Oncorhynchus kisutch (coho salmon): 109881063
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Entry
109881063 CDS
T09179
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109881063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oki03036
]
109881063
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
109881063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
109881063
NCBI-ProteinID:
XP_031663707
LinkDB
All DBs
Position
LG28:complement(49737049..49756917)
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AA seq
728 aa
AA seq
DB search
MKQVLEYALDRAEYIVESARQQPAKRRALSGGRKSLYQKLYELYIEECDKEPELKKLRRN
VNLLEKLVSQESVSCLVVNLYPGNQGYSLMLLGKNGSDSETIRLPYEEGQLLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVVAEVRDYRQSGNTKMPSFQSRHVLLRPTMQTLICDVHAM
TSDHHKWTQDDKFQLESQLLLATADPLCLDPSISVTCTANHLLYNKQKMNTHSMKRCFKH
HSRAALNRQQELSYLPTPPQLRLYDYLQRRKERKPAPSIDLKISKAGKVEITITLTQFTN
TFLEIQSQQHTEFRLTSHRSVPFSRLQCVDMWKQSHCQLSVPKEIDVEKYAVVEKSVKLQ
ESQPTVWPAEEVIDDYTFECEVGGQRTKVSIFQSVGDPLVYGKIYCAEEDSSDLHLVHPA
FLIGSKRDADRFLSQYKGVYEQDVKCQVKMSRNSGIMGQNQLSASRETEVDGLSALVQSS
GVLGKGVKHRPPPIKIPSGSGSSSSGNLYSSAQATSGLLKCLTPPPGTGPGSAKPQSLSR
KHSVELGQGLQLGGQLGQVGLLSPAALSPMASTQRSGTPKPSTPTNTPCSTPHPPDSLLS
LPPSVTPTPPDPQALLTSQQQLSLPVMTIPLPTMRTSITTGTSSSQVMANPAGLNFLNVV
GSVCSPQTLMTSSQMLGPGLNLSGLGGLMPTTPVAILAPPNAAAANGYGGDGPSGGVATA
TYRQPTNK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagttttggaatatgcattggatcgggctgagtacattgttgaaagtgctcgt
caacagccagccaagaggagagcgttgtccggagggaggaagagtctatatcagaaacta
tacgagctctacatcgaagagtgtgacaaagaaccagagctcaagaagctgcgtaggaat
gtcaacctgctggagaagctggtgtctcaggagtcagtgtcttgtctggtggtcaacctt
taccccggcaaccagggatactccctcatgctcctcggcaagaatggatctgactctgag
acgatccgtctgccatatgaggaaggacagctgttggagtacctggacgccgaggagctt
cctcctatcctggtggatctcttagagaagtcccaggtgaacatcttccactgtggctgt
gtggtagctgaggtccgagactacagacagtctggcaacactaagatgccatccttccag
agcagacacgtcctgctacgacccaccatgcagacactgatctgtgatgtccatgcaatg
accagtgaccaccacaaatggacacaggatgataagttccagttggagagccagttactg
ctggccacagctgatcctctgtgtctggatccatctatctctgtcacctgtacagccaac
cacctgctctataacaagcagaagatgaacactcactctatgaaacgttgttttaagcat
cactctcgggcggcactgaaccgtcagcaggagctgtcctacctgcccacgcccccccag
ctgcgtctctatgactacctgcagaggaggaaggagaggaagccggccccctcgatagac
ctgaagatctccaaagccggaaaagttgagatcacaattacccttacccaatttacaaac
acctttttagaaatccaatcccaacaacacactgagttcagactgacctctcaccgttct
gtccccttctctcgtttacagtgtgtggacatgtggaaacagagccactgccaactctct
gtccccaaggagattgatgtagagaaatatgcagtggtagagaagtcagtgaagttgcag
gaatctcagcccactgtctggcctgcagaggaagtgatagatgactatacgtttgagtgt
gaggtcggaggccagaggaccaaggtgtccatcttccagtcggtgggcgaccctctggtc
tacggaaagatctactgcgctgaggaagacagcagcgaccttcacctcgtacacccagcg
ttcctaataggctcaaagagagatgctgatcggtttctatcccagtataaaggtgtgtat
gagcaggacgtgaagtgccaggtgaaaatgtctcggaactcaggcatcatgggacagaac
caactctcagccagtagagagacagaggtggatggtctatcagccttggttcagtcgtca
ggtgtgttggggaagggggtgaagcaccggcctccccccatcaaaataccctccgggtcg
ggcagcagctcctcaggtaacctgtatagttcagcccaggctaccagtggtctccttaag
tgtcttacgccccccccaggaacaggccccggctcagccaagccccagtctctgagtagg
aagcactctgtggagctggggcaggggttacagctgggggggcagttaggacaggtgggg
ttgttgtccccggcagccctatctcccatggcgtcgacacagagatcggggaccccgaag
ccgtccacccccaccaacaccccttgttccacccctcacccccccgactccctcctttcc
ctccctccctccgtcacccccacccctccggacccccaggccctcctgacctcccagcag
cagctgtccctacctgtaatgaccatccctctacccaccatgagaacctccatcacaaca
ggaaccagctcctctcaggtcatggctaaccctgctggactcaacttcctcaacgtggtg
ggatctgtctgcagtccccagactctgatgacttccagtcagatgttgggtcctggtctc
aacctgagtggtctgggaggactgatgcctaccacaccagttgcaattcttgcaccacca
aatgcagcagcagcaaatggctatgggggagacgggccctcagggggcgtcgccacggct
acataccgccagccaaccaataagtaa
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