Oncorhynchus kisutch (coho salmon): 109881272
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Entry
109881272 CDS
T09179
Name
(RefSeq) integrin alpha-V-like
KO
K06487
integrin alpha V
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04081
Hormone signaling
oki04145
Phagocytosis
oki04148
Efferocytosis
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04514
Cell adhesion molecule (CAM) interaction
oki04518
Integrin signaling
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
109881272
04512 ECM-receptor interaction
109881272
04514 Cell adhesion molecule (CAM) interaction
109881272
04518 Integrin signaling
109881272
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109881272
04148 Efferocytosis
109881272
09144 Cellular community - eukaryotes
04510 Focal adhesion
109881272
09142 Cell motility
04820 Cytoskeleton in muscle cells
109881272
04810 Regulation of actin cytoskeleton
109881272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109881272
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109881272
04515 Cell adhesion molecules [BR:
oki04515
]
109881272
04090 CD molecules [BR:
oki04090
]
109881272
Membrane trafficking [BR:
oki04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
109881272
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109881272
Exosomal proteins of epithelial cells
109881272
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin alpha subunits
109881272
CD molecules [BR:
oki04090
]
Proteins
109881272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
LYRIC
Motif
Other DBs
NCBI-GeneID:
109881272
NCBI-ProteinID:
XP_031657484
Ensembl:
ENSOKIG00005001157
LinkDB
All DBs
Position
LG2:76409093..76478122
Genome browser
AA seq
1049 aa
AA seq
DB search
MERRRKLGLSLALILSCLQWTTSFNLDIDKPYVFSGPKGSYFGFAVDFFQPNNKQSNILI
GAPRANTSSASTVVERGAVYTCPWQKSSDCTQVQFDNTDDRENIDGVQMEFKSNQWFGAT
VRSDGEHILACAPLYQWSTFSLSEREPVGTCFLKKGGEVVEYSPCRSDGNSPERQGFCQA
GFSIDFVKNNRVVVGGPGSFYWQGQLISDDISEIIARFNNNYYTPYSNQLTTKSASAQYD
DSYLGYSVTVGDFNEDGEDDYVTGVPRGDKALGYVNIFNGRNMESMLNFTGTQMAAYFGH
SVAATDLNNDGLVDLFVGAPLFMDRGSDGKLREVGQVSVFLGKGGFSFHTPITLSGTEIY
SRFGSSIATLGDLDMDGFNDVAIAAPYGGPKHRGLVYIHNGRAAGPDPVPSQVLVGRWAS
SYMPPSFGYSLHGATDIDQNGYPDLIVGVFGADKAVLYRARPVISVNATLDISPQILNPQ
DRNCKLLDHDTPVSCFKVKYCVKASGRSAPASLKFQVDLVLDKHKHKGATKRVLFLHGKT
SRYTKNMTVSNGRGPACEEQEAFLIDDSEFRDKITPISVFMEFSLDYQQAADKTGLLPIL
DQSTPTNISKQAHILLDCGDDNICKPDLKLSVVSDQKEIYIGDDNPLTLEVTAENRGEGA
YEAELHVFIPPQADFTGVVRNSETLSRLSCAYKIENQTRVVVCDLGNPMKGGTKVLAGLR
FSVHQLSEQDTSVEFDLQMKSSNQFNNTSSRVLSITKLAVLAKVDIRGVSAPDQVFLPVA
NWQPKENPVVGDDIGPQILHVYELRNRGPSTFSKAMLDIEWPYRFNNGSLLYITKLEVDG
DGGMNCSTDMEINPLNVSNPLSGEKNITSPSGGGDRTEGRNRNHVHRRELERKEMEGDLE
TLDCSKVQCLKIRCQVGRVERGQSAILYIHSRLGVATFLKTESQNRSFTVRSSASFSVIE
MPYNKNLLPELPSNTTTVSMSVIWVKSEPEPVPWWVVTLALIAGLLLLALLIFVMYKLGF
FERVRPPQEDSAEKEQLAPQENGDRNTDA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggaaagacgtcgcaaacttggtttatctttggctttgatcctgtcctgtttacagtgg
acaacctctttcaatctggatattgacaagccctatgtattctctggtcctaaaggaagt
tattttggatttgctgtggattttttccagccaaataataagcagtcaaacattcttata
