Oncorhynchus kisutch (coho salmon): 109881361
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Entry
109881361 CDS
T09179
Name
(RefSeq) terminal nucleotidyltransferase 4B-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109881361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109881361
03016 Transfer RNA biogenesis [BR:
oki03016
]
109881361
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109881361
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109881361
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109881361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
109881361
NCBI-ProteinID:
XP_031687071
Ensembl:
ENSOKIG00005018153
LinkDB
All DBs
Position
LG8:74457237..74494689
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AA seq
643 aa
AA seq
DB search
MDPRIAWFQPEQRGPANSLWMQIWETTQGLGNLYFNNNCNTGSLSSLSPKKNINGTLGNV
ISCKNGAVTNSEPRNQGMSNSTKDRDVVEQRDFIPLEANNNHNNRSSLGRGSAGGQVCSR
VSGVSGHPNKRKRDNKASTYGFNSSLDTGGCGYTGTPWKVKNYSEGILGLHEEINDFYKH
MSPRAEEERMRMEVVDRIERVIKDLWPTADVQVFGSFSTGLYLPTSDIDLVVFGNWENLP
LWTLEEALRKKNVTDENSIKVLDKATVPIIKLTDFRTEVKVDISFNVKNGVKAALLIKDY
KKKYPVLPKLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHYREDACSPNANVG
VLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEFQKNTDLYRPSMLFIEDPLAPDNDVG
RSSYGVLQVKQAFDYAYVVLNHAVSPIAKYYPNNESESILGRIIRVTQEVAEYRDWITKL
WGPQSQNEPALNGNDVTLLVKPQQLDECNNNLTEEVTASRSKTSSNSSSLVSSSSSTVSS
SSDVDSDGTPCKTVKQLPGRGSSAHRESSGGVTNHRIQSHTTSTPTDNKGGKARLFRSSS
KNTHHVQQNSSNIKSHPSSKPHYQGNSKKRKPQQHSEAQDLCR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagaatcgcgtggtttcagccagaacaacgtggaccagccaacagcctgtgg
atgcagatttgggaaacaactcaaggactggggaatctgtacttcaataacaactgtaac
acgggtagtttgtcaagcctcagtccgaaaaagaacatcaacgggacattgggtaacgtg
atctcgtgcaagaacggagctgtcactaacagcgaaccccggaaccagggaatgtccaac
tcaacgaaagaccgagatgtagtcgaacaacgagactttattccgttggaagctaataac
aaccacaacaaccgttcatcgttggggaggggcagcgcaggggggcaagtgtgttctcgg
gtctctggggtctcgggacaccccaacaaaaggaaaagagacaacaaggctagcacttat
ggattcaacagtagcctcgataccggaggctgtggttacacgggaacaccatggaaagtc
aagaactactctgaaggaatcttggggctccatgaggagatcaatgacttctacaagcac
atgtctcctcgggcggaggaggagaggatgaggatggaggtggtggacaggatcgagagg
gtcatcaaagacctgtggcccactgctgacgttcaagtgtttgggagtttcagcacgggc
ctctatctgccaaccagtgacatcgatctggtggtgtttgggaactgggaaaacctgccc
ctttggaccctggaagaggccctgcggaagaaaaacgtgactgatgagaactccatcaaa
gtgctggacaaggccacggtacccatcatcaagttgacagacttccgcacagaggtgaag
gtggacatcagcttcaatgtgaagaatggagtcaaagctgcccttctcatcaaagactac
aaaaaaaaatacccagtgcttccgaagttggttctggtgctgaagcagttcctgctccag
agggatctgaatgaggttttcactggagggatcggctcctacagccttttccttatggct
gtcagcttcctgcagcttcactacagagaagatgcctgcagccccaatgccaacgtgggc
gttctccttatagagttctttgagctctatggacgccacttcaactacctgaagacgggc
atccggatcaaagatggtggtagctatgtggccaaagacgagtttcagaagaacactgac
ctctacaggccctccatgctcttcattgaggaccccctagcaccagataacgacgttggc
cgcagctcatacggtgtgttgcaggtgaagcaggcctttgactatgcctacgtagtgctc
aaccacgccgtatcgcccatcgccaagtactaccccaacaacgagtctgagagtatactt
ggcagaataatccgggtgacccaggaagtggctgaatacagggactggatcaccaagctc
tggggaccacagtctcagaatgaacctgccctgaatggaaatgatgtcacactgttagtg
aagcctcagcagctggacgagtgcaacaacaacctgacggaggaggtgactgcatctcgc
agcaagacctcctccaactcctcctcattagtgtcatcctcatcctccacggtatccagt
tccagcgacgttgattctgacgggacgccctgtaagacagtgaagcagctgcctggacgg
ggctctagcgcccacagagaatcctcaggtggcgtgaccaatcacagaatacagagccac
accaccagcactcctactgacaacaaggggggcaaggccaggttgttccgctcgtccagt
aaaaacacccaccacgtccagcagaactcatccaacatcaagagccacccgagcagcaag
ccacactaccagggcaacagcaagaagaggaaacctcagcagcactcagaggcccaggac
ctctgcagatag
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