KEGG   Oncorhynchus kisutch (coho salmon): 109881684
Entry
109881684         CDS       T09179                                 
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109881684 (exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109881684 (exosc5)
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     109881684 (exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 109881684
NCBI-ProteinID: XP_031651196
LinkDB
Position
LG18:4532551..4542237
AA seq 219 aa
MDVCASSSPTLREFGCEQNLLSRPDGSSSFVQGDTSVLAGVYGPAEVKVSKEIYDRATLE
VVMQPKVGLPGVRERAREQCVRETCEASLLSTLHPRSSLTLVLQVVHDDGSLLSCFLNSA
CMALMDAGLPMSCLFAGVTCAIDTDGQVITDPNAAQEKESRALMTFAIDSTERRVMMSST
RGSFTVHELQQCIAVSQKASDKIFQFYRDSVRRRYSKTL
NT seq 660 nt   +upstreamnt  +downstreamnt
atggatgtgtgtgcatcttcgagtcctactttgagggagtttggctgcgaacagaattta
ctatcacgacctgatggatcgtcgtccttcgtccaaggagacaccagtgtattagctgga
gtgtatggcccggcggaggtgaaggtcagtaaggagatctatgacagagctaccctggag
gtggtgatgcagcccaaagtgggactaccaggtgtcagagagcgagccagagaacagtgt
gtgagggaaacatgcgaggcgtctcttctctccacccttcatccacgctcctccctcact
ctcgtcctacaagtggtccatgatgacggttcactgttgtcctgctttctgaactcagcc
tgtatggccctgatggacgcaggcctgcctatgagctgcctgttcgctggggtcacctgt
gccatcgatacagatggccaggtcattaccgaccccaatgcagcacaggagaaggaaagt
cgagctttgatgaccttcgctattgacagtaccgagcgcagagtgatgatgtcatccacc
agagggtcttttacagttcatgagctgcaacagtgtatagctgtcagtcagaaagcatcg
gacaagattttccagttctacagagattctgtcagacgaagatattccaagacactctga

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