KEGG   Oncorhynchus kisutch (coho salmon): 109881888
Entry
109881888         CDS       T09179                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase rnf213-alpha
  KO
K22754  E3 ubiquitin-protein ligase RNF213 [EC:2.3.2.27]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:oki00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oki04121]
    109881888
Enzymes [BR:oki01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109881888
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109881888
SSDB
Motif
Pfam: ZnF_RZ-type zf-C3HC4 zf-C3HC4_3 zf-RING_2 AAA zf-C3HC4_4 zf-RING_UBOX AAA_5 zf-C3HC4_2 AAA_22 zf-RING_5 zf-rbx1 AAA_7 ABC_tran MCM Thyroglobulin_1 Bac_DnaA
Other DBs
NCBI-GeneID: 109881888
NCBI-ProteinID: XP_031674865
LinkDB
Position
Unknown
AA seq 3266 aa
MSSKHEPLPTYDEVLLCNSSTPYEQVELFLRRCLTAGYRGEKIYTMLYSDQLSYEVSSKV
ESFFQRIKMQSRKDYRLVIICSSDREDAYLPQPSAKLKHSTKKPSLLKCIRLIEPRVDEN
VILQSLLNTPKSKELIIFHFDVTSSVRKGLYEFLFKLLVLGYLMDSEGRMWKCSNKQLYV
IEILQSTVNLPRNGPRTNARANSTFLDVFPNVFCRPPKEVLDLEMRMREDPSFVKLRSFM
DDKEFRSEAYQRPYQYLTRFHNQIDLDTFMYNGVEGTYVECLQMLFMFCGIMDPSWAELR
NFAWFLNLQLRDCETSVFCDASFTGDTLQGFKNFVVDFMILMAKDFATPSLSISDQSPGR
QQMDLTGVSDEDLAPFRIRKRWESEPHPYIFFNDDHVSMTFIGFHLQPNEQNSVDAIDPS
TRRVIKRDIMTRELYEGLKLQRVPFNIDFDQLPRGEKIERLCNVLGXPVASDPDETYELT
TDNILKMLAIHMRFRCGIPVIIMGETGCGKTRLIKFLCELRRSGVATENMKLVKVHGGTS
SDMIYTKIREAEAIAFTNKQDYSFDSVLFFDEANTTEAISSIKEVLCDNTVEGECLVPHC
GLQIIAACNPYRKHTDEMIQRLESAGLGYRVRAEETDEKLGSIPLRQLVYRVQALPPSMI
PLVWDFGQLNDHTEKXYIQQIVQRVVETNTIDIVYTRLIADVLSASQRYMRTRKDECSFV
SLRDVERCMQAFVWFYKNHAMLLAELNQYQRNQNAERSERNQREPEARDPVLWSVVMALG
ICYHACLENKDKYRQRICKYLTETYTPFKVMQEISLMQDLLLSGVPLGETIARNNALKEN
VFMMVVCIELRIPLFLVGKPGSSKSLSKTLVADAMQGQAAHSDLYKRLKQIHLVSFQCSP
HSTPEGIINTFKQCGRFQEGKNLNEYISVVVLDEIGLAEDSPKMPLKTLHPLLEEGCIDD
EPLPHKKVGFIGISNWALDPAKMNRGIFVSRCDPDEKELIESAKGICSSDTMILEKVRDF
FQPFARAYLNICRKQGKGFFGLRDYYSLIKMVFAVTKASEQRPSAEKIVEAVLRNFSGRD
DVDAVTVFTQRLQKIQINLNLESISTIDLVRQNISAIGQEDECRYLLVLTKNYAALQILQ
QTFFSESCQPEIIFGSSFPKDQEYTQICRNINRVKICMETGRTVVLLNLQNLYESLYDAL
NQYYVCLGGQKYVDLGLGTHRVKCRVHKDFRLIVIEEKEVVYKQFPIPLINRLEKHYLDI
HTVLKEEQRAVVVELEKWVGQFVALNNQHTMAPQTYKYLPPDVFIGYHSDTCASVVLQMT
EKQRGETDISEPQRRVLDEAKLILLNCATPDSVVRLDCTVLPRVESEHLARIYFEDQKHS
SLADFIFSHTQQDEQCYSSFTEVTTFSRLLTASDVGPLEEVVNNVELLSLQQFDTEHSFL
KKISHFLTSGNGRENTSGNKILIIQSDFDEESHSANLIASAKYSAINEINKSRQVEMGGK
VFVYFITKLPRMEGGTSYVGFHGDPWRSVHIDDLRRSKDIVSDIKALRNLTISQLFEEKK
