Oncorhynchus kisutch (coho salmon): 109881674
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Entry
109881674 CDS
T09179
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04137
Mitophagy - animal
oki04144
Endocytosis
oki04145
Phagosome
oki04148
Efferocytosis
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109881674
04145 Phagosome
109881674
04137 Mitophagy - animal
109881674
04148 Efferocytosis
109881674
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109881674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109881674
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109881674
04031 GTP-binding proteins [BR:
oki04031
]
109881674
Membrane trafficking [BR:
oki04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
109881674
Endosome - Lysosome transport
109881674
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109881674
Exosomal proteins of other body fluids (saliva and urine)
109881674
Exosomal proteins of colorectal cancer cells
109881674
Exosomal proteins of melanoma cells
109881674
GTP-binding proteins [BR:
oki04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
109881674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
109881674
NCBI-ProteinID:
XP_020329376
LinkDB
All DBs
Position
LG26:38349996..38358987
Genome browser
AA seq
218 aa
AA seq
DB search
MATRGSGRPNCMLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYSEDTGLLFMETSAKTAMNVNDLFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAHNTRSCCGGGGGN
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagagggagtggccggcccaactgcatgctgccccagacaaagatatgccag
tttaaactggtgttgctgggagacatggctgtgggcaagtccagcctggtgctgcgcttc
gtcaagggacagtttgatgagttccaggagaccaccattggagctgcattcctggcccag
tctgtgtgtctagacgacaccactgtgaagtttgagatctgggacacggcgggacaggag
cgctaccacagtctggctcccatgtactaccgcggggcacaggctgctattgtggtcttt
gacatcaccaagccggagacgtttgagcgagccaaagcctgggtgaaggagctacagagg
caggctagccccaacattgtcatcgctttggcagggaacaaggctgacctggctgagaag
agactagtggagtacgaggaggcccagacctattctgaagacactgggcttctcttcatg
gagacctctgccaagacggccatgaatgtcaacgatctgttcctggccattgccaaaaag
atgccaaaaacagacacccagaaccctacacacgcagcacgacacagaggagtgaaccta
caggaccctgatgcccacaacacccgatcctgctgtggaggaggaggagggaactag
DBGET
integrated database retrieval system