KEGG   Oncorhynchus kisutch (coho salmon): 109881245
Entry
109881245         CDS       T09179                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    109881245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oki03400]
    109881245
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     109881245
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WD_LRWD1 WDR54 Beta-prop_Vps41 Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 WD40_like RAWUL Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 109881245
NCBI-ProteinID: XP_020328987
Ensembl: ENSOKIG00005045698
LinkDB
Position
LG30:42405258..42430903
AA seq 681 aa
MAAHHRQNAAGRRKVQVSYVIRDEVEKHNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAQKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHSDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDKKIFCTDLRNPDIRVLICEEKAPVLKM
ELDRTADPPPVIWVSTTKSSVNKWCLKGIHNFRASGDYDNDIIAPLTPLCTAPEQVIKGG
ASIIQCHILNDKRHIVTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRFKQVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFTSSDGSDPKLNLGGLLLQALLEFWPRTHIN
PMDEEENEVNHAAVNGEQETRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETE
SMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVME
HVYEKIINLDTESQNTASSLAANDKPGETEKDEDMALMAEEKIELICQDQVLDPNMDLRT
VKHFIWKSGGDLTLHYRQKST
NT seq 2046 nt   +upstreamnt  +downstreamnt
atggcggcccaccacagacagaatgccgctgggcgaaggaaagtacaggtatcttatgtg
ataagagacgaggtggagaagcacaatcgcaatggggtgaatgctcttcagctggaccct
gcactgaaccggctcttcacggctggaagagactctatcatcaggatatggagtgtcaac
cagcacaagcaggacccttacatcgcttccatggagcaccatacagactgggtcaatgac
atcgtcctctgttgcaatggaaagacattgatatctgcttcatcagacacgacagtgaaa
gtgtggaacgcacagaaaggattctgcatgtcaacgttacggactcacaaggactatgtg
aaggcattggcatatgctaaagacaaggagctggtggcgtcagcagggttagacagacag
atcttcctgtgggacgtcaacacactaacagcactgactgcctccaacaacactgtcacc
acgtcgtccctcagtgggaacaaagactccatctacagcttggctatgaaccagatgggg
acagtcatcgtatctggctccactgaaaaggtcctgagagtatgggaccctagaacatgt
gctaagctgatgaagctgaaaggccactccgacaacgtcaagtcactgttgctgaaccgg
gacggcacacagtgtctgtcaggcagctcagatggaaccatcaggttgtggtctctgggg
cagcagaggtgtatcgctacgtatcgggtccacgacgagggagtgtgggccctgcaggtg
aacgaagccttcacacacatctactctggaggcagagacaagaaaatcttctgcaccgac
ctgaggaaccctgatatcagagtactcatctgtgaggagaaggcccctgtactgaagatg
gaactggacaggacagctgaccctcctcctgttatctgggtctctaccaccaagtcatct
gttaacaaatggtgtctaaagggaatccacaacttccgggcgtctggggattatgacaat
gacatcatcgcccccctgaccccgctgtgtacagcgcctgaacaggtcatcaaaggaggg
gccagtataattcagtgtcacattctgaacgacaagaggcacatcgtcaccaaagacacc
aacaacaatgttgcattctgggatgtactgaaagcctgtaagggagaggacctggggaaa
gtagagtttgatgaagagatcaagaagaggttcaagcaggtctacgtcccaaactggttc
tctgtcgacctcaagacagggatgctgaccatcacactggatgagagtgactgcttcgct
gcctgggtgtctgctaaggatgctggcttcacaagctctgatggatcggacccaaagttg
aaccttggtggactgctacttcaggccctgctagagttctggcccaggacgcacatcaac
cccatggatgaggaggagaacgaggtcaaccatgcagcagtgaatggggagcaggagacg
cgggtgcagaaggggaatgggtacttccaggtgcctccacacactccagtcatcttcgga
gaggcaggagggaggactctgttccgactgttgtgtagggactcgggtggggagacggag
tctatgttactgaatgagacagtcccacagtgggtcatagacatcactgtggacaagaac
atgccgaaattcaacaagatcccgttctacctccaaccccactcgtcttctggagccaag
acactgaagaaggaccgtctgtctgccagtgacatgctgcaggtgaggaaggtgatggaa
cacgtctatgagaagatcattaacctggacactgagtcccagaacactgcttcctccttg
gcagccaatgacaagccaggagagacagagaaggacgaggacatggccctcatggctgag
gagaagattgaactgatatgtcaagaccaggtcctggacccaaacatggacctgcgaact
gtcaagcattttatctggaaaagtggaggggacttgacgcttcactataggcagaaatct
acgtga

DBGET integrated database retrieval system