DEPEAMEVDDMYTETEQQELEHEDQTSWRSVVDTTALVRSCVQSAVGMLRDQLEGGVRST
RRVEILLTLLTDNQQIRAEFLRTVKRRLHSLLSTHDDNTLKLSSNNWVIKEASNIDALQE
GGTFRHTLWKRVQAVVIPFLAQLVSVIDRDRNLDILQDSNSGEAVKKLWLDIFGNDKLLE
VPYTKLDRNSESKTILVQNYIGLDKNIGCIMPFSWRIRDYLDELWVHALQHEGHTQGQFE
EFFRKTPLGRYISEADPEMQAEFFHRYLQDFISMTMNVTCQEDLQLLCGALTCCVNELRL
RHDDVMGKEVTSLPWVHAAYHEFKNRLQNLSRMISMEPQLAQVLRGNTHAREGDELVLDV
YAAVACVEYLEPQALDTDGQRLVWLRQVKRLQVPIELVCSEENLRHYKDRSVAMVHRVQT
GWNRVVTLSLFVEHMLLGIEEVEKKLKPLVLEHTRGLCQILEKDSDLKMKKPFEAVIGIL
KACKDGAMERIFRFGLQPCPVCMSDPHDPLSLPCDHIYCLACIRQWLVPGQMFCPLCMQA
VPDDFTLRPSEDIRVLINQNARFRKQCNAFFIDLVSTVCFKDNSPPCRAIILHLLSFLMV
EVHSVPIIRGAHRQILTKALSPFDDSVDKNPVVRSVVLKLLLKYSFDDVKDYLQQHLTAV
EQSNILEESDKNELYSLYINCLEDSMFERMQCHTVAEQQACMQDERVFLGDFLQLDAGHA
ATVEYLQQVARVRMGLDRAADLLVHMLSAAATGSQEESPNGVAAFLTSVVELCRRSGNDW
YRVYLIRKICSQRGVEFVQKLLKVADIRWLFPAEVLQQNEDGSQIDQYLVCGEDYKTIRD
AVAKAMMEGKIEGLDNACEGCKCPPQKKAVYLLLALFREVTSLYRSANDSFHPKPVQCQA
LLAFIQASKVLVSPEVRAFAQALVANRLGPLEVRPGASGAQCVVVELSVHLAAVLLCGNQ
GLLTPLQQLALLPANMQRAFLPTMPEDMLAVAHKAMGQLQWYFCPNNHPCTIGECGQPME
RSRCLDCGLEIGGDNHIAVPGFQAVQIQGDRTQTGHILGEPRRRDNLDMQDTKNMSPVPF
NLLRLVTHMAMLLGASSHPQVIGAIIKPPVPDPGAFLWAHLLKDMEQVTRSLGKGSDDTV
NTVHLVISSLLGPHQPGQWPVPYDNLLSTKEARNGWETTVSNDIITPQLKHLDRRLKEVN
AFVRADLRVSSNPVMRLVFGDPRLFLASLPRESLIHSSAVWSCRERVSLLSLTHIVEQHN
GRDTLPMLWRFLQREAELRLVKFLPDILALQRDLVKRFQNVTDLTCHTITDFLHSQKAAS
LTAWYEKRVKIFLTTWNQLRVSLATNGEIKIPGEFCREDLDLTSDFLVLLPRRQGPGLCS
TALVSYLIALHNELVYCVDKHTGEETSYTVSPADLSDLHVIRYEPERDLLPLVLSNCQYS
VERGQEALHEYDLPKIQQQILARFLQGKPLITLNGIPTLVNRHDRNYENILKDVKGKVQQ
EPLPILTLSALAGELQSYSEVCEALSTVEVALGFLAMTGGEPQLQLERYLEEVLQMGDQT
GPHILKALSRCSLKHCVALWQLLTSLKSENMLRLKRDPFVGVSEEYRNPLGDEDRRLLTT
FFTKSSADSFLLEMHEFLLLVLKSPRAPDTYRPDWGLKDTLVSYMERKDLDVPHDVDELF
PGEISLAQYIEAWKFTVAFKQERSQR
NT seq 9801 nt   +upstreamnt  +downstreamnt
atgagcagcaaacacgagccactgcccacgtacgatgaggtcctactgtgcaactcctcc
acgccttacgagcaggtggagctgttcctcagacgctgcctcactgccggctacagagga
gagaagatttacaccatgctctatagcgatcagcttagctacgaagtcagctccaaggtg
gagagctttttccagcgaattaaaatgcagagcaggaaggactacaggctcgtgatcatc
tgcagctcggacagagaggatgcctaccttcctcagccttctgcaaaactgaaacactcc
accaagaagccgtcactgctgaaatgcatccgcttgatcgagccaagggttgatgagaat
gttattcttcagtctctgctgaatacccccaagtcgaaagagctcatcatcttccacttc
gatgtcacatcttcggtgcggaaaggcctctatgagtttctctttaaactgttggtcttg
ggatatttgatggattctgagggaaggatgtggaaatgcagcaacaaacagctttatgtc
