Oncorhynchus kisutch (coho salmon): 109881048
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Entry
109881048 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein 29-like
KO
K20644
Rho GTPase-activating protein 29
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109881048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109881048
Membrane trafficking [BR:
oki04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
109881048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMIP-like_FCH
RhoGAP
RHG29_45_N
C1_1
Motif
Other DBs
NCBI-GeneID:
109881048
NCBI-ProteinID:
XP_031665749
LinkDB
All DBs
Position
LG30:complement(44119732..44208907)
Genome browser
AA seq
1550 aa
AA seq
DB search
MIRKSSSGTGGGGGEEEEGNNTKHQQNKPHRSSNTTQGPSHLSNMGRSSRTTNPLGSMGL
GSNSLGLGSTVVGAPGLDPDYVMQLVNDVRRFSDMLLSLKEAFHSEESHEGLPQRVQERL
SELLRVLKSVIGKHQTLNSVDILRAAGTVITKVKGINFTEVNQEKKKVIFGEIYASIDSL
AFTFGNVVSDFLMGDVDSQSGLGIPQTRRSRSFENLSVDSGGYVPEKKGLVGPEVALSKE
EEVDVILQKNDSGVESALLYAKAWSKYTKDLLAWVDKRLGLDIECAKSYAKMAESAKTLA
SQQDYMPFRDIYMSTFKNDIEYSQVLLQTATALQTNKFIQPLLSRKTELDKLRKDLKEQW
QREQKKMQESEAALRKARWTQVQRRDEYHKAQSSASRSQEEQSKQLDKKRKLEEEALQKA
EDARDQYRSCVTDAGARRAELASTKTDILTQIRELVTQCDLTLKAVTVNWLQLQQAQTVS
LPGHYQALCENAKMYEPGQRYAEFVRNLPKDQIHMESFSVDERFPVFSKRSTGSTSSHSN
LSHVSLISGDVLSGDEVDSPLGSRPGERSNSATDIQGLRGGQGPLRAWVSGVQDRGMCSD
SESAGGSSESQSMDSPTASPGDFKRRLPRTPSTGTMSSADDLDERQPPSPSDNGLGEMVT
ETASSPGPFRNAQMSKASQTHKLRKLRAPSKCRECDSLVVFHGAECEECSLACHKKCLET
LAIQCGHKKLQGRLQLFGIDFTQAAKNSPDGIPFIIRKCTSEIENRALNLKGIYRVNGAK
SRVEKLCQAFENGKDLVELSDLSPHDIANVLKLYLRQLPEPLILYRYYNDFIGLAKESQR
VIIEEKAIARVLQEQGQPGGEQPRLGGTQPGVEGEQPPLTNQPTWRRRAAQTASIKLNRV
IFKIRDLLRQLPPAHYRTLRFLTAHLHRVTEQAEENKMTASNLGIIFGPTLVKPRQTDAE
VSLSSLVDYPYQALMVELLVRHFQVIFDFPSSYPPITTSTVGQSSPRLTPQEKEQRLSRH
STSLLDMKESAKVDKRHSSVIQSSQTLDDVREVKTDRRELTASSSSSAAGSSSSAAGSSS
SAAGSASVQRSTLVFGRPSLNLSSSATAPKVQLRPQRARILSRPISMPLERLPLPTPSQV
LDRNSRNNTLDPTANTIVESAEPEKPRIGGGSRVSTYYIDTQQAVQRRPWDRKYKHYDVT
PRTAMIMANLPPAGTGPGPKPGKQPTMPTQLSVSGPTSSALPSSSSFSTIFPSNPYTVLL
KAGQASTRDREETKDRPNSAAGGGGETRTSTNSPIKFRQPRILQPPPGTFYKPSGYSGAR
GWPSLSTSGTTSLTKMSPTSPTVKATSQTSPTVKASSQTSPTVKTFSPTSPTVKTFSPTS
PTVKAFSPTSPTVKTFSPTSPTVKTFSPTSPTVKTFSPTSPTVKTFSPTSPTVKTFSPTS
PTVTAPLPLSSSQSSSMTFSSSPMVTTTTTPSPTATYILQTSHLPTHTLQDSVDSSVSVD
PEVTTSADLSPRQSPPPSSPEVVPLQQRLRPRPRPGARLQELEHREAHFV
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgatacggaagagcagcagtggtactggaggaggaggaggagaagaagaagaagggaat