ggagctcccagagccaacacctcctcagcttctacagtggtggagcgaggggcagtctat
acctgcccatggcagaagagtagtgactgtacccaagtacagtttgacaatactgatgat
cgtgagaatatagacggagtccagatggagttcaagtccaaccagtggtttggagccacg
gtacggtctgatggtgaacacatcctggcctgtgctcctctctaccagtggagcacgttc
agcttatccgagcgagagcctgtaggtacgtgtttcctgaagaaaggaggagaggtggtg
gagtattctccctgtcgatctgatggtaactccccagaaaggcaaggattctgtcaggct
ggattcagtattgactttgtcaagaacaacagggtggttgtcggaggccctggtagtttc
tattggcaaggtcagctgatcagcgacgacatctctgagatcatcgcccggttcaacaac
aactactacactccttacagtaaccagctgaccaccaagtctgccagcgctcaatacgat
gacagttatttaggttactctgtgaccgtcggagacttcaatgaggatggagaagatgac
tatgttactggggtacccaggggagacaaagctctgggctatgtgaacatcttcaatggg
aggaacatggagtcaatgctgaatttcacaggaacgcagatggctgcctactttggccat
tcagtggcagcgaccgacctcaataatgatgggctggtggatctgtttgtaggggcccct
ctgttcatggaccgtggtagtgatgggaagctgagggaggtgggtcaggtgtctgtgttc
ctggggaagggaggcttctccttccacacacccatcacactgagtgggacagagatctac
tcacgcttcggcagttctatcgccacactgggggacctggatatggatggcttcaacgac
gttgccatagctgcaccctacggcgggccgaagcacaggggcctagtgtacatccacaat
gggagggctgcagggcctgacccagtgccttctcaggtcctagtggggaggtgggcctcc
tcttacatgccccccagctttggatactccctgcacggagccaccgatattgaccagaat
ggatacccagacttaatagtgggtgtatttggtgcagacaaagcagttctatacagggcc
cggccggtcatcagtgttaacgccaccctggacatcagccctcagatcctcaacccacag
gataggaactgcaaactgcttgaccatgacacaccagtgtcctgtttcaaagtgaagtac
tgtgtgaaggcgagtgggagaagcgccccagcctcactgaagttccaggttgacctggtg
ttggacaaacacaaacacaagggggcgacaaagagagttctgttcctccacggcaagaca
tcccggtacaccaagaacatgacggtcagcaacggccgaggaccagcctgcgaggagcaa
gaagcctttctcatagatgactctgagttccgggataagatcactcccatctctgtgttc
atggagttcagtctggactaccagcaggcagcagataagaccggcctactgcctatcctg
gaccagtctacgcccaccaacatctccaaacaggcccatatcctactggactgtggagat
gacaacatctgcaagccagacctcaagctgtctgtagtgagtgaccagaaggagatctac
ataggagacgataaccccttgaccctggaggtgaccgcggagaaccgaggagaaggggcg
tacgaggcagagctacatgtcttcattcctccccaggctgacttcaccggggtcgtacgc
aacagtgagactctgtctagattgtcctgcgcctacaagatagagaatcagaccagggtg
gtggtgtgtgacctggggaaccccatgaaaggaggaactaaagtgctggccggactacgt
ttcagcgtccaccagctctcagagcaggacacgtctgtggagtttgacctgcagatgaag
agttccaaccagttcaacaacaccagcagtcgggtcctcagcatcacaaagctggctgtc
cttgccaaggtggatatcagaggggtgtccgccccagaccaggtcttcctgcctgttgct
aactggcagcctaaagagaaccctgtcgtaggagacgacatcggcccacagatactgcac
gtctatgagttacgtaaccgaggtcccagtaccttcagcaaggccatgctggacatcgag
tggccctacaggttcaacaacggctctctgctctacatcactaaactagaggtggatgga
gacggaggcatgaactgcagtacagacatggagatcaacccactcaatgtctcaaaccct
ctatctggagagaagaacatcacctctccaagtggaggaggagacaggacagagggaagg
aacaggaaccatgttcaccgcagagagctggagaggaaggagatggagggagacctggaa
actctggactgttccaaggtccagtgtctgaagatccggtgtcaggtgggccgtgtggag
agaggtcagagtgctatcctctacatccactccaggctgggggtggccaccttcctcaag
actgagagccagaaccgatcgttcaccgtgagatcctccgcctccttcagcgtcatagag
atgccttataacaagaacctgttgcctgagctgccctccaacactactacggtgagtatg
tcagtgatctgggtgaaatcagaacctgaaccggtcccttggtgggtggtgaccttggcc
ctgatcgctggactactgctactggctctgcttatcttcgtcatgtacaagctgggtttc
ttcgagcgggtacgccccccacaggaagacagtgcggagaaggagcagctggcaccgcag
gagaacggtgacaggaacaccgatgcttga
DBGET
integrated database retrieval system