Oncorhynchus kisutch (coho salmon): 109881019
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Entry
109881019 CDS
T09179
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03022
Basal transcription factors
oki03420
Nucleotide excision repair
oki04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109881019 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
109881019 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109881019 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oki01001
]
109881019 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oki03021
]
109881019 (cdk7)
03019 Messenger RNA biogenesis [BR:
oki03019
]
109881019 (cdk7)
03400 DNA repair and recombination proteins [BR:
oki03400
]
109881019 (cdk7)
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
109881019 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
109881019 (cdk7)
Protein kinases [BR:
oki01001
]
Serine/threonine kinases: CMGC group
CDK family
109881019 (cdk7)
Transcription machinery [BR:
oki03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109881019 (cdk7)
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
109881019 (cdk7)
DNA repair and recombination proteins [BR:
oki03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109881019 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
109881019
NCBI-ProteinID:
XP_020328787
Ensembl:
ENSOKIG00005003846
UniProt:
A0A8C7CTI2
LinkDB
All DBs
Position
LG3:32717275..32723705
Genome browser
AA seq
345 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTNDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAFIVM
TLQGLEYMHHHWVLHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRLPFLAGDSDLDQLSKIFEALGTPTDDTWPGM
SSLPDYVSFKLFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRLTATQALKMRYFSNRPG
PTPGHQLPRPNSSAEALKEKENLTIGIKRKRDGLETSTIKKKLIL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtgaagtcccgagcaaaaagatatgaaaaactagattttctgggagag
ggtcagtttgccactgtttacaaagccagggacaagaccaacgacacaatagttgccatc
aagaagatcaaagttggacacagaacagaggctaaagatggcatcaacagaacagcccta
cgagagattaaactactgcaggagttaagtcacccaaacattattgggctgcttgatgca
tttgggcacaaatctaacatcagcttggtgtttgactacatggagacagatctggaggtg
atcatcaaagataccagtctggttttgactccagccaacatcaaagccttcatagtgatg
actctacagggcctggagtacatgcaccaccactgggttctgcacagggatctgaagccc
aataacctgctgctggatgagaatggtgtgttgaagctggctgattttggtttagctaaa
gccttcggcagccctaacagagtctacactcaccaggtagtcaccaggtggtatcgttct
ccagagttgttgttcggtgccaggatgtatggggtgggcgtcgacatgtgggctgtgggc
tgcatccttgcagagctcctcttaaggttacccttcctagctggagactcagatctggac
cagctgagtaagatctttgaagctctggggactcctacagatgacacctggcctgggatg
agtagtctacctgactatgtgtcatttaagttgtttcctggtactcctctggaacacatc
ttcagtgctgcaggagacgacctcttagagctactacagggtctattcaccttcaaccct
tccacacgccttacagctacacaggctctaaagatgaggtacttcagtaacagaccaggt
ccgacccccgggcaccagctgccccggcccaactcatcagcagaggctctcaaagagaag
gagaacctcaccatcggaatcaagaggaaacgagacggactggagacgagcaccataaag
aagaaactgatactgtga
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