Oncorhynchus kisutch (coho salmon): 109881839
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Entry
109881839 CDS
T09179
Symbol
atl1
Name
(RefSeq) atlastin-1 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109881839 (atl1)
Membrane trafficking [BR:
oki04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109881839 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
109881839 (atl1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
109881839
NCBI-ProteinID:
XP_031685158
Ensembl:
ENSOKIG00005010550
UniProt:
A0A8C7E145
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Position
LG7:complement(52187932..52221289)
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AA seq
564 aa
AA seq
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MARNREDRDSWGSFTDKATYDWSSEEEEPDGSARPIQVLVVKDDHTFELDEAALSRILLA
EEVKNREVVAISVAGAFRKGKSFLMDFMLRYMYSQASEEWLGEAEEPLTGFSWRGGSERE
TTGIQIWSEVFLVDKPDGRKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNIS
QNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFGYGQEGGMKFLEKR
LKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPNFDGRLKEIDREFINNLQV
LVPWLLSPRNLDVKEINGSNITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNLAA
VAAARDLYNKKMEQVCGGDRPFLAPAELQARQSDIREEALQVFRGVKKMGGEEFSRRYLL
QLEGEVDEVFVQYIKHNDSKNIFHAARTPATLFVVIFSMYVVAGITGFVGVDIIASVCNM
ILGLALITLCTWAYIRYSGEYRELGQVIDQVAGALWDQGSTNEALYKLYTAAASHRHLYH
HAFPGPQAPGETSDTHQEPTRKRN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaaccgtgaagacagagacagctgggggtccttcacagacaaagccacctac
gactggagctcggaggaggaggagcctgatggaagtgcgcggcccatccaggtgctggtt
gtcaaggacgaccacaccttcgagctggacgaggcggcgctgagccggatcctattggcc
gaagaggtcaagaacagggaagtagtggccatatctgtggctggggcgttccgcaagggc
aagtcattcctcatggacttcatgctgcgttacatgtacagccaggcatctgaagagtgg
ctgggggaggcagaggagcctctgactgggttctcctggaggggtggatctgagagagag
accactgggattcagatctggagcgaagtatttctggtggacaagccagatggacgcaag
gtggctgttctactgatggatactcagggcacattcgacagccagtcgacgttgagggat
tcagccaccgtgttcgcactaagcaccatgatcagctccatgcaggtgtacaacatctcc
cagaatgtccaggaggatgatcttcaacacttgcagctcttcactgagtatggtagactg
gccatggaggagacattcctcaagccattccagtccatgatattcctcgtccgggattgg
agtttcccttacgagtttggctatggacaggaaggaggcatgaagttcctggagaagagg
ctcaagatctcagagaaccaacatgaggagctgcagaacgttcgtaaacacatccactcc
tgcttcaccaacatctcctgcttcctgatgccccaccccggactcaaagtggccaccaac
cccaacttcgacggcagactcaaagagatcgaccgtgagttcatcaacaacctgcaggtg
ctggtcccgtggctgctgagtcccaggaacctggatgtcaaggagatcaacggcagcaac
atcacctgcagaggcctgctggagtacttcaaggcatacatcaaaatataccagggtgag
gagctgccacaccctaagtccatgctgcaggccacagcggaggccaacaacctggcagca
gtggcagcagccagggacctgtacaacaagaagatggagcaggtgtgtggtggggaccgg
cccttcctggccccggcagagctccaggccagacagagtgacatcagagaggaagccctg
caggtgtttcggggggtgaagaagatgggaggggaggagttcagccggcggtacctgcta
cagctggagggagaagtggatgaggtgtttgttcaatacatcaaacacaacgactccaag
aacatcttccacgccgcccgcaccccggccacgctgttcgtggtcatcttcagcatgtac
gtggtggcgggcatcacaggcttcgtgggggtggacatcatcgccagcgtgtgtaatatg
attctgggcctggcgttgatcaccctgtgtacctgggcttacatacgctactctggggag
taccgagagctgggtcaggtcattgaccaggtggctggagccctctgggaccagggaagc
acaaatgaggctctatataagctgtatactgctgcagccagtcacaggcacctgtaccac
catgcgttccctggcccccaggcccctggagagacgagcgatacccaccaggaacccacc
aggaagaggaactga
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