Oncorhynchus kisutch (coho salmon): 109881845
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Entry
109881845 CDS
T09179
Name
(RefSeq) armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1
KO
K28154
splicing regulator ARVCF
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
109881845
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109881845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
Arm_2
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
109881845
NCBI-ProteinID:
XP_031660982
Ensembl:
ENSOKIG00005000352
LinkDB
All DBs
Position
LG3:35784008..36019985
Genome browser
AA seq
1043 aa
AA seq
DB search
MEDYEVCSAASILASVKEQEARFERLTRALEEERRNVSLQLERSNITADRLGGTGPNANL
PPNSQPLAWQQVVMQEQSPSNQTSLAMMQEPQEMVEETVTIEEDPGTPTSHVSVVTSDDG
TTRRTETKDMSTNLKVTKMVKTVTTRTVRQVPLGPDGLPLPEGSSPLGSYTDSIDRRYLK
NGERYITTPQATSTLTRSYNNYNDSYTDTLPPDAGGSHYGGRHYGLHDGYGIGDVTDNYG
SLSRGVNFRPPRYPYAMANSYRTENSYGTLPIRKDDYGHVAQPQVPMGSSSVDLNRSQPE
RFQPEPYGLEDDRRSLGPEEEEPYDLDPDYSTASRRQGTLPGTNRGRTMREPLRDGPRVR
GYDDPIEAELVDERHPYIHGMYAAPLAQPERGSMASLDRLAGRRSPSIDSIRKDPRWRDP
DLQEVIAMLGHPIDPVKSNAAAYLQHLCYENDKIKKDVRQLKGIPVLAGLLDHPKAEVHR
KACGALRNISYGKDHDNKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLK
MVIINHGLQTMTNEVIIPHSGWEHEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARR
RLRECEGLVDALLHALQSAVGKKDMDNKSVENCVCIMRNLSYHVHKEIPGAEKFTDPSVL
QAPGSVGPQRKKKEDAGCFGGKKAKEEWFNQGRKNGENTKSYDTLDLPKRTEPTKGFELL
YQPEVVRLYLSLLTESQNYNTLEAAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELL
RSDADKVVRAVAIALRNLSIDRRNKDLIGSYAMRDLVSNLPSGQQRPAKNLEEDTVVAIL
NTIHEIVTDSSENARSLIQAQAIEKLVAINKTSQSPRENKAASHVLQTVWSYKDLRNALT
KEGWNKSHFQSTASGAPKAAKNGKPGYDDTTLPLMEKNQGQSVTAGETGDPPGLAYCGEL
STKKNGSGDMIPMDELGPDGYSTIDQRDKDCKYKSSGDGSVDLTEREPLKNETNTKHYVR
SNRPAVNLVDACDVKPQPVDSWV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggaggactatgaggtgtgctcggccgccagtattctggcttcggtgaaagagcaggag
gcgcgtttcgagcgtctgacccgggcgctggaggaggagcgacgcaacgtctccctgcag
ctggagcgttccaacataacagccgacaggctcggagggactgggcctaatgctaacctg
ccacccaacagccaacccctggcctggcagcaggtggtgatgcaggagcagagccccagt
aatcagacgtctctggccatgatgcaggagccccaggagatggtggaggagacggtcacc
attgaggaggaccctggcacgcccacctcccacgtttccgtagtcacctccgacgacggc
accacgcgacgcaccgaaaccaaggatatgtcaactaacctgaaggtgacgaagatggtg
aagacggtgaccacgcggacggttcgacaggtgcccctgggccccgacggcctgccccta
cctgagggctcctccccgctgggcagctacacagactccatcgaccggcgctacctgaag
aacggggagcgctatatcaccacgccgcaggccacctccacgctcacgcgctcctacaac
aactacaacgactcctacaccgacacgctcccccccgatgccggcgggagccattatggt
gggcgccactatggcctccacgacggctacgggattggagacgtgacagacaactacggc
