Oncorhynchus kisutch (coho salmon): 109881600
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Entry
109881600 CDS
T09179
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
oki04091
]
109881600 (atrn)
Lectins [BR:
oki04091
]
C-Type lectins
Others
109881600 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
EGF_LMN_ATRN
Kelch_5
Kelch_4
CUB
Kelch_6
Kelch_2
PSI
EGF_TEN
NANM
EGF_Teneurin
EGF_laminin
PSI_integrin
EGF_2
TMEM100
DUF4842
DOMON
Motif
Other DBs
NCBI-GeneID:
109881600
NCBI-ProteinID:
XP_031643483
Ensembl:
ENSOKIG00005030243
LinkDB
All DBs
Position
LG14:1029288..1266002
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AA seq
1392 aa
AA seq
DB search
MDGAIWRRACCDAGRSRSLTSGLVEVGGRGSMLQTLLLFSVFGLLFGLPAVTEAKECDKT
CMNGQCNTVTGNCVCSPGWIGDQCQHCGGRFRLTGPSGFLTDGPGNYKYKTKCTWLIEGT
PNSILRLRLDHFATECSWDHLYVYDGDSIYTPLLAAFSGLIVPERYGNETVPEVVSQSGY
ALLHFFSDAAYNLTGFNISYSVNTCPNNCSGRGECLVGNSTGAVYCDCESNWKGEACDLP
YCLSDCGWPDRGRCLQDTKTCRCQPGWQGPDCSVSVPANSSFWQREEYPEPGLARASHKA
VVDQGVMWVIGGYVFNSSDYQMVKAYNLSSHRWLSLNRSVNSVMGRYGHSLALHEGKIFM
YGGKIDSTGNVTSQLWVFHIQNQTWVSLSARAQEQWAVVGHSAHVVPPLLEGGSPVMLVL
FGHCPLYGYISQVQEYNFARNTWRAVVTDGALVQGGYGHSSVFDPSSRAIYIHGGYKAFS
ANKYGLSGDLYKYDVDRSRWTVLKDSGFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAK
CFSSDFMAYDLACDEWSVLSRPDLHHDVNRFGHTAIYSDSVMYVFGGFNSLLLSDILMYT
PASCSSAPNAAVCAATWLGVHCLWNATLGTCVPWDSNPGFLDEQTALASCGTRTYADNDR
CDHYTDCYSCTANTNGCQWCAVQCVSVSSNCTAVTGAIVEYGICPKDNPSYVCNKKTSCK
SCGVDQNCQWEPRNQECISLPENICGENWHLVGNSCLKFITAKDSYDNAKLTCRGHNAVL
ASLTNQKMVDFVLKELQIMSVLVSKYKASVTPWVGLRKINVSYWCWEDMSPFTNTSLQWL
PGEPSDAGFCGYLAEPASSGLKAQTCINPVNGSLCERAANHSAKQCRTACAMRATCAECT
SSSSECMWCSNMRQCVDSNAYVASFPFGQCMEWYTMNSCPPENCSGYRTCGQCLEQPGCG
WCTDPSNTGRGQCIEGSYRGPFQTAVPAPSTLPGPASSPASQPALNISMCPYDTKYNWSF
ILCPACQCNGHSQCVNQSVCEKCEDLTTGRHCESCISGYYGDPTNGGSCQPCKCNGHAGV
CNPNNGKCFCTTKGIKGDRCHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYY
TAINFVATPEEQNRDLVVFINASKNFNLNITWAASFTVGTQTGEEIPIVSRSNIKEFKDS
FSNENFDFRNNPNITFFVYASNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVA
AVVWKIKQSCWASRRREQLLREMQQMASRPFATINVALETDEEPPDLIGGNVKTVPKPIA
LEPCFGNKAAVLSIFVRLPRGTGGIPPPGQSGLTVASALVDVSQQMCLGYKEKSCGLRNR
KQHPSAQPSTCI
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggacggggcgatatggcggagggcctgctgtgatgctggccgcagccggagcctgacc
agcgggctggtggaggttggtggccggggctcgatgctccaaacactgctccttttctcc
gtgttcgggctgctctttggacttcccgctgtcaccgaggcgaaagaatgcgacaaaacg
tgcatgaatgggcaatgcaacacggtaacgggcaactgtgtgtgcagccccggctggatc
ggggaccaatgccaacactgcggaggaaggttcaggttgacgggcccctcagggttcctg
acagatggaccaggaaactataagtacaagaccaagtgcacctggctcatcgagggaacg
cccaacagcatcctcaggctgaggttggaccactttgccacagagtgcagctgggaccac
ctgtatgtgtacgatggtgactctatctacactcctctactggctgccttcagtgggttg
atagttcctgagcgctatggcaacgagacggttccggaagtggtgtcacagtccggttac
gccctcctccacttcttcagcgacgctgcctataacctgaccggcttcaacatctcatat
agtgtgaacacgtgtcctaacaactgttctggccgaggggagtgtctcgttgggaactca
acaggtgctgtatattgtgactgtgaatccaactggaagggcgaggcctgtgatctccct
tactgcctgtcagactgtggttggcctgacaggggacgatgccttcaggacacaaagaca
tgtcgatgccagcctgggtggcaaggtccagactgctctgtgtccgtcccggccaactct
tcattctggcagcgggaagaataccctgagccggggctggccagggcttcccacaaggcc
gtagtggatcagggggtcatgtgggtcatcgggggttatgttttcaactcctcagactac
cagatggtcaaagcgtataacctcagctcccatcgctggctgtctctcaaccgctctgtc
