Oncorhynchus kisutch (coho salmon): 109881651
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Entry
109881651 CDS
T09179
Name
(RefSeq) terminal nucleotidyltransferase 4B-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109881651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109881651
03016 Transfer RNA biogenesis [BR:
oki03016
]
109881651
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109881651
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109881651
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109881651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
Motif
Other DBs
NCBI-GeneID:
109881651
NCBI-ProteinID:
XP_031670358
Ensembl:
ENSOKIG00005026275
LinkDB
All DBs
Position
LG3:73714887..73739098
Genome browser
AA seq
645 aa
AA seq
DB search
MDPRIAWFQPEQRGPANSLWMQIWETTQGLGNLYFNNNCNTGSLSSTSSLSQKSNINGTL
GNVISSKNGAVTNSEPRNKGMSNSTKDRDVVEQRDFIPLEANNNHNNRSSLGRGSGGGQV
GSGVSGHPNKRKRDNKASTYGFNSSLETGGCGYTGTPWKVKNYSEGILGLHEEINDFYKH
MSPREEEERMRMEVVDRIERVIKDLWPTADVQVFGSFSTGLYLPTSDIDLVVFGNWENLP
LWTLEEALRKKNVTDENSIKVLDKATVPIIKLTDFRTEVKVDISFNVKNGVKAALLIKDY
KKKYPVLPKLVLVLKQFLLQRDLNEVFTGGIGSYSLFLMAVSFLQLHYREDACSPNANVG
VLLIEFFELYGRHFNYLKTGIRIKDGGSYVAKDEVQKSTDLYRPSMLFIEDPLAPDNDVG
RSSYGVLQVKQAFDYAYIVLNHAVSPIAKYYPNNESESILGRIIRVTQEVAEYRDWITKL
WGPQSQNEPALNGNDVTLLVKPQQLDECNNNLTEEVTASRSKTSSNSSSLVSSSSSTVSS
SSDVDSDGTPCKTVKQLPGRGSSAHRESSGGVTNHRTQRHTTSTPTDNKGGKARLFRSSS
KNTHHVQQNSSSSNIKSHPSSKPHYQGNSKKRKPQQHSEAQDLCR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagaatcgcttggtttcagccagaacaacgtggaccagccaacagcctgtgg
atgcagatttgggaaacaacacaaggtctggggaatctgtacttcaataacaactgtaac
acgggtagtttgtcaagcacgtcaagcctcagtcagaaatcgaacatcaacgggacattg
ggtaacgtaatctctagcaagaacggagctgtcactaacagcgaacccaggaacaaggga
atgtccaactcaacgaaagacagagatgtagtcgaacaacgagactttattccgttggaa
gctaataacaaccacaacaaccgttcatcgttggggaggggcagcggaggggggcaagtg
ggctctggggtctcaggacaccccaacaaaaggaaaagagacaacaaggctagcacttat
ggattcaacagtagcctcgagaccggaggctgtggttacacgggaacaccatggaaagtc
aagaactactctgaaggaatcttggggctccatgaggagatcaatgacttctacaagcac
atgtctcctcgggaagaggaggagaggatgaggatggaggtggtggacaggatcgagagg
gtcatcaaagacctgtggcccactgctgatgttcaagtgtttgggagtttcagcacgggc
ctctatctgccaaccagtgacatcgatctggtggtgtttgggaactgggaaaacctgccc
ctttggaccctggaagaggccctgcggaagaaaaacgtgactgacgagaactccatcaaa
gtgctggacaaggccacggtacccatcatcaagctgacagacttccgcacagaggtgaag
gtggacatcagcttcaatgtgaagaacggagttaaagctgcccttctcatcaaagactac
aaaaagaaatacccagtgcttccgaagttggttctggtgctgaagcagttcctgctccag
agggatctgaatgaggttttcactggagggatcggctcctacagtcttttccttatggct
gtcagcttcctgcagcttcactacagagaagatgcgtgcagccccaatgccaacgtgggc
gttctccttatagagttctttgagctctatgggcgccacttcaactacctgaagacgggc
atccggatcaaagatggcggcagctatgtggccaaagacgaggttcagaagagcactgac
ctctacaggccctccatgctcttcattgaggaccccctagcaccagataacgacgttggc
cgcagctcatacggtgtgttgcaggtgaagcaggcctttgactatgcctacatagtgctc
aaccacgccgtatcgcccatcgccaagtactaccccaacaacgagtctgagagtatactt
ggcagaataatccgggtgacccaggaagtagctgaatacagggactggatcaccaagctc
tggggaccacagtctcagaatgaacctgccctgaatggaaatgatgtcacactgttggtg
aagcctcagcagctggacgagtgcaacaacaacctgacggaggaggtgactgcatctcgc
agcaagacctcctccaactcctcctcattagtgtcatcctcatcctccacggtatccagt
tccagcgacgttgattctgacgggacgccctgtaagacagtgaagcaactgcctgggcgg
ggctccagcgcccacagagaatcctcaggtggcgtgaccaatcatagaacacagaggcac
accaccagcactcctactgacaacaaggggggcaaggccaggttgttccgctcgtccagt
aaaaacacccaccacgtccagcagaactcgtcctcatccaacatcaagagccacccgagc
agcaagccacactaccagggcaacagcaagaagaggaaacctcagcagcactcagaggcc
caggacctctgcagatag
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