aatacaaaacaccaacagaacaaaccgcatcgctccagcaacaccacccagggcccgtct
catctctccaacatgggccggagctccaggaccaccaacccactggggagtatggggctt
gggtccaacagtttgggtctggggtccaccgtggtaggagcgcctgggctagatccggac
tatgtgatgcagctggtgaatgacgtacggaggttttcagatatgctgctcagccttaaa
gaagccttccattctgaagaaagccacgagggactccctcagcgggtacaggagaggttg
agcgagctgctccgtgttctcaagtctgtcatcggcaaacaccagaccctcaactctgta
gacatcctcagggctgccggcaccgtcatcactaaggtcaaaggcattaacttcacggaa
gtgaaccaggaaaagaaaaaggttatattcggcgagatatacgcgtccattgacagtttg
gcattcacatttggcaatgtagtgtctgacttccttatgggagatgtggacagccaatca
gggttggggatcccccagaccagaagaagcaggtctttcgagaacctctctgtggattct
ggggggtatgttccagagaagaaaggccttgtgggcccagaggtggcgctgtctaaagag
gaggaggttgacgtgatcctgcagaagaacgacagcggggtggagtcagctctgctctat
gccaaggcctggtccaagtacaccaaggatctgctggcctgggtcgacaaacgcctggga
ctggacattgaatgtgccaaaagttatgccaaaatggcagaatctgcaaagacgctcgcg
agtcaacaggactacatgccgttcagagatatctatatgtctacgtttaagaacgacatt
gagtacagccaagtcctcctgcagactgccactgccctgcagaccaacaaattcatacag
ccgctgttgtccagaaagactgagctggacaaactgaggaaagacctcaaggagcagtgg
cagagagaacagaagaaaatgcaagagtccgaggcggctctgcgtaaggctcggtggacc
caggtccagaggagagacgagtaccacaaggcccagtcctcagccagccgctcccaggag
gaacagtccaaacagctggacaagaagaggaaactggaagaggaggctcttcagaaggct
gaggatgccagagaccagtacagatcctgtgtaactgatgcaggggccaggagggcagag
ctggccagcaccaagacagacatcctcactcagatcagagaactggtgacccagtgtgac
ctcacactcaaagctgtgacagtcaactggctccagctgcagcaggcccagaccgtgtct
ctacccggccactaccaggccctgtgtgaaaacgcgaagatgtacgagcctggacagaga
tacgccgagtttgtccgtaatcttcccaaagatcagatacacatggagtccttctccgtc
gatgaacggtttcctgtgttcagcaagcgttcaacgggcagcaccagttcccatagtaac
ctgtcccatgtgtccctcatctccggtgacgtcctgagtggcgacgaggtggatagtcct
ctggggtcacgacctggggaaaggtccaacagcgccacggacatacaaggtctgagaggg
ggacagggcccgttgagagcctgggtatcaggtgtccaggacagggggatgtgtagtgac
tcagagagtgctggaggcagcagtgagtcccaatccatggactcccccacagcgagccca
ggtgactttaaacgcagactacccagaaccccctccactggcactatgtcctcggcagac
gacctcgatgagagacagccaccttcaccctcagacaatggtctgggtgagatggtgaca
gagacagccagttccccaggtccgtttcgcaacgcccagatgtccaaggcgtctcagaca
cacaagctgaggaaactcagagctccgtctaaatgcagggagtgtgacagtctggtggtg
ttccacggagcagaatgtgaagagtgctccctggcgtgtcataagaagtgtctggagact
ctggccatccagtgtggtcataagaaactgcagggacgactacagctgtttgggatagac
tttacccaggcagcgaagaacagcccagatgggatccccttcatcatcaggaagtgtacc
tctgagatagagaacagagcgctcaacctcaagggaatctaccgtgtgaatggggctaag
tctcgtgtggagaagctgtgtcaggcgtttgagaacggcaaagacctggtagagctctct
