KEGG   Oncorhynchus kisutch (coho salmon): 109881019
Entry
109881019         CDS       T09179                                 
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03022  Basal transcription factors
oki03420  Nucleotide excision repair
oki04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109881019 (cdk7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109881019 (cdk7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    109881019 (cdk7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:oki01001]
    109881019 (cdk7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oki03021]
    109881019 (cdk7)
   03019 Messenger RNA biogenesis [BR:oki03019]
    109881019 (cdk7)
   03400 DNA repair and recombination proteins [BR:oki03400]
    109881019 (cdk7)
Enzymes [BR:oki01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     109881019 (cdk7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     109881019 (cdk7)
Protein kinases [BR:oki01001]
 Serine/threonine kinases: CMGC group
  CDK family
   109881019 (cdk7)
Transcription machinery [BR:oki03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     109881019 (cdk7)
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     109881019 (cdk7)
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     109881019 (cdk7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Seadorna_VP7 ABC1 Kinase-like Haspin_kinase APH
Other DBs
NCBI-GeneID: 109881019
NCBI-ProteinID: XP_020328787
Ensembl: ENSOKIG00005003846
UniProt: A0A8C7CTI2
LinkDB
Position
LG3:32717275..32723705
AA seq 345 aa
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTNDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAFIVM
TLQGLEYMHHHWVLHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRLPFLAGDSDLDQLSKIFEALGTPTDDTWPGM
SSLPDYVSFKLFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRLTATQALKMRYFSNRPG
PTPGHQLPRPNSSAEALKEKENLTIGIKRKRDGLETSTIKKKLIL
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggcgcttgatgtgaagtcccgagcaaaaagatatgaaaaactagattttctgggagag
ggtcagtttgccactgtttacaaagccagggacaagaccaacgacacaatagttgccatc
aagaagatcaaagttggacacagaacagaggctaaagatggcatcaacagaacagcccta
cgagagattaaactactgcaggagttaagtcacccaaacattattgggctgcttgatgca
tttgggcacaaatctaacatcagcttggtgtttgactacatggagacagatctggaggtg
atcatcaaagataccagtctggttttgactccagccaacatcaaagccttcatagtgatg
actctacagggcctggagtacatgcaccaccactgggttctgcacagggatctgaagccc
aataacctgctgctggatgagaatggtgtgttgaagctggctgattttggtttagctaaa
gccttcggcagccctaacagagtctacactcaccaggtagtcaccaggtggtatcgttct
ccagagttgttgttcggtgccaggatgtatggggtgggcgtcgacatgtgggctgtgggc
tgcatccttgcagagctcctcttaaggttacccttcctagctggagactcagatctggac
cagctgagtaagatctttgaagctctggggactcctacagatgacacctggcctgggatg
agtagtctacctgactatgtgtcatttaagttgtttcctggtactcctctggaacacatc
ttcagtgctgcaggagacgacctcttagagctactacagggtctattcaccttcaaccct
tccacacgccttacagctacacaggctctaaagatgaggtacttcagtaacagaccaggt
ccgacccccgggcaccagctgccccggcccaactcatcagcagaggctctcaaagagaag
gagaacctcaccatcggaatcaagaggaaacgagacggactggagacgagcaccataaag
aagaaactgatactgtga

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