVSST
PSAMMQVMQARQRAEEEESEFYRAPASSQHPDASGTGSALIQAMLARQQVEEEYGDRY
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtcacactacaacaacactggaggatataacaaccctgcctatcatgacagtgacacc
ctggagatagataggagtccttctaggaaatcccaatcccatcacagtaacccccatggt
aacccctaccccagggatgatggagctgggggtgagaggggcaggtctgatcttcagcag
ctcccaggaggggtccagtccagctacgacgaagcccaggagagagtgccctggggcggg
tggcaggaggggagctggaggggcagagacagcattcccatgggtctccttcctccccgg
tcggagagcccacgatggcagcagcatgacctcaatcacagcgggtaccagatcgagcag
gcaacacattatgacacaacgcctcctgtacgacttccatctgcaacttcaggtcatgtt
tcgatgaggttcagggggtcgaggaagatgagtctattccctgtaggagaggctgctctg
ggcaatctgggcctttctgaggacgacatcaggaatgagatggaaaatgaggaacataac
ttggtccaagagctggttgctatgtcaacaagggacagaatcaaggccatccgagacctc
cctatgagctttgatgacaagaaacacatcaggggccaagtgttggcgttgaaatcattc
aaaaagtcccggcatctgaactgctttgcagactgctcaaagacggtctcactggcgttc
cgcaggtgcggtgctaacatgactttagccaagcagaccctggaactgtggcggggtacc
atgaaggaggtcgggggtaaatttggcacgggggtcctctcctacttcaagttcctaaaa
tggctgctgatgttcaacatcttctccttcctggtcaactttggtttcatcaccatcccc
cagctcatctatcaccccacgccagacatccccgctggggtcagcttcaaagggctagag
atactgactggagcgggttatttcagccacacagtgatgtattatggcggctacagtaat
aaaacacaagggacagggggccggtctgagtacaacatgcagctggcctacttcttcacc
gtagcagcctacatggtgttgtgtggagccgccctcatctacagcatggccagctcgttc
aggaagaagtatgtccttgcagactcaggcttgggtggagcctggcagctcctgtgtagc
tgggacttcagtgtgactaacgagaaagccgtacgacagcgcaagaacaatctgcgcatc
caactcaaggagtccttatcagaaaaggtccaggtggccctgctacctctgacagagagg
ctgaagcactatggggtcttcctgggcacctggctcctctccacgggcatggccttgggc
tgtggcgccagtgtctacttcctgtgtcaatatgatacatggcggacgaggcagtcagcg
gacaaagtttccggctctctcctggaggaggccgctactctcctcctcccctttgtggtg
tccctgatcaatctggtcgtccctctcttctactctctgttcaaaaagatagagcactac
tccaaccctcgcatgcaggtctatgccatcatagtcagaaacgtcattctcaagatgtcc
attctgggtattctatgctactactggatgaaggatgtggccaatacattttcatgctgg
gagtccatcgtaggacaagccttgtacagactggttattatggacttcctcttcataatg
ttaggatccttctttggagagttcctgagcaatgtcattgggactaaatgcatacagagc
ctgggagttccagagtttgacgttgccaggaatgtccttgacctgatctatgcacagacc
ctggcatggatcggaatctacttctctcccctcctcccagtgatacagataatcaagttc
ttcatcctcttctacctaaagaaggttagcctgacccagaactgccagccccccaggcga
gccggcagggcggctcagatgcaaaccatcttcatcgctatcctcttcttcccttccttc
gtgggggctctgtccatggtggcctacaccgtgtggactctgcccccctcagacaagtgt
gggcccttcaggggcctcaacaccaccttcagtgcaatacagatctggatggacgatttg
aacagggtggatgcatttcagtggactgtctggatctaccagcacgtcatcaggagtgag
atattctacttcctggtctctctcatcatccttgtcttcatttacatcttcaggcagatc
actcagggacgccagctgcttatcattctactgagacagcagattgttaatgaagggaag
gacaaggcgttcttgttggagaagctacagaaccttcagaaatccaagcagaacaaacgg
aaaaagaaaaaacaggtcaggaaaagacaggaaaatgaatcctcctctggcatgctccag
gctctgattgcccgacagcggttggagcaagagaatggtgacagcagcagctctttcggt
gtgcctatgccttccggccactcagtctccacgacatcgagtgctatgatgcaggccatg
ctagccaggcaatacgcagaggaccaggatgtagccagttatcgcggggtgccatttcct
gcagaccaaacatctgcgccctccagtgcactgatacaggccatgcaagccaggcaaagg
gcggagtcacagaatgaggacgagttttaccgggcgccagttcagtcacagaacccagta
aacgcgttacccagtgcgatgatacaggtgatgcaagccaggcagagggcggagtcagag
caggaagaggaccagttttaccgggtgccagttcattcagaacacccagtgtcatcaacg
cccagtgcgatgatgcaggtcatgcaggccaggcagagagcagaggaggaggagagcgag
ttttaccgggcgcctgcttcttcacagcacccagatgcgtcaggcaccggtagtgctctg
atacaggccatgctagcccgacaacaggtagaggaggagtacggtgacagatactga
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