attgagatcctacagtcaacagtaaacttgcccagaaatggcccaagaacgaatgcacgt
gccaactccacattcctggatgtgttcccaaatgtcttctgccgcccaccaaaagaggtt
ctagatctggaaatgaggatgcgggaggacccctcctttgtaaagcttagatcattcatg
gatgacaaagagttcaggagtgaagcataccaacgaccctaccagtatctgacgcgtttc
cataatcaaatcgacctggacaccttcatgtacaatggggtggaaggcacctatgtagaa
tgtctacagatgctctttatgttctgtggcataatggacccatcgtgggccgagttaagg
aatttcgcatggttcctaaaccttcaactacgagactgtgagacgtcagtcttttgtgat
gcctctttcaccggggacaccctccagggattcaagaactttgtggtggacttcatgatt
ctgatggccaaggactttgccacaccgtccctcagcatctctgaccagagccccgggagg
cagcaaatggacctgactggggtcagcgatgaagacttggcacccttccggatcaggaag
agatgggagtcagaaccacatccgtacatcttcttcaacgatgaccatgtgtccatgacc
ttcattggcttccatcttcagcccaacgaacagaactctgttgacgccatcgatccatcc
acaagaagggtgatcaaaagagacatcatgaccagagagctgtatgagggtctaaagcta
cagagagtccctttcaatatcgactttgaccaactgcccagaggggagaagattgaacgc
ctttgcaatgtcttggganatccagtggcctctgatcctgatgaaacatatgagctcacc
actgacaatatactgaagatgctggccatccacatgcgtttcaggtgtggcatcccagtc
atcatcatgggggagacaggctgtgggaagacaaggctcattaaattcctatgtgagctt
aggaggagcggagtggccacggagaacatgaagctagtcaaagttcatggtggaaccagc
tcagacatgatctacaccaaaatccgggaagcagaagccattgcgttcaccaacaaacaa
gactacagctttgactctgtcctcttctttgacgaagccaataccacggaagccatcagc
agtatcaaggaagtcctctgtgataatacagtggagggagagtgtttggtgccccattgc
ggcttgcagatcatcgccgcatgcaacccttacagaaaacacactgacgagatgattcag
aggttggaatctgctggactgggatatcgagtccgagctgaagagactgatgagaagctg
ggctccatccctctccgccagttggtgtacagagtccaggccttgccccccagcatgata
cctctggtgtgggactttggccagctcaatgatcacactgaaaaantgtacatccagcag
attgtccagagggtggttgagaccaacacaattgatatagtatacaccaggttgatcgcg
gatgtcctgtctgcttcgcagaggtacatgcggacaaggaaagacgaatgtagcttcgta
agtctgagggatgtagaacgttgcatgcaagcctttgtgtggttctacaaaaaccatgcg
atgctgcttgctgagctaaatcagtatcagagaaatcaaaacgcagagaggagtgagagg
aaccagagggagccagaagcaagagacccagtcttgtggtctgtagtgatggctctggga
atatgctaccatgcctgtttggaaaacaaggacaagtacagacagagaatctgcaaatac
ctcactgaaacctacaccccattcaaagtgatgcaggagatatccctcatgcaggatctc
cttctgagcggagtgcccttgggcgaaactattgcacgaaacaacgctctgaaagagaat
gtcttcatgatggtggtctgtatagagctgagaatccccctcttcttggtggggaaacct
gggagttcaaaatctctgtctaaaaccttggtggcagacgccatgcagggccaagccgca
cactctgacctctacaaaaggcttaagcagattcacctggtgtccttccagtgcagccct
cactccacaccggagggcatcatcaacacatttaagcaatgtggtcgcttccaggagggg
aagaacctgaacgagtatatatctgtggtggtgctggatgagattggcttggctgaggat
tctcccaaaatgcccctgaaaaccctccatcctctgctagaagagggatgcatcgatgat