agcctgtcgcgtggcgtcaacttccggccgccccgctatccttacgccatggctaacagc
taccggacggagaacagctacgggaccttacccattcgtaaggatgactacggccacgtg
gcccagcctcaggtgcccatgggcagcagcagtgtggacctgaaccggtcccagccagaa
cgcttccagccagagccctacggactagaggatgaccgccgcagcctgggccctgaggag
gaggagccctatgacctggaccctgactactccaccgccagccggcggcaaggcacgctg
cctggcaccaaccgcggcaggaccatgagagagccactccgtgacgggccacgtgtcagg
gggtacgatgaccccatcgaggcagagctggttgacgagcgacacccctacatccatggc
atgtacgcggcccccctggcccagcccgagagggggagcatggccagcctggaccgcctg
gctggccgccgctcgccctccatagacagcatccgcaaggacccgcgctggcgtgaccct
gacctgcaagaggtcatcgccatgctgggccaccctatcgacccggtcaagtccaacgcc
gccgcctacctgcagcacctgtgctacgagaacgacaagatcaagaaggatgtgcgccag
ctgaaggggatccctgtgctggcagggttgctggaccaccccaaggctgaggtccaccgc
aaggcctgtggagccctgaggaacatctcctacggcaaggaccacgacaacaaggtggcc
atcaagaactgcgatggtatcccagccctcatccgcctgctgaggaagaccaacgacatg
gaggtccgtgagctcatcacagggaccctgtggaacctgtcttcctatgagcctctgaag
atggtgattataaaccacgggcttcagactatgaccaacgaggtcatcatcccccactca
ggctgggagcacgagcccaacgaggactccaagccccgcgacgcagagtggaccaccgtc
ttcaagaacacctctggttgtctgaggaacgtgagttcggacggggccgaggcgaggcgc
aggctgagggagtgtgaggggctggtggacgctctgcttcacgccctgcagtcagctgtg
gggaagaaagacatggacaacaagtctgtggagaactgtgtgtgtatcatgaggaacctg
tcctaccacgttcacaaggagatcccaggggccgagaagttcacagacccatcagtgctg
caggccccgggctctgtgggccctcagaggaagaagaaggaagacgcaggctgcttcgga
gggaagaaggccaaagaggagtggtttaatcaaggcaggaaaaacggagagaataccaaa
agctacgacacgctggatctccccaaacgcactgaacccacaaaaggttttgagctgctg
taccagccagaggtagtgaggctgtacctgtctctgctcactgagagccagaactacaac
actctggaggctgcagcaggggccctgcagaacctcagtgccggacagtggacctggtcc
aactacatacgagccactgtgaggaaggagaagggtcttcccatcctggtggagctgctg
cgttctgatgctgacaaggtggtccgagccgtggccatcgccctgcgtaacctctccatc
gaccgccgcaacaaagacctgatcgggagctatgccatgagggacctggtgagtaacctg
cccagtggtcagcagcggccagctaagaacctggaggaagacacagtggtggccatcctc
aacaccatccacgagatcgtgacggacagctccgagaacgcacgctccctcatccaggcc
caggccatcgagaaactggtggccatcaacaagacaagtcaatcaccacgtgagaacaag
gctgcctcccacgtgctgcagacggtgtggagctacaaggacctgaggaacgccctgacc
aaggaaggatggaataagagccacttccagtctacagcaagcggcgcccctaaagcagcc
aagaatggcaaaccaggctacgacgacactaccctgcccctgatggagaagaaccaaggt
cagtctgtgacggcaggcgagactggggatcctccgggcctggcctactgtggtgaactg
agcaccaagaaaaatggaagtggtgatatgatacctatggacgagcttggtccagatggc
tactccaccatcgaccagagagacaaggactgcaagtacaagagtagtggcgacgggtca
gtggacctgacagaacgggagccattgaagaatgagacaaatacgaaacactatgtcagg
agtaacaggcctgcagtcaatctggtggatgcttgtgacgttaaacctcagcctgttgac
tcctgggtctaa
DBGET
integrated database retrieval system
