Oncorhynchus kisutch (coho salmon): 109881487
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Entry
109881487 CDS
T09179
Symbol
synj1
Name
(RefSeq) synaptojanin-1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki00562
Inositol phosphate metabolism
oki01100
Metabolic pathways
oki04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
109881487 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
109881487 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109881487 (synj1)
Enzymes [BR:
oki01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
109881487 (synj1)
Membrane trafficking [BR:
oki04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
109881487 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Herpes_pp85
Motif
Other DBs
NCBI-GeneID:
109881487
NCBI-ProteinID:
XP_031664955
Ensembl:
ENSOKIG00005029425
LinkDB
All DBs
Position
LG29:complement(43010577..43116079)
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AA seq
1732 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVETRNRDECLMFESGAVAVLSAAEKEAIKNTYTKMMDAY
GILGVLRLNLGDSMLHSLVVAAGCSSVGKVQDSEVFRVTSTEFVSLKNDPSDEDRIADVR
KVLNSGNFYFAWSSSGISMDLSLNAHRRIKEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACVISRLSSERAGTRFNVRGANDDGQVANFVETEQVIFLD
DQVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGYEANAPAFERHFSALRRLYGKQVIIN
LLGMKEGEHMLSKAFQSHLKASEHAGAVKMINFDYHQMVKGGKADKLHSVLKPQLNKFLD
ACSFFCYSGEKGVTKSQSGTLRTNCLDCLDRTNSVQAYFALEMLPKQLEDMGLTEKPQLV
ARFQEVFRSMWTVNGDSVSKIYAGTGALDGKAKGGKLKDGARSVTRTIQNNFFDSSKQEA
IDILRLGSTLNSDLADKARALLTTSSLYVTEPILQSASPRVLLGMCQNHQKYTRPKQIRV
SVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPMKAGLPDFQGEELSSQPPDIFAIGFEEMV
ELNAGNIVSASTTNQKLWAAELQKNISRDHKYVLLASEQLVGVCLFVFIRPHHAPYIRDV
AVDTVKTGMGGATGNKGGVAIRMLFHTTSICFVCSHFAAGQSQVKERNDDYNEITRKLTF
PMGRLLYSHDYIFWCGDFNYRISQPNEEVKELIRQQNWEALTAGDQLVDQKNQGLVFRGF
IEGNLDFAPTYKYDLFSDDYDTSEKCRTPAWTDRCLWKRRKWNFDKTAEEMNMVGPVGEA
EEQQQYPWSPGELKYYGRAELKTSDHRPVMAVMDIDVLEVDPDARHQVYKEVIALQGPPD
GTILVSLCSSGPDDYFDDALIDELLDKFAVFGEVILIRFVEEKMWVTFLEGYSALAALSL
SASTVLGKVIDIRLKSSGWIKSLEEEMSVERICGSVPTSASSSLLAEDADMGEDDYDMEG
DVDEEVEDILPQHLQPGAGPGPLSSPSLSPRGSPSHSPTHGEPAAPSRPSRSAPRSAGPP
QGTPVDFQPGAPQALEPKRPPPPRPNAPPARPAPPQRPPPPSGGLSPMPGRRDLGGQKSP
ALARPASAMARRGSEGRVQSGPGGLPRPNMPQRAGVISVTPQARPAHPGAPRPTPEAPGA
PRPTPDTHPGAPRPGPDAQPKPTDLPLGPPPSGPPPVRHVPSPMQPQSAPPAQPPMQAPM
QAQSAPPAQPPMQAPMQPPMQAQSAPPAQPPMQPPMQAPMQPTMQPTMAAPMQPTMQAPM
QPQSAPPAQPPMQAPMQPQMAAPMLPTQAGAGLGATGVVAPQGLSSPKPPPRSRSSHVLP
PETTTTENAPATQINGVNGIQREAQWKPEPFDTLTSDLSASWLNTQSLTRNSSLYSAPTL
PSSLHSTPLSTPQAFDNSSSSTLPPSLTRSLLPPPPVPSRSRSQEALQRGSPNPFLSDPV
PARPNSTNPFTGPLVPQGQRRSLTPDFLAQQKASRPGLDRTMSAFTQPLAPTPASLLSPT
PAPFPAFAPNMTPGAPAPPPSLHRTMSLLGPSTTPLIPAPALPLLTAPSLPPPMLPLALP
LSRPLLPAPPPPPPRAQLWVTFDDDSVLPVPAKAPPAAPTASTSPPSLTQTQFSCSGFDS
