KEGG   Oncorhynchus kisutch (coho salmon): 109881272
Entry
109881272         CDS       T09179                                 
Name
(RefSeq) integrin alpha-V-like
  KO
K06487  integrin alpha V
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04081  Hormone signaling
oki04145  Phagocytosis
oki04148  Efferocytosis
oki04510  Focal adhesion
oki04512  ECM-receptor interaction
oki04514  Cell adhesion molecule (CAM) interaction
oki04518  Integrin signaling
oki04810  Regulation of actin cytoskeleton
oki04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    109881272
   04512 ECM-receptor interaction
    109881272
   04514 Cell adhesion molecule (CAM) interaction
    109881272
   04518 Integrin signaling
    109881272
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    109881272
   04148 Efferocytosis
    109881272
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109881272
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109881272
   04810 Regulation of actin cytoskeleton
    109881272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109881272
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109881272
   04515 Cell adhesion molecules [BR:oki04515]
    109881272
   04090 CD molecules [BR:oki04090]
    109881272
Membrane trafficking [BR:oki04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    109881272
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109881272
  Exosomal proteins of epithelial cells
   109881272
Cell adhesion molecules [BR:oki04515]
 Integrins
  Integrin alpha subunits
   109881272
CD molecules [BR:oki04090]
 Proteins
  109881272
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3 LYRIC
Other DBs
NCBI-GeneID: 109881272
NCBI-ProteinID: XP_031657484
Ensembl: ENSOKIG00005001157
LinkDB
Position
LG2:76409093..76478122
AA seq 1049 aa
MERRRKLGLSLALILSCLQWTTSFNLDIDKPYVFSGPKGSYFGFAVDFFQPNNKQSNILI
GAPRANTSSASTVVERGAVYTCPWQKSSDCTQVQFDNTDDRENIDGVQMEFKSNQWFGAT
VRSDGEHILACAPLYQWSTFSLSEREPVGTCFLKKGGEVVEYSPCRSDGNSPERQGFCQA
GFSIDFVKNNRVVVGGPGSFYWQGQLISDDISEIIARFNNNYYTPYSNQLTTKSASAQYD
DSYLGYSVTVGDFNEDGEDDYVTGVPRGDKALGYVNIFNGRNMESMLNFTGTQMAAYFGH
SVAATDLNNDGLVDLFVGAPLFMDRGSDGKLREVGQVSVFLGKGGFSFHTPITLSGTEIY
SRFGSSIATLGDLDMDGFNDVAIAAPYGGPKHRGLVYIHNGRAAGPDPVPSQVLVGRWAS
SYMPPSFGYSLHGATDIDQNGYPDLIVGVFGADKAVLYRARPVISVNATLDISPQILNPQ
DRNCKLLDHDTPVSCFKVKYCVKASGRSAPASLKFQVDLVLDKHKHKGATKRVLFLHGKT
SRYTKNMTVSNGRGPACEEQEAFLIDDSEFRDKITPISVFMEFSLDYQQAADKTGLLPIL
DQSTPTNISKQAHILLDCGDDNICKPDLKLSVVSDQKEIYIGDDNPLTLEVTAENRGEGA
YEAELHVFIPPQADFTGVVRNSETLSRLSCAYKIENQTRVVVCDLGNPMKGGTKVLAGLR
FSVHQLSEQDTSVEFDLQMKSSNQFNNTSSRVLSITKLAVLAKVDIRGVSAPDQVFLPVA
NWQPKENPVVGDDIGPQILHVYELRNRGPSTFSKAMLDIEWPYRFNNGSLLYITKLEVDG
DGGMNCSTDMEINPLNVSNPLSGEKNITSPSGGGDRTEGRNRNHVHRRELERKEMEGDLE
TLDCSKVQCLKIRCQVGRVERGQSAILYIHSRLGVATFLKTESQNRSFTVRSSASFSVIE
MPYNKNLLPELPSNTTTVSMSVIWVKSEPEPVPWWVVTLALIAGLLLLALLIFVMYKLGF
FERVRPPQEDSAEKEQLAPQENGDRNTDA
NT seq 3150 nt   +upstreamnt  +downstreamnt
atggaaagacgtcgcaaacttggtttatctttggctttgatcctgtcctgtttacagtgg
acaacctctttcaatctggatattgacaagccctatgtattctctggtcctaaaggaagt
tattttggatttgctgtggattttttccagccaaataataagcagtcaaacattcttata