gagccgctaccgcacaaaaaggttggattcatcggcatctccaactgggctttggatcct
gcgaagatgaatagaggcattttcgtctcacgttgcgaccccgatgagaaagagctgatt
gagagcgctaaaggcatatgctcgtctgacacaatgattttggagaaggtcagggatttc
ttccaaccctttgccagggcctacctaaacatctgccgtaaacaagggaaaggtttcttt
ggtttgcgtgactactacagcttgatcaagatggtttttgcagtgaccaaggcttccgaa
caaaggcctagtgcagagaagattgtggaggcggtcctcaggaacttcagtggcagggac
gacgtggatgcagtcacagtcttcacccaaaggctccagaagatacagatcaacctgaat
ctggagagcatcagcaccatcgatcttgtcagacaaaacatttctgcgattggccaggag
gatgagtgccgctacttgctagttctgaccaagaactatgcagcactacagatcctgcag
cagactttcttctccgagagctgccagccagagattatcttcgggtctagcttccccaag
gaccaagagtacacccagatctgccgcaacatcaaccgagtcaagatctgcatggaaacc
ggtcgaaccgtcgttctcctgaacttgcagaacctctacgaaagtctctacgatgctctg
aaccagtactacgtctgcttgggaggacagaagtacgttgacctgggactggggacacat
cgtgtcaaatgcagagtacacaaagacttcaggctcattgtcattgaggagaaagaggtg
gtctacaaacagtttccaatccctctcatcaacaggcttgagaagcactatctggacatc
catacagttctcaaggaggaacaaagagcagttgttgtggagttggagaaatgggttggg
cagtttgtggccctcaataaccaacacaccatggccccccagacatacaagtacctacct
cctgacgttttcattggctaccattccgacacgtgtgcttcggtggtcctccaaatgaca
gagaagcaaaggggagagacagacatttccgagccccaaagaagagtcctggacgaggcc
aaactgatccttctgaactgtgccactccagactcggtggttcggctggactgcactgtt
ctccccagggtggagagtgaacatctggccaggatctactttgaggaccagaagcacagc
tctttggccgacttcatcttctctcacactcaacaggacgagcagtgctattcctccttc
acagaggtgactaccttttccagacttttaacagcatcagatgttgggccactggaagag
gtcgtgaacaatgtcgagcttctctctcttcagcagtttgacactgagcactccttcctc
aagaagatcagtcatttcctcacatctggaaatgggagagagaatacatctggcaacaaa
atcctgatcatccagtcagattttgatgaagagtcacacagtgcaaatctcattgcctcc
gccaaatattctgccatcaatgaaatcaacaaatcaagacaagtggagatgggaggcaag
gtcttcgtctacttcatcactaaattgccaagaatggaaggagggacatcctatgttgga
tttcatggagacccctggaggtcggttcatattgatgacctcagaagatcgaaagatatt
gtgtcagatatcaaagccttgagaaaccttaccatcagtcaactgtttgaggagaaaaag
gatgagcctgaagcgatggaggtagatgacatgtacactgagacagagcaacaggaattg
gaacatgaagaccaaacaagctggaggagtgttgtggacaccacggcgctggtacgtagc
tgtgtgcagagcgcagtgggcatgctcagagaccagctggagggtggagtccgtagtacc
aggagagtggagatcctgctcacactcctgactgacaaccaacaaataagagctgaattt
ctgaggaccgtgaagagacgtcttcactcgttgctgtcgacccatgatgacaacacgctc
aaactgtcctcaaataactgggtcatcaaggaggcgtccaacattgacgcactgcaggaa
ggagggacattcagacacaccctatggaaaagggtgcaggctgtggttattcccttcttg
gcccagctggtctctgtcatcgaccgcgaccgcaacctggacattctgcaggactccaac
tctggagaggcggttaagaaactctggttggacatctttgggaacgacaaactactcgag