gacctctcaccccacgacatcgccaacgtgctcaaactctacttgagacagttaccagag
ccgttgatcctgtaccgctactataatgacttcatcggattggccaaggagagccagagg
gtgatcatcgaagagaaggctatagccagggtcctccaggaacaggggcagccagggggt
gaacaaccccgactaggaggcacccagcctggggtagagggagagcagcctcccctgaca
aaccagccaacctggaggaggagagctgcccaaacagccagtatcaaactcaacagagtc
atctttaagattagagacctgttacgacagcttcctcctgcacactacaggaccctccgc
ttcctcacggcacacctacatagggtgacggagcaggcagaggagaacaagatgacagcc
agtaatctgggcattatctttggccctacgctggtcaaaccccgacagactgatgcagag
gtctccctgtcttctctggtcgactacccctaccaggctctgatggtggagctgctggta
cgtcacttccaggtgatctttgacttcccctcctcctacccccccatcaccacctccacg
gtgggccagtcctccccccgactcacccctcaggagaaggagcagagactcagccgccac
tccacctccctgctcgacatgaaggagagtgccaaagtcgacaagaggcactcgtcagtc
atccagtcctctcaaaccctggatgatgtgagagaggtgaagacagacaggagagagtta
acagccagctcctcctcctctgctgctggctcctcctcctctgctgctggctcctcctcc
tctgctgctggctctgcctcggtccagagatctaccctggtgtttggccgtcccagcctc
aacctctcctcctctgctacggccccgaaggtccagctccggccccagcgcgctagaatc
ctgtctcgaccaatcagcatgcccctggagcgcttgcccctccccaccccctcacaggtg
ctcgacagaaacagccgtaacaacacgttggatcccaccgctaacaccatcgtggagtca
gccgagccggagaagcctcggattggtggggggtcaagggtcagtacctattacatcgac
acccagcaggccgtgcagcggaggccctgggacaggaagtacaaacactacgacgtcacg
ccacgcaccgccatgatcatggctaatttaccgccggccggtactggccctggcccaaaa
ccggggaaacagccgacgatgccgacacaactgtccgtgtctgggccaaccagctctgct
ctcccatccagtagtagtttcagcactatattccccagtaacccatacacagtgttgttg
aaggctggccaggcgtccacaagagaccgagaggagactaaggataggcctaactctgct
gctggagggggtggggagaccagaacatctaccaactcccccataaagttcagacaacca
aggattctgcagcctccacccggaaccttctataagccgtctggttattcaggcgccaga
ggctggccatcattaagtacctctgggaccactagcctcaccaaaatgtccccaacttct
cctactgttaaagccacttcccagacttctcctactgttaaagcctcttcccagacttct
cctactgttaaaaccttctcaccaacctcccctactgttaaaaccttctcaccaacctcc
cctactgttaaagccttctcaccaacctcccctactgttaaaaccttctcaccaacctcc
cctactgttaaaaccttctcaccaacctcccctactgttaaaaccttctcaccaacctcc
cctactgttaaaaccttctcaccaacctcccctactgttaaaaccttctcaccaacctcc
cctactgtcactgctcctctccccctctcttcctcccaatcctccagcatgactttctcc
tcttctcctatggttaccaccaccaccaccccatcccctactgccacctacatccttcaa
acctcacacctccccacacacaccctacaggactctgtggacagctctgttagtgttgac
cccgaggtcacgacctccgctgacctttccccccgccagtcccctccccccagcagccca
gaggtcgtcccactgcaacaaagactgagaccccggcccagacccggcgctcgcctgcag
gagttagagcacagagaggcccattttgtctga
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integrated database retrieval system
