KEGG   Oncorhynchus kisutch (coho salmon): 109881805
Entry
109881805         CDS       T09179                                 
Name
(RefSeq) cullin-4A-like isoform X1
  KO
K10609  cullin 4
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03420  Nucleotide excision repair
oki04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109881805
  09124 Replication and repair
   03420 Nucleotide excision repair
    109881805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109881805
   03400 DNA repair and recombination proteins [BR:oki03400]
    109881805
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109881805
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     109881805
DNA repair and recombination proteins [BR:oki03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109881805
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109881805
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109881805
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 HAT_PRP39_N
Other DBs
NCBI-GeneID: 109881805
NCBI-ProteinID: XP_031669255
Ensembl: ENSOKIG00005046293
LinkDB
Position
Unknown
AA seq 757 aa
MAEDIRQDKKANFSALTEHNNNGVTKISGLASNKTGASKKLVIKNFKDRPKLADNYTEDT
WLKLRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVQAQIHQFR
EESLDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRNHI
VSDGAVQKRTVDGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFEERFLMETDRL
YAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQSTQKPLISNVEKQLLGEHMTAI
LQKGLSILLDGNRVMELALLYQLFSKVKGGLPTLLQHWRDYIKSFGGEIVGTPEKDKDMV
QDLLDFKDKMDNVAQGCFNRNESFINAMKEAFEAFINNRPNKPAELIAKYVDCKLRAGNK
EATEEEMERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDVMIQFKQYTQNQSEPSQLELTVNILTMGYWPSYTPMEVH
LPPEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMF
NEGEEFSVEEIKSATGIEEGELRRTLQSLACGKARVLNKSPRGKDIEDGDRFNFNNDFRH
KLFRIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLGHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKESPNQYHYVA
NT seq 2274 nt   +upstreamnt  +downstreamnt
atggcagaagacatacgacaggacaagaaagccaacttctctgctctgacggagcacaac
aacaacggagtgacaaagatttctggcctggcctccaacaaaactggcgcctccaagaaa
ttagtcattaaaaatttcaaagacaggccaaagctagcggacaactacactgaggacacc
tggctgaagctgagggatgcggtaggagccatccagaacagcacctccatcaagtacaac
ctagaggaactctaccaggcggtggagaacctgtgttcctataaagtctcccccacactg
tacaagcagctccgtcaggtctgtgaggaccatgtccaggcccagatacatcagttcaga
gaagagtccctggacagcctgtctttcctgaagaggatgaaccgatgttggcaggaccac
tgcagacagacgatcatgatccggagtatctttctgttcctggatcgtacctacgtgctc
cagaactccctgctcccctccatctgggataccgggctggaactcttccggaaccacatc
gtgagcgacggggctgtccagaagcgcacggtcgacgggatcctggaacagatcgaacgc
gaacgcaacggagagacagtggaccgcagccttctccgcagcctactgggcatgctctca
gacctgcaggtgtataaagagtcgtttgaggagcgttttttgatggagactgacagactg
tacgctgcagagggacagaggctgatgcaggaacgagacgtgccggagtacctgcatcat
gtggctcgtcggttggaagaagagaacgatcgtgtcatcagctacctcgaccagagcact
cagaagccacttatctctaatgtagagaagcagctgcttggagaacacatgacggccatc
ttacagaaaggtctcagtattctgttagacggtaaccgggtgatggagctggctctgctt
taccagctcttcagtaaggtgaagggaggactccccactctgctgcagcactggagagac
tacatcaagagttttggtggtgagattgtgggcaccccggagaaggataaggacatggtt
caagacctgttggactttaaggataagatggacaacgtggcccagggctgtttcaacaga
aacgagagcttcatcaacgctatgaaggaggcctttgaagctttcatcaacaacagaccc
aacaaacctgctgaactcatcgcgaagtacgtggactgtaagttgagggcgggcaacaag
gaagctaccgaggaggagatggagagaattctggacaagatcatgatcatcttccgcttc
atccacgggaaggatgtgttcgaggccttttataagaaggacctggccaaacgcctgctg
gtggggaagagtgcctccgtggacgctgagaagtccatgctgtccaaactcaaacacgag
tgtggagcggccttcaccagtaagctggaggggatgtttaaggacatggagctctccaaa
gacgttatgatccagttcaagcagtacacccagaaccagagtgagcccagccagctggag
ctgacggtcaacatcctcaccatgggctactggccctcctacactcctatggaggtccac
ctgccccctgagatggtgaagctccaggaggtattcaagctgttctatctggggaaacac
agtggcaggaagctccagtggcagcccaccctgggccatgctgttctgaagactgagttt
aaagagggtaagaaggagctgcaggtgtctctgttccagacgttggtgctgttgatgttc
aatgagggggaggagttcagcgtggaggagatcaaatcagccactggcatagaggagggt
gagttgaggcgtaccctgcagtctctggcctgtgggaaggcgcgcgtcctcaataagagt
ccccgggggaaggacatagaagacggagaccgcttcaacttcaacaacgacttcagacac
aaactgttccgcatcaagatcaaccagattcagatgaaggaaacggtagaggagcaggtg
agcaccacagagcgtgtgtttcaggacagacagtaccagatcgacgcggccgttgtccgc
atcatgaagatgaggaaaaccctgggccacaacctgttggtgtcagaactatacaaccag
ctcaagttccccgtcaagcctggagacctgaagaagcggattgagtcgctgattgacaga
gactacatggagagagacaaggagagtcccaaccagtaccactatgtggcctga

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