DPHWATGSTTLTSTLISRPPPIPARVVPGSSQPPLPARATNNLPFPKDFSER
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaaaggatatcgcatctaccacaagttggacccgcccccgtacagcgtc
atcgtggaaaccaggaacagagacgaatgcctcatgttcgagtcgggcgccgtcgccgtg
ctatcggctgcagagaaggaggccattaagaacacctacaccaagatgatggacgcctat
gggattctgggagtcctacgcctcaacctgggtgattccatgctccacagcttggtagta
gcagcaggctgtagctccgtagggaaggtgcaagactctgaggtgttccgggtcacgtct
acagagtttgtttctctgaagaacgacccgagtgacgaggaccgcatcgctgacgtcagg
aaagtcctgaactctgggaatttttatttcgcttggtcctctagcggcatcagcatggac
ctcagcctcaatgctcaccgccggatcaaagaggacacgacagacaaccgcttcttctgg
aaccagtcccttcatcttcacctaaagcactacggtgtgaactgtgatgactggttgttg
aggttgatgtgcggcggggtggagatcaggacgatctacgcaggtcacaaacaggccaag
gcctgcgtcatctcccgcctcagctcagagagggccgggacgcgcttcaacgtccgaggg
gccaacgatgacggacaggtggccaacttcgtagagactgaacaggtgatcttcctggat
gaccaggtgtcttccttcatccagatccgtggttccatccctctgttctgggagcaacca
ggaatacaggtgggctctcatcgcgtcaagctctccagagggtacgaggccaacgcaccg
gcttttgagagacacttcagtgctctgaggaggctgtatgggaaacaggtgatcatcaac
ctgctcggcatgaaggagggagaacacatgctcagcaaagcattccagagtcacctgaag
gcgtccgaacacgccggagctgtgaagatgattaacttcgactaccatcagatggtgaaa
ggcggcaaagctgacaaactccacagtgtcctcaaacctcagctcaacaagtttctggat
gcctgcagcttcttctgctactctggagagaagggggttaccaagtctcagagtggtacc
ctcaggaccaactgtctagactgtctagacagaaccaacagtgtccaggcctacttcgct
ttggagatgttacctaaacagctagaggacatgggtctgacagagaagccccagctggta
gccaggtttcaggaagtgttcaggtccatgtggacggttaacggagactctgtcagcaag
atctacgctgggactggagccctggatggaaaggctaaggggggtaagttgaaggacggt
gctcgctctgtgaccagaaccatccagaataacttctttgacagttcaaagcaggaggcc
attgacatcctccgactgggctcaacactgaacagtgacctggcagacaaggcccgggcc
ctgctcaccacgtctagtctttacgtcactgagcctatcttacaatcagcctctcccaga
gttctactgggaatgtgtcagaaccaccagaaatacacccgtcccaaacagatcagggtg
tcagtgggtacgtggaacgtcaacgggggaaaacagttccgcagcatcgccttccgcaac
cagaccctcaacgattggctgctggacgctccgatgaaggccgggctcccagacttccag
ggtgaggaactttcaagccaaccaccagatatctttgccatcggctttgaggagatggtg
gagttgaatgctggcaacatcgtcagtgccagtacgaccaatcagaagctgtgggctgca
gagctgcagaagaacatatcccgtgatcataaatacgtcctgctggcatcagagcagcta
gtgggagtctgtctgtttgtcttcatacgccctcaccacgccccctacatcagggacgtt
gccgtggataccgtgaagacggggatgggcggagccacaggtaacaaagggggagtggcc
atccgcatgctgttccatacgaccagtatctgtttcgtctgctcccacttcgctgccggc
caatcacaggtcaaggagaggaacgacgactacaacgagatcacacgcaaactcaccttc
cccatgggtagactgctctactcccacgactacatcttctggtgcggggactttaactac
cgcatcagtcagcccaacgaggaagtgaaggagttaatcagacaacagaactgggaagcc
ctgaccgccggggaccagctggtggaccagaagaaccagggactggtgttccgggggttc
atcgagggcaatttggactttgctcccacctataagtacgacctgttctctgacgactat
gacaccagtgagaagtgtcgtacccccgcctggaccgaccgctgcctatggaagaggagg
aagtggaacttcgacaagactgcggaggagatgaacatggtcggcccagtgggagaagca
gaggaacagcagcagtacccctggagccctggggagctgaaatactacgggagggctgag