gttccctacacaaaactggaccgcaattcagagtcaaagaccatcctggtccagaactac
attgggctggacaagaacatcggctgtatcatgcccttcagctggaggatcagggactac
ctggatgaactctgggtccatgctctccagcatgaaggtcacactcagggccagtttgag
gagttctttaggaagaccccactgggccgctacatctcagaggcagacccggagatgcag
gctgagttcttccacaggtacctgcaggatttcatctccatgaccatgaatgtgacctgt
caggaggatctgcagctcctttgcggtgccttgacctgttgtgtgaacgagctgcggctg
cgtcacgatgacgtcatggggaaggaagtgacctcgctgccttgggtccacgctgcctac
catgagtttaagaaccgcctgcagaacctgtccaggatgataagcatggagccccagttg
gcccaggtcctccgggggaacacacatgccagagagggggatgaactggtgctggacgtg
tatgcggccgtggcctgtgtagagtacctggagccccaggctctggacacagacggccag
cggctggtctggctcagacaggtcaagaggctccaggtccccatcgagctggtctgctcc
gaggagaatctgagacactataaggacaggagcgtggccatggtccacagagttcagact
gggtggaaccgcgtcgtcaccctgtctctgtttgtggagcacatgttactgggcatcgag
gaggtggagaagaagctgaagcctctggtcttggagcacaccagagggttgtgccagatc
ctggagaaggactctgacctgaaaatgaagaagccgtttgaggcggtgatcggtatactg
aaagcctgcaaagacggagcaatggagcgcattttcaggtttggcctccagccgtgccct
gtgtgtatgagcgacccccatgaccccctgagcctgccgtgtgaccacatctactgcctg
gcctgcatcagacagtggctggtcccaggtcagatgttctgtcctctctgcatgcaggct
gtgccagacgacttcactctcaggccctctgaagacataagagttctcatcaaccagaac
gcccgcttcaggaagcagtgcaacgccttcttcatagacctggtctcaacagtgtgcttc
aaggacaactctcccccctgcagggccatcatcctccacctgctctccttcctcatggtg
gaggtccactctgtgcccatcatcagaggtgctcatcgtcagattctgaccaaggccctc
tctccctttgacgactccgttgacaaaaacccagtagtacggtcggttgttctcaaactc
ctgctcaaatacagctttgatgacgtgaaagactacctgcagcagcacctgacagcagtt
gaacagagcaacatcttggaggaatcagacaagaatgaactgtattctctgtatatcaac
tgtctggaggattccatgtttgagcggatgcagtgccacacggtggcggagcagcaggcc
tgcatgcaggatgagagggtcttcctgggagacttcctgcagttggatgccggacacgca
gccaccgtagagtacctgcagcaggtggccagggtgcgcatggggctggacagagctgca
gacctgctggtccacatgctgtctgctgctgccacaggatcgcaggaggagtctcctaac
ggcgttgcggccttcctgaccagcgtggtagaactgtgtagacgcagcgggaacgactgg
taccgggtctacctcatccgtaagatctgcagccagcgcggcgtggagtttgttcagaaa
ctcctgaaggtggctgacatccggtggttgttccctgctgaagttctgcagcagaatgaa
gatggcagccagatagaccaatatcttgtgtgtggagaggattacaagacaatccgagat
gctgttgccaaggcaatgatggaaggcaaaatcgagggattggacaacgcttgtgagggc
tgtaaatgtcctccacagaagaaagcagtctacctgctcctggccctgttcagagaagtc
acctctctctacagatcagccaatgacagcttccatcctaaacctgtgcaatgccaggcc
ctgttggcgttcatccaggcctccaaggtgttggtcagcccagaggtgagggccttcgcc
caggccctggtggccaaccggctggggcccctggaagtccgtcccggggcctctggggcc
cagtgtgtggtagtggagctgagcgtccacctggctgcagtgctgctctgtgggaaccag
