Oncorhynchus kisutch (coho salmon): 109881417
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Entry
109881417 CDS
T09179
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oki04990
]
109881417 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
oki04990
]
Other domain-containing proteins
Patched domain-containing proteins
109881417 (ptchd1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
109881417
NCBI-ProteinID:
XP_031692342
Ensembl:
ENSOKIG00005005235
LinkDB
All DBs
Position
LG11:complement(91051270..91140753)
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AA seq
942 aa
AA seq
DB search
MVGVPAVSSRWWERLKTLCPERARRMLRQVLQAGLRSSFQALGRFVASHPVFFASAPVLV
SVLLGASFSRYRVEGNVESLLVPKHSLAKIEGNLVDSLFPVNRSKHTLYSDLQTPGRYGR
VIVTSRRGSILDPLHTDLVLKLHRAVVQLQVPVLGFNYSFSHLCLLDDKNTCIIDDIIRA
LEDSQSARFANRSSLPLRYPITRLADGRMAYIGHQLGGVQAWGAGPAVQGPGGVSGRGQG
VRSARALQLTYYLQARGALTDRVASQWEQAFCGELGRFGAGHPELSLYPFTSSSLRTDFQ
ASSVLARRPLLASVCVCLVLAVGCCSMRDCVRAKPWLGLLALLSIALSGLTAAGILNLTG
TTYNSTYLGVPFILLGHGLFGTFEMLSSWRRTREDQHVKERVASVFSDVMLRYSGATLLH
QVSLGLAASPLTNLEAVRLFCRCAALGVTVGYLYTLSFYATCLVATGYLETGYRHGCFCR
RVPKKGALDTKPRWYRCLMYTRYQDETHSQTHSHTPNSTHTHTPMRPQDSHLLLGCVQRC
YGDWITNTYVKPFMVLLYLVYISFGLMGFLQVSQGSEPSSLVAMDTGTLLYARAQQRYFS
SYSPVIGFYVYESAPYWNTSVQRDLLEYAKGFQRISWLESYLDYLTERNLSTTSQSRESF
TRMLRLSFLRQPQFAHFADDIIFAERDEGEEPEMAASRVFLVAKTTENKREEMSVLLDTL
RRLSLTSRVRFLIFNPSFVYLDRYATAVSSPLRHSLMAVLFLLGLSSLAVVEPLVAVWLS
LTLLSVQFGVLGFMTLWGVELDCVSVLCLISALGHSADCCGPLLATFSSGRGDSRTVWVR
LALERHGVPSLQTLICYTAALLPLAAVRSNLTRSLFRCLVLTAFCSALHALAFLPTLLTF
LPPAKKTGSRQGDRGEGEGLREEVECVEMVDSTRVVDQITTV
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcgtgcccgctgtttcctctcgctggtgggagaggctcaagacgttgtgtcca
gagcgcgctaggaggatgctgcgccaggtgttgcaggcaggcctgaggagctctttccag
gctctgggtcggttcgtggcgagccacccagtcttcttcgcctccgcccccgtactggtg
tctgtcctgctgggggccagcttcagtcggtatagagtggaaggtaacgtggagtccctc
ctggttcctaaacacagtctggcaaagatagaaggaaacctggtggactcactgtttccc
gtcaacagatctaaacacaccctgtactctgacctgcagactccaggtcgttacggtcgt
gttatagtcacctctaggagaggcagcatcctggaccctctacacacagacctagtactc
aagctccatcgtgctgtcgttcagctccaggttccagtgttggggttcaactactctttc
tcccacctctgtcttctcgatgacaagaatacctgcatcatcgatgacatcatccgagcc
ctggaggacagccaatcagctcgctttgctaaccgttcttcccttcctctgcgctaccca
atcacacgtttggctgacgggcggatggcctacattggtcaccagttaggaggggtgcag
gcgtggggggcggggcctgcagtacagggtcctgggggtgtgtctggtcgaggccaggga
gtccggagcgctagggctctgcagctgacctactacctgcaggctcgcggcgccctgaca
gacagggtggctagccaatgggagcaggcgttctgtggcgagctgggacggtttggggcg
ggacaccctgaactgagcttataccccttcacttcatcctctctaaggacagacttccag
gcgtcgtcagtgctggctcggcgccccctgctggccagtgtatgtgtgtgtttggtgtta
gccgtgggctgttgttctatgagggactgtgtgagagctaaaccctggctagggcttttg
gctctgctgtctatcgccctctctggtctcactgctgctggcatccttaacctgactgga
accacttacaactcaacctacctgggggtaccattcatactgctgggtcacggactgttt
ggcacatttgagatgctatcgtcatggagaaggacacgtgaggaccaacatgttaaggag
cgtgtagctagcgtattctctgatgtcatgctgcgttactcaggagctacactgctacat
caggtgtctctgggtctggctgcgtctcctctgactaacctggaggctgtccggctgttc
tgtcgctgcgctgcattgggcgtaaccgttggttacctttacaccttgtccttctacgcc
acctgtctggttgccacaggttacctggagacagggtacagacacgggtgtttctgtcgc
cgcgtccccaagaagggagcgctggacaccaagccacgctggtaccgctgtctcatgtac
acacgctaccaggacgagacacactcacaaactcactcacacacacccaactctacacac
acacacacacctatgcgaccccaggactcacacttgttgctaggctgcgtgcagcgttgc
tatggagactggatcaccaacacctatgtgaagcctttcatggttctgctctacctcgta
tacatctcctttggcctgatgggcttcctacaggtgagccagggctcggagcccagttct
ctggttgctatggatacagggacgttgttgtatgctcgcgcccagcagcgctacttctcc
tcctactctcctgtgattggcttctatgtctatgagagcgccccctattggaacacctcg
gtacagcgagacctgctggagtacgctaaagggttccaacgaatcagctggctggaaagc
tacctggattacctgacagaacggaacctctccactaccagccaatcacgtgaaagcttt
acgcggatgctccgcctctccttccttcgccagccgcaattcgctcattttgccgatgac
atcatcttcgctgagcgcgatgaaggggaggagccagagatggcagcgtcacgtgtcttc
ctggttgccaagacaacagagaacaagagggaggagatgtccgtcctattggacacactg
agacgtctgtctctgacatcacgcgtccgctttctcatcttcaacccctccttcgtctac
ctggacaggtatgctacagcggtgagctctcctctgcgccactccctgatggcggtgttg
ttcctgctgggtctgtcgtctctagcggtggtggagcccctagtggcagtgtggctcagt
ctaaccctcctctctgtccagtttggtgttctgggcttcatgactctgtggggcgtggag
ctcgactgcgtgtctgtgttatgtctgatttcagcactgggtcactctgcagactgctgt
ggtcctctactggccaccttctcctctggccggggggacagccggaccgtgtgggtcaga
ctggcgttggagagacatggcgtcccatctctacagacgttgatctgctacactgcagcg
ctgctccctctggccgccgtccgctccaaccttacacgctcgctgttccgttgcctagtg
ctgacggcattctgttcagcgctccatgccttggccttcctgcccacgctgctcaccttc
ctgccacccgccaagaagacaggaagtagacagggagacagaggggaaggggaggggctt
agagaggaagtggagtgtgtggagatggttgacagcaccagggtggtcgaccagatcacc
accgtctga
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