KEGG   Oncorhynchus kisutch (coho salmon): 109881839
Entry
109881839         CDS       T09179                                 
Symbol
atl1
Name
(RefSeq) atlastin-1 isoform X1
  KO
K17339  atlastin [EC:3.6.5.-]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109881839 (atl1)
Membrane trafficking [BR:oki04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    109881839 (atl1)
 Autophagy
  ER-phagy
   ER-phagy recepters
    109881839 (atl1)
SSDB
Motif
Pfam: GBP GBP_C FA_desaturase DUF2207_C
Other DBs
NCBI-GeneID: 109881839
NCBI-ProteinID: XP_031685158
Ensembl: ENSOKIG00005010550
UniProt: A0A8C7E145
LinkDB
Position
LG7:complement(52187932..52221289)
AA seq 564 aa
MARNREDRDSWGSFTDKATYDWSSEEEEPDGSARPIQVLVVKDDHTFELDEAALSRILLA
EEVKNREVVAISVAGAFRKGKSFLMDFMLRYMYSQASEEWLGEAEEPLTGFSWRGGSERE
TTGIQIWSEVFLVDKPDGRKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNIS
QNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFGYGQEGGMKFLEKR
LKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPNFDGRLKEIDREFINNLQV
LVPWLLSPRNLDVKEINGSNITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNLAA
VAAARDLYNKKMEQVCGGDRPFLAPAELQARQSDIREEALQVFRGVKKMGGEEFSRRYLL
QLEGEVDEVFVQYIKHNDSKNIFHAARTPATLFVVIFSMYVVAGITGFVGVDIIASVCNM
ILGLALITLCTWAYIRYSGEYRELGQVIDQVAGALWDQGSTNEALYKLYTAAASHRHLYH
HAFPGPQAPGETSDTHQEPTRKRN
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggcgagaaaccgtgaagacagagacagctgggggtccttcacagacaaagccacctac
gactggagctcggaggaggaggagcctgatggaagtgcgcggcccatccaggtgctggtt
gtcaaggacgaccacaccttcgagctggacgaggcggcgctgagccggatcctattggcc
gaagaggtcaagaacagggaagtagtggccatatctgtggctggggcgttccgcaagggc
aagtcattcctcatggacttcatgctgcgttacatgtacagccaggcatctgaagagtgg
ctgggggaggcagaggagcctctgactgggttctcctggaggggtggatctgagagagag
accactgggattcagatctggagcgaagtatttctggtggacaagccagatggacgcaag
gtggctgttctactgatggatactcagggcacattcgacagccagtcgacgttgagggat
tcagccaccgtgttcgcactaagcaccatgatcagctccatgcaggtgtacaacatctcc
cagaatgtccaggaggatgatcttcaacacttgcagctcttcactgagtatggtagactg
gccatggaggagacattcctcaagccattccagtccatgatattcctcgtccgggattgg
agtttcccttacgagtttggctatggacaggaaggaggcatgaagttcctggagaagagg
ctcaagatctcagagaaccaacatgaggagctgcagaacgttcgtaaacacatccactcc
tgcttcaccaacatctcctgcttcctgatgccccaccccggactcaaagtggccaccaac
cccaacttcgacggcagactcaaagagatcgaccgtgagttcatcaacaacctgcaggtg
ctggtcccgtggctgctgagtcccaggaacctggatgtcaaggagatcaacggcagcaac
atcacctgcagaggcctgctggagtacttcaaggcatacatcaaaatataccagggtgag
gagctgccacaccctaagtccatgctgcaggccacagcggaggccaacaacctggcagca
gtggcagcagccagggacctgtacaacaagaagatggagcaggtgtgtggtggggaccgg
cccttcctggccccggcagagctccaggccagacagagtgacatcagagaggaagccctg
caggtgtttcggggggtgaagaagatgggaggggaggagttcagccggcggtacctgcta
cagctggagggagaagtggatgaggtgtttgttcaatacatcaaacacaacgactccaag
aacatcttccacgccgcccgcaccccggccacgctgttcgtggtcatcttcagcatgtac
gtggtggcgggcatcacaggcttcgtgggggtggacatcatcgccagcgtgtgtaatatg
attctgggcctggcgttgatcaccctgtgtacctgggcttacatacgctactctggggag
taccgagagctgggtcaggtcattgaccaggtggctggagccctctgggaccagggaagc
acaaatgaggctctatataagctgtatactgctgcagccagtcacaggcacctgtaccac
catgcgttccctggcccccaggcccctggagagacgagcgatacccaccaggaacccacc
aggaagaggaactga

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