ctcaagacctctgatcacaggcctgtgatggcagtgatggatatagatgtcctggaggtg
gatccagatgcccgtcaccaggtgtataaggaggtgatcgccctgcagggtcctcccgac
ggaaccatcctggtctcgctctgttcctccggacctgacgactactttgacgacgcgctc
atcgacgagctgctggacaagttcgctgtgtttggagaggtcatcctcatcaggtttgta
gaggagaagatgtgggtgacgtttctagagggttattctgctctggctgccctgtctctg
agcgcctccacggttctgggtaaggtgatagacatccgtctgaagagttcaggttggatt
aagagtctggaggaggagatgagtgtagagaggatctgtggatctgtccctacttccgcc
agctcctctctgctggccgaggacgctgatatgggagaggatgactacgatatggagggc
gatgtggatgaggaggtggaggatattctcccccaacaccttcagcccggcgcaggccct
gggcccctctcctccccctccctctccccaaggggcagcccttctcactcccccacccac
ggagaaccagctgcccccagcagacccagccgatctgcaccacgctctgctggaccaccg
caagggactccagtggacttccagcctggtgctcctcaggccctggagcctaaacgcccc
cctcctcctcgccccaacgcccccccagcccgacctgctcctcctcaacgccctcctcct
ccatcaggaggcctaagccccatgcccgggagaagagacctgggaggacaaaaaagccct
gcgctcgctagacctgcctcagcgatggccagaaggggcagcgaaggtcgtgtccaatca
ggtcctggaggcctgcccagaccgaacatgcctcagagggctggggtgatcagtgtgacc
ccccaggcgcgtcctgcccacccaggtgctcccagacccaccccagaggcaccgggggct
ccacggcccaccccagacactcaccctggagctcccagacctggccctgacgcccagcct
aaacccaccgacctgcccctgggcccccctccttccggaccccctccagtgagacatgtc
ccctccccaatgcagccccagtctgcccctccagcccagcctcccatgcaggctcccatg
caggcccagtctgcccctccagcccagcctcccatgcaggctcccatgcagcctcccatg
caggcccagtctgcccctccagcccagcctcccatgcagcctcccatgcaggctcccatg
caaccaaccatgcaaccaaccatggctgccccaatgcagccaaccatgcaggctcccatg
cagccccagtctgcccctccagcccagccacccatgcaggctcccatgcagccccaaatg
gctgctccaatgctgcccacacaggccggagcagggctaggggctaccggggttgtggcc
ccccaggggctgtcctcccccaagccccctccccgctcccgttcctctcatgtcctgccc
cctgagaccaccactacagagaatgcccctgcaacccagatcaatggggtgaatggaatc
caaagagaagcacaatggaagcccgaaccctttgacacactcacctctgacctctccgcc
tcttggctcaacacccaatcactgaccaggaactcctccttatactcagctcctaccctc
ccttcatccctccactccacccctctgtccaccccgcaggccttcgacaactcctcttcc
tccaccctccccccttccctcacccggtctctcctcccccctcccccggtcccatctcga
agtaggtcccaggaggccctgcagcggggctctcccaaccccttcctgagtgatccggtc
ccagcccgtcccaacagcaccaaccccttcactggtcctctggtgccgcagggtcagagg
cgctccctgacacctgacttccttgcccagcagaaggcctcaaggcctggtctcgacagg
accatgtctgccttcacccagcccctcgcccctaccccagcctcacttctctcccctacc
ccagccccgttcccagcttttgctcccaacatgacgccaggggcacctgcaccccctcca
tcgctccaccggacaatgtccctgcttggcccatcgacgacccccctcatccctgctcca
gcgctccctctcctgactgctccctctctccctccccctatgctccccctggctcttccg
ctctctcgccctcttcttccagcccctccccctcctccccctcgggcccagctgtgggtg
accttcgatgatgattcagtcctccccgtcccagccaaggctccaccagcagccccaact
gcttccacctcccccccatctctcacccagactcagttttcctgctctggtttcgactct
gacccacactgggccactggctccacaaccttgacctccacattaatctcccggccccct
ccgatcccagccagggtggtcccaggcagcagccagcccccgctcccagcccgagccaca
aacaacctccctttccccaaggacttctctgagagatag
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