ggagctcccagagccaacacctcctcagcttctacagtggtggagcgaggggcagtctat
acctgcccatggcagaagagtagtgactgtacccaagtacagtttgacaatactgatgat
cgtgagaatatagacggagtccagatggagttcaagtccaaccagtggtttggagccacg
gtacggtctgatggtgaacacatcctggcctgtgctcctctctaccagtggagcacgttc
agcttatccgagcgagagcctgtaggtacgtgtttcctgaagaaaggaggagaggtggtg
gagtattctccctgtcgatctgatggtaactccccagaaaggcaaggattctgtcaggct
ggattcagtattgactttgtcaagaacaacagggtggttgtcggaggccctggtagtttc
tattggcaaggtcagctgatcagcgacgacatctctgagatcatcgcccggttcaacaac
aactactacactccttacagtaaccagctgaccaccaagtctgccagcgctcaatacgat
gacagttatttaggttactctgtgaccgtcggagacttcaatgaggatggagaagatgac
tatgttactggggtacccaggggagacaaagctctgggctatgtgaacatcttcaatggg
aggaacatggagtcaatgctgaatttcacaggaacgcagatggctgcctactttggccat
tcagtggcagcgaccgacctcaataatgatgggctggtggatctgtttgtaggggcccct
ctgttcatggaccgtggtagtgatgggaagctgagggaggtgggtcaggtgtctgtgttc
ctggggaagggaggcttctccttccacacacccatcacactgagtgggacagagatctac
tcacgcttcggcagttctatcgccacactgggggacctggatatggatggcttcaacgac
gttgccatagctgcaccctacggcgggccgaagcacaggggcctagtgtacatccacaat
gggagggctgcagggcctgacccagtgccttctcaggtcctagtggggaggtgggcctcc
tcttacatgccccccagctttggatactccctgcacggagccaccgatattgaccagaat
ggatacccagacttaatagtgggtgtatttggtgcagacaaagcagttctatacagggcc
cggccggtcatcagtgttaacgccaccctggacatcagccctcagatcctcaacccacag
gataggaactgcaaactgcttgaccatgacacaccagtgtcctgtttcaaagtgaagtac
tgtgtgaaggcgagtgggagaagcgccccagcctcactgaagttccaggttgacctggtg
ttggacaaacacaaacacaagggggcgacaaagagagttctgttcctccacggcaagaca
tcccggtacaccaagaacatgacggtcagcaacggccgaggaccagcctgcgaggagcaa
gaagcctttctcatagatgactctgagttccgggataagatcactcccatctctgtgttc
atggagttcagtctggactaccagcaggcagcagataagaccggcctactgcctatcctg
gaccagtctacgcccaccaacatctccaaacaggcccatatcctactggactgtggagat
gacaacatctgcaagccagacctcaagctgtctgtagtgagtgaccagaaggagatctac
ataggagacgataaccccttgaccctggaggtgaccgcggagaaccgaggagaaggggcg
tacgaggcagagctacatgtcttcattcctccccaggctgacttcaccggggtcgtacgc
aacagtgagactctgtctagattgtcctgcgcctacaagatagagaatcagaccagggtg
gtggtgtgtgacctggggaaccccatgaaaggaggaactaaagtgctggccggactacgt
ttcagcgtccaccagctctcagagcaggacacgtctgtggagtttgacctgcagatgaag
agttccaaccagttcaacaacaccagcagtcgggtcctcagcatcacaaagctggctgtc
cttgccaaggtggatatcagaggggtgtccgccccagaccaggtcttcctgcctgttgct
aactggcagcctaaagagaaccctgtcgtaggagacgacatcggcccacagatactgcac
gtctatgagttacgtaaccgaggtcccagtaccttcagcaaggccatgctggacatcgag
tggccctacaggttcaacaacggctctctgctctacatcactaaactagaggtggatgga
gacggaggcatgaactgcagtacagacatggagatcaacccactcaatgtctcaaaccct
ctatctggagagaagaacatcacctctccaagtggaggaggagacaggacagagggaagg
aacaggaaccatgttcaccgcagagagctggagaggaaggagatggagggagacctggaa
actctggactgttccaaggtccagtgtctgaagatccggtgtcaggtgggccgtgtggag
agaggtcagagtgctatcctctacatccactccaggctgggggtggccaccttcctcaag
actgagagccagaaccgatcgttcaccgtgagatcctccgcctccttcagcgtcatagag
atgccttataacaagaacctgttgcctgagctgccctccaacactactacggtgagtatg
tcagtgatctgggtgaaatcagaacctgaaccggtcccttggtgggtggtgaccttggcc
ctgatcgctggactactgctactggctctgcttatcttcgtcatgtacaagctgggtttc
ttcgagcgggtacgccccccacaggaagacagtgcggagaaggagcagctggcaccgcag
gagaacggtgacaggaacaccgatgcttga

DBGET integrated database retrieval system