Oncorhynchus kisutch (coho salmon): 109880971
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Entry
109880971 CDS
T09179
Name
(RefSeq) calpain-3-like isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109880971
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oki01002
]
109880971
Enzymes [BR:
oki01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
109880971
Peptidases and inhibitors [BR:
oki01002
]
Cysteine peptidases
Family C2: calpain family
109880971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_7
CAPN13-like_C_EFh
EF-hand_1
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
109880971
NCBI-ProteinID:
XP_031685240
Ensembl:
ENSOKIG00005002415
LinkDB
All DBs
Position
LG7:55202006..55241074
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AA seq
734 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPLRFSGQDFTALKQECLTKKCLFEDDTFPASV
ESLGYKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNSQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SMMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKQSQHKEPKVRLVRLRNPWGQVE
WNGPWSDNSKEWVSLSKGEKDKLQHQSAEDGEFWMAFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEVACSFVIAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFNSSKARCKSYINLREVT
QRFRLSPGEYVIIPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPANAGEES
EEDQQFLSLFQQIAGDVSTGSTGRPVRPVSAWGSEMEITANELKNVLNSIVSKHKDLNTE
GFSLECCRSMISLMDVSSMDGTGRLNLQEFRHLWNKIKQWQGIFQHYNSDQASSINSYEM
RNAVNDAGFRLNNQLYDIITMRYANESMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGTI
RLSVLEWLQLTMYA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccgtccggcttcttctgtgaccggctgatccgggagagagagagaaga
gatggagaaggatccctcagcaagcccctgcgcttcagcggacaggactttaccgcactc
aaacaagagtgcctcaccaagaagtgcctgtttgaggatgacaccttcccagcctccgtg
gagtctctggggtacaaggagctgggacacaagtccaacaaggtcaagaacatcgtctgg
aagagacccaaggagatctgtgagaaccctcagttcattgtgggcggagccagcaggaca
gacatttgccagggagatcttggtgactgctggctgctggctgctatagcctgtctgact
ctgaatgagaagcttctctaccgggtcgttcctcaggaacagagcttctctgagggatat
ggaggaatcttccacttccagttctggcgctatggcgactgggttgacgttgttattgac
gaccgcatccccaccttcaacagccagctggtgttcaccaagtctgcagagagaaatgaa
ttctggagtgccctgctggagaaggcctacgccaagcttcacggttcctacgaggccctg
aagggcggtaacaccacggaggccatggaagacttcaccgggggcgtgacagagttctat
gagatgaaggaggcgcccaaggagttgtacaagatcatgaagaaggccctggagagaggc
tctatgatgggctgctctatcgactccctggttcctgctcgttttgagacccgcactgtg
actggccttgtgaagggccacgcctactctgtgactgccgttgaggagtgtaagcagtcc
cagcacaaggagcctaaggtgcgtctggtgcgcctcaggaacccctggggacaggtggag
tggaatgggccctggagtgacaactctaaggagtgggtgtctctgtctaagggagagaag
gacaagctccagcatcaaagtgctgaggatggggagttctggatggcctttgaggacttc
aagaagaactacactaagattgagatctgcaacctgacccctgatgccctggaggatgat
aagatccacaagtggacggtgtctgtgaacgagggtcgctgggtcagaggctgctccgcc
ggaggctgtagaaactacccagatactttctggaccaaccctcagtaccgcctgcgtctc
ttggaggaggatgatgacccagaagacaacgaggtggcgtgttccttcgtgatcgctctg
atgcagaagaacagacggaaagagaggaagatgggagccaatctcttcaccatcggattt
gccatctacgaggtgccgaaggagatgcacggaaacaagcagcacatgcagaaggacttc
ttcctgttcaactcatccaaggctcgctgcaagtcctacatcaacctgagggaggtgacc
cagcgcttccgtctgagccccggggagtatgtgatcatcccgtctacctacgagcctcac
caggagggagagttcatcctcagagtcttctccgaaaagaggaacacctcagaggagata
gagaacaggatcgaggctgatcatccagtgccggccccagccaatgcgggggaggagagt
gaggaggaccagcagttcctgagcctctttcagcagatagccggggatgtgagtacgggg
agtacagggaggccagtgaggccagtgagcgcttgggggagtgaaatggaaataaccgcc
aatgagctgaagaatgtcctcaacagcatcgtctccaaacataaggacctgaacacagag
ggttttagcctggagtgctgcaggagcatgatctctctcatggacgtatcctctatggac
gggacgggcagactcaacctgcaggagttcagacatctctggaacaagatcaaacagtgg
cagggaattttccaacactataactcggaccaggctagtagcatcaacagctacgaaatg
agaaatgctgtcaacgatgcaggcttccgtctcaacaaccagctctatgacatcatcacc
atgcgttacgccaacgagagcatgaacatcgactttgacagcttcatcagctgtctggtc
cggctcgaagccatgttcagggcgttccaggccttcgaccaggatggagacggtacgatc
agactcagtgtcttggagtggctccagctgaccatgtatgcctag
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