ggtctactgacgcccctccagcagctggccctactgcctgccaacatgcagagagccttc
ctccccacaatgccagaggacatgctagcagtggctcacaaagctatggggcagctgcag
tggtacttttgtcccaacaatcacccgtgcaccatcggtgagtgtggccagcccatggag
aggagtcgctgcctggactgtggccttgagattggaggggacaaccacatagctgtccct
ggcttccaagccgttcagattcagggtgaccgcacccagaccggccacatcctgggagag
cccagacggagagacaacctggacatgcaggacaccaagaacatgtccccagtgcccttt
aacctgctgcgcctggtcacacacatggccatgctgctgggggccagcagtcacccccag
gtcatcggtgccatcatcaagcccccagtgcccgaccccggtgcgttcctgtgggcccac
ctgttgaaggacatggagcaggtgaccaggtcgctggggaaggggtctgacgacacggtc
aacaccgtccatctggtcatcagcagccttctggggccccaccagcctggccagtggcct
gttccctatgacaacctgctctccaccaaggaggcccgaaacggctgggagaccaccgtc
agcaatgacatcatcacacctcagctgaagcacctggacaggcggctgaaggaagtgaac
gcctttgtccgggccgacttgcgggtctcctccaaccctgtgatgaggctggtgttcggg
gacccgcgcctcttccttgcctctctgccccgggagtctctgatccacagttcggctgtg
tggagctgcagggagcgggtgtctctactcagcctcacccacatcgtggagcagcacaac
ggcagggacaccctgcccatgctctggcggttcctgcagagggaggcagagctgcggttg
gtgaagttccttcctgacatcctggcactgcagagagatttggtgaagaggttccagaac
gtgactgacctcacctgccataccatcactgacttccttcacagccagaaagcagcctcc
ctcacagcctggtacgagaaacgggtcaaaatcttcctgacaacatggaatcagctccgg
gtctccctggcaaccaacggtgagattaaaatccctggcgagttctgccgggaggacctg
gacctgaccagtgacttcctggttctgttgccacggcgacagggtcccggcctgtgttcc
acggcgctggtcagctacctcatcgccctgcacaacgaactggtctactgcgtggacaag
catactggggaggagaccagctacacggtgagcccggcggacctgagcgacctgcacgtg
atccgctacgagccggagagggatctgctgcccttggttctgtccaactgccagtacagt
gtggagcgtggccaggaggccctgcatgagtacgacctgcccaagatccagcagcagatc
ctggcccgcttcctgcagggaaagcctctcatcactctcaacggaatcccaaccctggtg
aacagacacgaccgcaattatgaaaacatcctcaaggatgtgaaaggaaaggttcaacag
gagcccctgcccatcctgaccctgtcggcgctggccggggagctgcagtcatacagcgag
gtgtgtgaggcgctctccaccgtggaggtggctctgggcttcctggccatgacgggaggc
gagccccagctgcagttggagcgctacctggaggaggttctgcagatgggagaccagact
ggcccacacatcctaaaggccctgagcaggtgtagtctgaaacactgtgtggccctgtgg
cagctcctcacctcactcaagtctgagaacatgctgcgcctcaagagggacccgtttgtg
ggggtctcagaggaatacaggaatcccctgggagatgaagaccggaggctactcactacg
ttcttcaccaagagcagcgctgactcgttcctgctggagatgcacgagtttctgctgctg
gtcctgaagagcccccgtgcccccgacacatacaggcctgactggggcctgaaagacacc
ctggtgtcctacatggagcggaaagaccttgacgttccccacgacgtggacgagttgttc
cccggagagatcagtctggctcagtacatagaagcctggaagttcaccgtggccttcaaa
caggagcgcagccagagatag

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