Oncorhynchus kisutch (coho salmon): 109881192
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Entry
109881192 CDS
T09179
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04080
Neuroactive ligand-receptor interaction
oki04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109881192
04082 Neuroactive ligand signaling
109881192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oki04040
]
109881192
Ion channels [BR:
oki04040
]
Ligand-gated channels
GABA-A
109881192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
DUF6681
Motif
Other DBs
NCBI-GeneID:
109881192
NCBI-ProteinID:
XP_031694010
Ensembl:
ENSOKIG00005042072
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All DBs
Position
LG13:complement(1594730..1671701)
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AA seq
465 aa
AA seq
DB search
MGDGMRCGCAMSKVWVFVLLVSVTCRLSLSQTPAVTTTEPLKEAELNDNITIFTRILDRL
LDGYDNRLRPGLGEKVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFQGPMK
MLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLKDDGTLLYTMRLTISAECPMQ
LEDFPMDAHACPLKFGSYAYPVSEVVYSWTQGAAKSVVVAEEGSRLNQYHLIGQTAGTED
IYTSRGQYTVMMCHFYLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTT
VLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKA
MEDTRKKNPTALSKKPNNTCSAGVSYTPNLTKDNAIATISNSADIQLKLAEVKTPDPKKT
YNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPGIKGAVNPYT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgggatgcgctgcggctgtgctatgtccaaagtctgggtcttcgtcttgcta
gtgagcgtcacctgccgtctgagcctttcccagaccccagcagtaaccactacagaaccc
ctaaaagaggcggagctaaatgacaacatcaccatctttacccgaatactggacagactg
ctggacggctatgacaacaggctacgtcctggtctgggagagaaggtgaccgagatcaag
accaacatatttgtgaccagctttggtcccgtttctgatactgaaatggagtacaccata
gatgtgttcttcagacagagctggaaggacgaacgtctgcgtttccaaggccccatgaag
atgttaccattaaacaacctcctggcgtctaacatctggaccccagacaccttcttcctc
aacgggaagaaatctatcgcccacaacatgaccacgcccaacaaacttctccgactcaaa
gacgacgggacactgctctacactatgaggttaaccatctcagcagaatgccccatgcag
ttagaggacttccccatggatgcccacgcctgtcctcttaagtttggaagctatgcgtat
cctgtgtctgaggtggtgtattcgtggacccagggagcagccaagtcagtggtggtggca
gaggaggggtcacgactcaaccagtatcatctgataggacagaccgctggcactgaggac
atctatactagcagaggtcagtacacagtgatgatgtgtcacttctatctgaagaggaag
atcggctatttcgtcattcagacctacatgccctgcttcatgaccgtcatcctctcccag
gtgtccttctggctcaaccgtgagtctgtccccgccaggactgtcttcggtgtgactacc
gtgctgaccatgaccactcttagcatcagtgcccgtaactctctgcccaaggtggcgtat
gccacagccatggactggttcatagcagtctgttatgccttcgtcttctctgctcttatc
gagttcgctaccgtcaactacttcaccaagaggagctgggcctgggatgggaagaaagcc
atggaggatacgcgtaagaaaaaccctacggctctgtccaagaaacctaacaacacctgt
tcagctggggtcagctacactcccaacctgactaaggacaatgccatcgccaccatctcc
aacagcgcagacatccagctgaaactggctgaggtcaagacccccgaccccaaaaagact
tacaacagcgtcagcaagatcgacaagatgtcccgtatagtgtttcctgttctgtttggg
acattcaacctggtgtactgggctacgtacctcaacagggaaccagggataaaaggagct
gtgaacccctatacatag
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