aactccgtcatgggacgatacggacactctctggcactacatgagggaaagatcttcatg
tacggagggaaaatagactctactggcaacgtgaccagccagctgtgggtgttccacatc
cagaaccagacctgggtgtccctctctgcccgagcccaggaacagtgggccgtggtggga
cactctgcccacgtagttccccccctgttggaggggggtagtccagtcatgttggtgctg
ttcggacactgtcctctatacgggtacatcagccaggtgcaggagtacaactttgctagg
aacacgtggcgtgccgtggttaccgatggagccctggtgcagggagggtacggccacagc
agtgtgtttgacccctcctcccgagccatctacatccacggagggtacaaggccttcagc
gctaacaagtacggcctgtctggagacctgtacaagtacgacgtggaccgcagccgatgg
acggttctaaaggacagtgggttcttccggtacctccacacggcggtcatcgttagtgga
accatgctggtgtttgggggaaacacgcacaacgacacgtccatgagccacggagccaag
tgcttctcctcggacttcatggcctatgacctggcatgtgatgagtggtcagtgctgtcc
agaccagacctccaccatgatgtcaaccgcttcggacacacagccatctacagtgacagt
gtaatgtacgtgttcggggggtttaacagtctcctgctgagtgacattctgatgtatacg
ccagccagctgctccagcgctcccaacgctgccgtctgtgcagcaacctggctgggagtt
cactgcctctggaatgctaccctagggacctgcgtgccttgggactcgaaccctggattc
ctggatgagcagaccgccttggcctcctgtggaaccagaacatatgctgacaacgatcgt
tgtgaccactacacggactgctacagctgtacagccaatactaacggctgccagtggtgt
gctgttcagtgtgtctccgtgagctccaactgcacggccgtcacgggggccatagtggag
tatggtatctgccccaaagacaacccgtcttatgtctgcaacaagaagaccagctgtaag
agctgtggtgtggaccagaactgccagtgggaacccagaaaccaggagtgtatctctcta
cctgagaatatatgtggtgagaactggcacctggttggtaactcatgtctgaagttcatc
acagccaaggactcgtatgataatgcaaagctgacctgtcggggtcacaacgccgtcctg
gcctcactgaccaatcaaaagatggtggacttcgtcctcaaggagctgcagatcatgagc
gttctggtgagcaagtacaaggcctcggtgacgccgtgggtggggctgaggaagatcaac
gtctcctattggtgctgggaagacatgtcacccttcacgaacacctccctccagtggttg
ccgggggaacccagcgacgccggtttctgtggttacctagcagagccggcttccagcggt
cttaaggcccagacctgcatcaaccctgttaacgggagtctgtgtgaacgagcagccaat
cacagtgccaagcagtgtcggacggcgtgcgccatgcgggctacgtgtgctgagtgtacc
agcagcagctctgagtgtatgtggtgcagcaacatgaggcagtgtgtggactctaatgca
tacgtagcctccttccccttcggacagtgtatggagtggtacactatgaacagctgtcca
cctgagaactgttctgggtacaggacgtgtggccagtgtctggagcagccgggctgtggc
tggtgtacagaccccagtaatactgggcgtggccagtgcatcgaggggtcctatcggggg
ccgttccagaccgctgtccccgccccctccaccctgcctggtccagcctctagtcccgcc
tcccagccggctctcaacatcagcatgtgtccttacgataccaagtacaactggagcttt
atactctgtccagcgtgccagtgtaatggccacagtcagtgtgtgaatcagagtgtatgt
gagaagtgtgaggacctgacaacaggacgccactgtgagagctgcatctctggttactat
ggagaccccaccaacgggggcagctgccaaccgtgtaagtgtaatggccatgccggtgtg
tgtaaccctaacaacgggaagtgtttctgcaccaccaagggcatcaaaggagaccgctgt
cacctgtgtgaggtggagaaccgttaccaaggaaaccctctgaaaggaacctgttactac
accctgctgatagactaccagttcaccttcagtctgtctcaggaggacgaccgctactac
accgccatcaactttgtagccacacccgaggagcagaatcgtgatctggttgtgttcatc
aacgcctccaagaacttcaacctcaacatcacctgggccgctagcttcacagtaggtacc
caaacgggcgaggagatccccattgtctccaggagtaacatcaaggagtttaaagacagt
ttctccaatgagaactttgacttccgcaacaacccaaacatcaccttcttcgtctatgcc
agcaacttcacctggcccatcaagatacaaattgccttctctcagcacagtaacttcatg
gatctggtgcagttcttcgtcacgtttttcagctgtttcctgtccctcctcctggttgca
gcagtcgtctggaagatcaaacagagctgctgggcgtcacggcgacgcgagcaactcctc
cgtgagatgcagcagatggctagccggccgttcgccaccatcaacgttgccttggaaacg
gacgaggagccgcccgacctgattggtggaaacgtcaagacggtgcccaagcccatcgcc
ctggagccgtgttttgggaacaaggctgctgtcctctccatctttgtccgtttacccaga
ggcaccgggggcatccccccgcccggtcagtctggtctaacggtggcctcagccctggtg
gatgtgtctcagcagatgtgtcttggttacaaagagaagtcatgtggtctgaggaacagg
aagcaacatccctccgcacagccctccacctgtatctga
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