Oncorhynchus kisutch (coho salmon): 109881129
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Entry
109881129 CDS
T09179
Name
(RefSeq) terminal nucleotidyltransferase 4A isoform X2
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109881129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109881129
03016 Transfer RNA biogenesis [BR:
oki03016
]
109881129
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109881129
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109881129
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109881129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
109881129
NCBI-ProteinID:
XP_020328872
Ensembl:
ENSOKIG00005017365
LinkDB
All DBs
Position
LG14:67010258..67022942
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AA seq
767 aa
AA seq
DB search
MDPRVAWIQPEQKGPANAFWMQVWETSQVRANSGQHLHNNQNYNLHLNSPALDVYKHVAA
KGNSMCTNTGLSSSSHHGISKGTTSNHGTAFSSFGVTLPNGPVQNSLTPSNAYGVTTDLG
DSKMPQKTGSLSSLSSVESITDSTSSNRSLGKISGGNVTGNMNKNAGGVNLLFNFSESMH
NNVNQYHHQRHHQHHPQYNFQQNCVKRHPTHPPASPNNHTHHPGRRKSDNKASTYGMNYL
LSNYGNYVSSGTGTPWKTRKYSPGVDGLHEEVVDFYNFMSPRPEEAAMRKEVVDRIETVI
KELWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWECPPLQQLEQALRKHNVAEPFSIKVL
DKATVPIIKLTDQETEVKVDISFNVETGVKAAFFIKDYTRRYPVLPYMIFVLKQFLLQRD
LNEVFTGGISSYSLILMVISFLQLHPRIDASNPNINLGILLIEFFELYGRHFNYLKTGIR
VKNGGAYMAKEDMMKVMTNGYRPSMLCIEDPLMPGNDVGRSSYGAMQVQQVFDYAYIVLS
HAMSPLARSYPNKDIDSALGRIIKVTQEVIDYREWIMTKWGGRHLARMESQGSLLDQDPT
GCVLGVGVEEQRDSVSPHSADSPMSLSSPHQHSSASSVSSLSGSDNDSDSTPPALPLYPF
QALGMTLPLGLALGKAGINQHHLIMSPGSQACMSLPGTLTMHSLPGRQNGPKCQMKGFHS
PAVVHSPALANRAHTHPLTHAHTHSHTQYRNTWRRRKRDSLPVSLSR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagggtggcttggattcagcccgagcagaaaggacctgcaaacgcattttgg
atgcaagtctgggagacttctcaggtacgagcaaactccggccagcatcttcataataat
cagaactacaacctacatttgaattctccagcgttggacgtttataaacatgttgcggca
aagggcaatagcatgtgcaccaacactggtctgagcagcagcagccatcacggtatttca
aaaggcactacttctaaccacggcactgcgttctcctccttcggggtaacgttaccgaac
ggacccgtacagaactcattgaccccgtccaacgcttacggggtaacgacagatttggga
gacagtaaaatgccccaaaagacgggatctctatcgtccttgtcttcagtggaatccata
acggacagcacatcttcaaaccgctctttgggaaagattagtggtggcaatgtaactgga
aatatgaataaaaacgctggcggtgtcaatctgttatttaacttcagtgaaagcatgcat
aataatgtcaaccaataccaccatcaaagacaccatcagcatcaccctcagtacaatttc
caacagaattgtgtgaagcgtcacccgactcacccgcctgcatccccaaataaccacact
caccatccaggccgaaggaaaagtgacaacaaggcgagcacctatgggatgaattacctt
ctttctaactatggcaactatgttagttcggggactgggacgccttggaagacgaggaaa
tacagccccggtgttgatggtctccatgaggaggttgtggacttctacaacttcatgtct
ccccgaccggaggaggctgctatgaggaaggaggtggtcgacaggatcgagactgtcatc
aaggagctgtggcctactgccgatgtgcagatttttggcagcttcagcactggactctac
ctacctacaagtgacatagacctggtggtgtttgggaagtgggaatgtcccccgttgcag
cagttggaacaggccctccggaaacacaacgtggcggaacctttctccatcaaagtgctg
gacaaagctacagtgccaatcatcaagctgactgaccaggagactgaagtcaaagtggac
atcagcttcaacgtggagactggagtcaaagctgctttctttatcaaggactacactcgg
aggtatcccgtgctgccttacatgatctttgtgctgaagcagtttctgctccagagagat
ctcaatgaggtgttcaccggaggaatcagctcttacagcctcatcctgatggtcatcagc
ttcctccagctccacccaaggattgacgccagcaaccccaacatcaaccttggcattctg
ctgattgagttctttgagctttatgggcgccattttaactacctgaagacgggcatccgc
gtcaagaatggaggggcctacatggccaaggaggacatgatgaaggttatgaccaatggc
tacaggccctccatgctctgtatagaggacccactgatgccaggtaacgacgttggcagg
agttcgtacggagccatgcaagtccagcaggtctttgactacgcttacatcgtcctcagt
cacgccatgtcaccgctagcacgctcctacccaaacaaggacattgacagcgctttgggt
aggataatcaaggtgacacaggaagtgattgactacagggagtggatcatgacgaagtgg
gggggcaggcacctcgcccgtatggagagccagggttccctcctggatcaggacccaaca
gggtgtgtgttgggtgtaggtgtggaggagcagagggactctgtttcccctcacagtgca
gactctcccatgtccctttccagtcctcaccaacactcctcagcctcctctgtctcttca
ctgtctgggtcagacaacgactctgattcgacacccccggcgctgcccctctaccccttt
caggctttgggtatgactctacccctgggcctggcactgggcaaggctggcatcaaccag
caccacctcatcatgtcccctggctcacaggcgtgtatgtctttgcccggtaccctgacg
atgcactctttacctggcagacagaacggtcccaagtgtcagatgaaaggtttccacagt
ccagccgtggtccacagtcctgccctggccaaccgtgcacacacccaccctctcacacac
gcccacacacactctcacacacagtaccgcaacacctggcggcgtcggaagagggacagc
ttaccagttagcctgagcagataa
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